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Cucsat.G4978 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G4978
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptioncentriolin-like
Genome locationctg1227:1183104..1183672
RNA-Seq ExpressionCucsat.G4978
SyntenyCucsat.G4978
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585310.1 hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sororia]6.09e-2245.77Show/hide
Query:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE
        P+STQTL  KL +S++       QCL LQSKLN       +A+ EA ++AQGLKKAIE+N  L +E S L ++LK +K   ++GK  +  A+E + R  +
Subjt:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE

Query:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM
        L  E   L  DLNFFK Q+QM+KF F+ MEE L+E+ L+ L+
Subjt:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM

KAG7020228.1 hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyrosperma]1.46e-2246.48Show/hide
Query:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE
        P+STQTL  KL +S++       QCL LQSKLN       +A+ EA ++AQGLKKAIE+N  L +E S L ++LK +K   ++GK  +  A+E + R  +
Subjt:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE

Query:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM
        L  E   L  DLNFFK Q+QM+KF F+ MEE L+E+AL+ L+
Subjt:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM

XP_022131622.1 uncharacterized protein LOC111004753 [Momordica charantia]1.14e-2349.31Show/hide
Query:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE
        P+S  TLE KL++S++       QCL LQSKLN       S+K EAKL+AQ LKKAIE+N  L EE S L  + K LK F NK K  +DRA E   RV E
Subjt:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE

Query:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK
        LE+E+  L  DL FF+ Q+Q +KF  S MEE L++S L+  +G+
Subjt:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK

XP_023538594.1 uncharacterized protein LOC111799313 [Cucurbita pepo subsp. pepo]1.97e-1547.37Show/hide
Query:  LNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM
        ++AQGLKKAIE+N  L +E S L ++LK +K   +KG+  +  A++ + R  +L  E   L  DLNFFK QHQM+KF F+ MEE L+E+AL+ L+
Subjt:  LNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM

XP_038885825.1 uncharacterized protein LOC120076121 [Benincasa hispida]1.56e-3571.29Show/hide
Query:  EEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMG
        EEAKLNAQGLKKAIE+N+ L EE S LVE+ K +K F+N+GK  LDRA+ETQ+RVHELE EVE LKLDL FFK QHQM KFQF+ MEE L+ESALS+L+G
Subjt:  EEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMG

Query:  K
        +
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A068VJT0 Uncharacterized protein1.11e-1137.65Show/hide
Query:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRIL------------REERSCLV--EELKTLKDFINKGKS
        P+STQTL+SKL +++       +Q L LQSKL         A+ EA LNAQ LKK +E+N+ L            R ER C +   + + L DF   G  
Subjt:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRIL------------REERSCLV--EELKTLKDFINKGKS

Query:  TLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKF----QFSHMEEALIESALSKLMGK
          +RA+E ++RVHELE EV+ L  +L  +KYQ+  Q      + +  E+ L+ES L+  +GK
Subjt:  TLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKF----QFSHMEEALIESALSKLMGK

A0A6J1BRI9 uncharacterized protein LOC1110047535.54e-2449.31Show/hide
Query:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE
        P+S  TLE KL++S++       QCL LQSKLN       S+K EAKL+AQ LKKAIE+N  L EE S L  + K LK F NK K  +DRA E   RV E
Subjt:  PISTQTLESKLLSSQS-------QCLFLQSKLN-------SAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHE

Query:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK
        LE+E+  L  DL FF+ Q+Q +KF  S MEE L++S L+  +G+
Subjt:  LEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK

A0A6J1GIQ2 uncharacterized protein LOC1114545509.54e-1647.37Show/hide
Query:  LNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM
        ++AQGLKKAIE+N  L +E S L ++LK +K   ++GK  +   +E + R  +L  E   L  DLNFFK QHQM+KF F+ MEE L+E+AL+ L+
Subjt:  LNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLM

A0A6P6UKZ0 centriolin-like3.94e-1137.04Show/hide
Query:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRIL------------REERSCLV--EELKTLKDFINKGKS
        P+STQTL+ KL +++       +Q L LQSKL         A+ EA LNAQ LKK +E+N+ L            R ER C +   + + L DF   G  
Subjt:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRIL------------REERSCLV--EELKTLKDFINKGKS

Query:  TLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKF----QFSHMEEALIESALSKLMGK
          +RA+E ++RVHELE EV+ L  +L  +KYQ+  Q      + +  E+ L+ES L+  +GK
Subjt:  TLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKF----QFSHMEEALIESALSKLMGK

A0A6P6USV6 centriolin-like4.25e-1237.65Show/hide
Query:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRIL------------REERSCLV--EELKTLKDFINKGKS
        P+STQTL+ KL +++       +Q L LQSKL         A+ EA LNAQ LKK +E+N+ L            R ER C +   + + L DF   G  
Subjt:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRIL------------REERSCLV--EELKTLKDFINKGKS

