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Cucsat.G4806 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4806
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Genome locationctg1227:3941683..3945649
RNA-Seq ExpressionCucsat.G4806
SyntenyCucsat.G4806
Gene Ontology termsGO:0009451 - RNA modification (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN44739.2 hypothetical protein Csa_016351, partial [Cucumis sativus]2.71e-5393.33Show/hide
Query:  PELLVYQITEKGELTASRENVFEQWSEVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHFLPMVLTCNNLSQVHNRFLGFSPTILNK
        PELLV QITEKGELT SRENVF QW EVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHF PMVLTCNN SQVHNRFLGFSPTILNK
Subjt:  PELLVYQITEKGELTASRENVFEQWSEVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHFLPMVLTCNNLSQVHNRFLGFSPTILNK
TrEMBL top hitse value%identityAlignment
A0A0A0K461 Uncharacterized protein3.01e-5387.76Show/hide
Query:  GISF--LDPELLVYQITEKGELTASRENVFEQWSEVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHFLPMVLTCNNLSQVHNRFLGFSPTILNK
         +SF  +D ELLV QITEKGELT SRENVF QW EVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHF PMVLTCNN SQVHNRFLGFSPTILNK
Subjt:  GISF--LDPELLVYQITEKGELTASRENVFEQWSEVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHFLPMVLTCNNLSQVHNRFLGFSPTILNK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CATCTTCCTTCGATCTTCGTCACCGCGAAAGCAAGAGGGATCAGTTTTCTCGACCCTGAACTGTTGGTTTACCAAATTACCGAAAAGGGAGAACTAACTGCCAGCAGAGA
AAATGTCTTTGAGCAATGGAGTGAAGTCATGTGCAAAGCTGCTGAAGTCTTCAGAACCATTGTTGGTGAAATCAGGTTTTGTTACTTTATTAGCTGGCAATTTAGAATTA
CTTTACCTTATGTATTACACTTTCTTCCTATGGTCTTAACTTGCAACAATCTTTCTCAAGTTCATAATAGATTTCTAGGATTTTCTCCAACAATTTTAAATAAATAA
mRNA sequenceShow/hide mRNA sequence
CATCTTCCTTCGATCTTCGTCACCGCGAAAGCAAGAGGGATCAGTTTTCTCGACCCTGAACTGTTGGTTTACCAAATTACCGAAAAGGGAGAACTAACTGCCAGCAGAGA
AAATGTCTTTGAGCAATGGAGTGAAGTCATGTGCAAAGCTGCTGAAGTCTTCAGAACCATTGTTGGTGAAATCAGGTTTTGTTACTTTATTAGCTGGCAATTTAGAATTA
CTTTACCTTATGTATTACACTTTCTTCCTATGGTCTTAACTTGCAACAATCTTTCTCAAGTTCATAATAGATTTCTAGGATTTTCTCCAACAATTTTAAATAAATAA
Protein sequenceShow/hide protein sequence
HLPSIFVTAKARGISFLDPELLVYQITEKGELTASRENVFEQWSEVMCKAAEVFRTIVGEIRFCYFISWQFRITLPYVLHFLPMVLTCNNLSQVHNRFLGFSPTILNK