CuGenDBv2

Gene ID	Cucsat.G5038
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	selenoprotein H
Genome location	ctg1227:2356472..2360799
RNA-Seq Expression	Cucsat.G5038
Synteny	Cucsat.G5038
Gene Ontology terms	GO:0005794 - Golgi apparatus (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8652181.1 hypothetical protein Csa_022241 [Cucumis sativus]

1.75e-112

100

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

XP_004138763.1 selenoprotein H [Cucumis sativus]

1.23e-113

100

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

XP_008445096.1 PREDICTED: selenoprotein H [Cucumis melo]

2.56e-106

94.19

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

XP_023536837.1 selenoprotein H-like [Cucurbita pepo subsp. pepo]

5.20e-84

77.27

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAP+KR+K QE++    KP PA+SR TR S RLAANSKADLTV E    LPK KKAKRAPKENGK EEVEN+   +D    KL  +AK+R VVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        QSFKKRAI+VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

XP_038886764.1 selenoprotein H [Benincasa hispida]

7.27e-91

82.39

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAPRKR+KNQE++   EK APA+SR+TRSSARLAANSKAD  V    TE  KSKKAKRAPKENGKV+EVEN+ V+VD  L KLDKD K+RTVVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        QSFKKRAIQVQ GLENGVPGITV+LNPD PRRGCFEIRSEDGEKFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPC9 Uncharacterized protein

5.96e-114

100

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

A0A1S3BBW1 selenoprotein H

1.24e-106

94.19

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK
        MAPRKR+KNQEE+  +EKPAPATSR+TRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGL K DKDAKSRTVVIEHCKQCQSFK
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFK

Query:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDG+KFISLLDMKRPFTRMKEL+MDEVISDIIEKIKG
Subjt:  KRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

A0A6J1GHF7 selenoprotein H-like isoform X1

1.45e-83

76.14

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAP+KR+K QE++  V KP PA+SR+TR S RLA NSKADLTV E    LPK KKAKR PKENGK EEVEN+   +D    KL  +AK+R VVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        QSFKKRA++VQ GLE GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKEL+M+EVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

A0A6J1K9R2 selenoprotein H-like

7.61e-82

75.42

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Query:  MAPRKRTKNQEEDLVV---EKPAPATSRLTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHC
        MAPRKR+KNQE+       EKPAP +S +TR S RLA NS ADL V    TELPKSKK KRAPKENGK +EV N+  ++D    KL KDAK+RTVVIE C
Subjt:  MAPRKRTKNQEEDLVV---EKPAPATSRLTRSSARLAANSKADLTV----TELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHC

Query:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        KQCQSFKKRAIQVQ+GLENGV GITVLLNP+KPR+GCFEIRS+DGEKFISLLDMKRPFTRMKELNM+EVISDIIEKIKG
Subjt:  KQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

A0A6J1KP64 selenoprotein H-like isoform X1

1.14e-80

74.43

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Query:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC
        MAP+KR+K QE++    KP P +SR+TR S RLAANSKADLTV E    LPK KKAKRAPKEN K EEVEN+   +D    KL  +AK+R VVIEHCKQC
Subjt:  MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTE----LPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQC

Query:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG
        QSFKKRA++VQ GLE GVPGITVLLNPDK RRGCFEIRSEDGEKFISLLDMKRPFT+MKEL+M+EVISDIIEKIKG
Subjt:  QSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

SwissProt top hits

e value

%identity

Alignment

Q3UQA7 Selenoprotein H

4.6e-06

32.61

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Query:  KLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI---RSEDGEKFISLLDMKRPFTRMKELNMDEVISDI
        K +K A+  TVVIEHC   + + + A  +   L+   P + V +NP KPRRG FE+   RS++    +     K P  ++K     EV+ ++
Subjt:  KLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEI---RSEDGEKFISLLDMKRPFTRMKELNMDEVISDI

Arabidopsis top hits

e value

%identity

Alignment

AT2G24440.1 selenium binding

5.4e-34

53.46

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Query:  RLTRSSARLAANSKADLTVTELPKSKKAKR-------APKENGKVEEV-----ENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLEN
        R TRS  +    S + L   E P+ KK K        A K+  K EEV     + +E   D    + D D+  + +VIEHCKQC+SFK+RA +V+ GLE 
Subjt:  RLTRSSARLAANSKADLTVTELPKSKKAKR-------APKENGKVEEV-----ENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGLEN

Query:  GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK
         VPGI V +NPDKPRRGCFEIR E GE FISLL MKRPFT MKELNM+EVI+DI+EKIK
Subjt:  GVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK

AT4G31360.1 selenium binding

5.9e-33

47.85

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Query:  PRKRTKNQEEDLVVEKPAPATSRLTRS------SARLAANSKADLTVTELPKSKKAKR--------APKENGKVEEVENKEVKVDVGLGKLDKDAKSRT-
        P K++K   E+        A+SR+TRS      S      +KA  + T+ P +KKAKR          K+  K EEVE  E  V+  + K + + +  T 
Subjt:  PRKRTKNQEEDLVVEKPAPATSRLTRS------SARLAANSKADLTVTELPKSKKAKR--------APKENGKVEEVENKEVKVDVGLGKLDKDAKSRT-

Query:  --VVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK
          +VIEHCKQC +FK RAIQV+  LE  VPG+TV LNP+KPRRGCFEIR E G+ FISLL+MKRPF  MK L+M+EVI DII+K+K
Subjt:  --VVIEHCKQCQSFKKRAIQVQTGLENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIK

Sequences

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CDS sequence

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ATGGCGCCCAGGAAGCGAACCAAGAACCAAGAAGAAGACCTGGTGGTGGAGAAGCCGGCCCCGGCGACGTCCAGATTGACTCGGAGTTCCGCTCGCCTGGCGGCGAACTC
CAAGGCCGATTTGACTGTCACGGAGTTGCCGAAGAGTAAGAAGGCGAAACGTGCTCCGAAGGAGAATGGGAAGGTTGAGGAGGTTGAAAATAAGGAAGTGAAAGTTGATG
TTGGTTTGGGGAAACTTGACAAGGATGCGAAGAGTAGAACGGTTGTGATTGAACATTGCAAACAGTGCCAATCATTCAAGAAAAGGGCCATTCAGGTGCAAACTGGTCTA
GAGAATGGTGTTCCTGGAATTACTGTGCTGCTTAACCCTGATAAGCCAAGAAGGGGTTGCTTTGAAATCCGAAGCGAAGATGGGGAGAAGTTTATCAGTCTTCTGGACAT
GAAGCGTCCATTTACCCGCATGAAGGAACTGAACATGGATGAAGTCATTTCAGATATCATTGAGAAGATAAAAGGATGA

mRNA sequence

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Protein sequence

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MAPRKRTKNQEEDLVVEKPAPATSRLTRSSARLAANSKADLTVTELPKSKKAKRAPKENGKVEEVENKEVKVDVGLGKLDKDAKSRTVVIEHCKQCQSFKKRAIQVQTGL
ENGVPGITVLLNPDKPRRGCFEIRSEDGEKFISLLDMKRPFTRMKELNMDEVISDIIEKIKG

Cucsat.G5038 (gene) of Cucumber (B10) v3 genome