Query:  TLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKF----QFSHMEEALIESALSKLMGK
          +RA+E ++RVHELE EV+ L  +L F+KYQ+  Q      + +  E+ L+ES L+  +GK
Subjt:  TLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKF----QFSHMEEALIESALSKLMGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G14680.1 unknown protein1.3e-0529.68Show/hide
Query:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRILREERSCLVEELK-----------TLKDFINKGKSTLD
        PIS   L+ KL +++        Q L L S+L          + EA +NAQ LKK +E+N+ L  ER  LV + K             +  +  G  T +
Subjt:  PISTQTLESKLLSSQ-------SQCLFLQSKLNS-------AKEEAKLNAQGLKKAIEQNRILREERSCLVEELK-----------TLKDFINKGKSTLD

Query:  RARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK
        RARE + RV ELE+EV  +  ++          K +    E+ L++S L+  + K
Subjt:  RARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK

AT4G09060.1 unknown protein3.8e-0529.94Show/hide
Query:  PISTQTLESKL---------LSSQSQCLFLQSK-----LNSAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKD-----------FINKGKSTLD
        PIS ++L+ KL         L  Q Q L  + K     ++  + EA +NAQ LKK +E+N+ L  E   L+ + K L+             +  G  + +
Subjt:  PISTQTLESKL---------LSSQSQCLFLQSK-----LNSAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKD-----------FINKGKSTLD

Query:  RARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQ--FSHMEEALIESALSKLMGK
        RARE + RV ELE E+  +  ++  FK Q    + +   + +EE L++S L  L+ K
Subjt:  RARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQ--FSHMEEALIESALSKLMGK

AT4G09060.2 unknown protein2.5e-0431.01Show/hide
Query:  PISTQTLESKL---------LSSQSQCLFLQSK-----LNSAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKD-----------FINKGKSTLD
        PIS ++L+ KL         L  Q Q L  + K     ++  + EA +NAQ LKK +E+N+ L  E   L+ + K L+             +  G  + +
Subjt:  PISTQTLESKL---------LSSQSQCLFLQSK-----LNSAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKD-----------FINKGKSTLD

Query:  RARETQIRVHELEKEVEILKLDLNFFKYQ
        RARE + RV ELE E+  +  ++  FK Q
Subjt:  RARETQIRVHELEKEVEILKLDLNFFKYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTTTGAACATAAAATCAGCAAACACAATCGTCTTCCTCCGACCCATCCATTTCTCAAAATTTTCCAATTCCCAACAAAAAGAAAAATGAGTGTTCCTCAAGAACCAAT
TTCTACACAAACACTTGAATCCAAACTCCTCTCTTCTCAGTCCCAATGCCTCTTTTTACAATCTAAATTAAACAGTGCCAAGGAAGAAGCGAAACTGAATGCACAAGGCT
TGAAGAAGGCAATTGAACAGAACCGAATACTGAGGGAAGAGCGTTCATGTTTGGTTGAAGAATTGAAGACGTTGAAAGACTTTATTAACAAAGGAAAATCAACTCTTGAT
CGTGCTCGAGAAACCCAAATTCGTGTCCATGAATTGGAAAAAGAAGTTGAAATTTTAAAATTGGATTTGAATTTCTTCAAGTATCAACACCAAATGCAAAAGTTTCAATT
TTCACATATGGAAGAAGCTTTGATTGAGTCCGCTTTATCTAAATTAATGGGAAAA
mRNA sequenceShow/hide mRNA sequence
ATCTTTGAACATAAAATCAGCAAACACAATCGTCTTCCTCCGACCCATCCATTTCTCAAAATTTTCCAATTCCCAACAAAAAGAAAAATGAGTGTTCCTCAAGAACCAAT
TTCTACACAAACACTTGAATCCAAACTCCTCTCTTCTCAGTCCCAATGCCTCTTTTTACAATCTAAATTAAACAGTGCCAAGGAAGAAGCGAAACTGAATGCACAAGGCT
TGAAGAAGGCAATTGAACAGAACCGAATACTGAGGGAAGAGCGTTCATGTTTGGTTGAAGAATTGAAGACGTTGAAAGACTTTATTAACAAAGGAAAATCAACTCTTGAT
CGTGCTCGAGAAACCCAAATTCGTGTCCATGAATTGGAAAAAGAAGTTGAAATTTTAAAATTGGATTTGAATTTCTTCAAGTATCAACACCAAATGCAAAAGTTTCAATT
TTCACATATGGAAGAAGCTTTGATTGAGTCCGCTTTATCTAAATTAATGGGAAAA
Protein sequenceShow/hide protein sequence
IFEHKISKHNRLPPTHPFLKIFQFPTKRKMSVPQEPISTQTLESKLLSSQSQCLFLQSKLNSAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLD
RARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK