CuGenDBv2

Gene ID	Cucsat.G5090
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	DEAD-box ATP-dependent RNA helicase FANCM isoform X2
Genome location	ctg1227:3498118..3500539
RNA-Seq Expression	Cucsat.G5090
Synteny	Cucsat.G5090
Gene Ontology terms	GO:0006281 - DNA repair (biological process) GO:0032508 - DNA duplex unwinding (biological process) GO:0003677 - DNA binding (molecular function) GO:0005524 - ATP binding (molecular function) GO:0016787 - hydrolase activity (molecular function) GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domains	IPR039686 - FANCM/Mph1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8652234.1 hypothetical protein Csa_022145 [Cucumis sativus]

0.0

99.45

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
        MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ

Query:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP
        TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLL+FSEP
Subjt:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP

Query:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
        GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
Subjt:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR

Query:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
        LTNLIESGFVPDSPI+DCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
Subjt:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE

Query:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
        IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
Subjt:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS

Query:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
Subjt:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

XP_011649875.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Cucumis sativus]

0.0

99.45

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
        MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ

Query:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP
        TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLL+FSEP
Subjt:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP

Query:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
        GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
Subjt:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR

Query:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
        LTNLIESGFVPDSPI+DCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
Subjt:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE

Query:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
        IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
Subjt:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS

Query:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
Subjt:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

XP_031736809.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X4 [Cucumis sativus]

0.0

99.45

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
        MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ

Query:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP
        TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLL+FSEP
Subjt:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP

Query:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
        GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
Subjt:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR

Query:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
        LTNLIESGFVPDSPI+DCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
Subjt:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE

Query:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
        IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
Subjt:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS

Query:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
Subjt:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

XP_031736810.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucumis sativus]

0.0

99.45

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
        MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ

Query:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP
        TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLL+FSEP
Subjt:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP

Query:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
        GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
Subjt:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR

Query:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
        LTNLIESGFVPDSPI+DCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
Subjt:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE

Query:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
        IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
Subjt:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS

Query:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
Subjt:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

XP_031736811.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Cucumis sativus]

0.0

99.45

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
        MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ

Query:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP
        TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLL+FSEP
Subjt:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP

Query:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
        GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
Subjt:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR

Query:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
        LTNLIESGFVPDSPI+DCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
Subjt:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE

Query:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
        IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
Subjt:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS

Query:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
Subjt:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQJ7 Helicase C-terminal domain-containing protein

0.0

99.45

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
        MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQ

Query:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP
        TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTID+IGSGSKLL+FSEP
Subjt:  TFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEP

Query:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
        GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR
Subjt:  GSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPR

Query:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
        LTNLIESGFVPDSPI+DCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE
Subjt:  LTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADE

Query:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
        IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS
Subjt:  IQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSS

Query:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
Subjt:  DATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

A0A1S3B3H7 Fanconi anemia group M protein isoform X2

0.0

93.17

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF
        MKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI SFKNKLTDTET+LLLKYFHPCDDAWRPSLIAFPHF
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF

Query:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE
        QTFPSRTHGVLHS RTMVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLLS SE
Subjt:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE

Query:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP
        PGSYCVRTAQDLIVPTEAV ++TTSQTKILPDE FPSPETDCVPVLEDKAMNLIE NHQNT LKR FFNKDTVDEKLVLEIEPQFTPADE  ITETQLSP
Subjt:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP

Query:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD
        RLTNLIESGFVPDSPI+DCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +AD
Subjt:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD

Query:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS
        EIQTPLA IASSCDNEVWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVS
Subjt:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS

Query:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        SDAT+SGDEDD IKSS DSFIDDRV+ASASSTQD TSKPDMM
Subjt:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

A0A1S4DTZ2 Fanconi anemia group M protein isoform X5

0.0

93.17

Show/hide

Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF
        MKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI SFKNKLTDTET+LLLKYFHPCDDAWRPSLIAFPHF
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF

Query:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE
        QTFPSRTHGVLHS RTMVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLLS SE
Subjt:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE

Query:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP
        PGSYCVRTAQDLIVPTEAV ++TTSQTKILPDE FPSPETDCVPVLEDKAMNLIE NHQNT LKR FFNKDTVDEKLVLEIEPQFTPADE  ITETQLSP
Subjt:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP

Query:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD
        RLTNLIESGFVPDSPI+DCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +AD
Subjt:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD

Query:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS
        EIQTPLA IASSCDNEVWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVS
Subjt:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS

Query:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        SDAT+SGDEDD IKSS DSFIDDRV+ASASSTQD TSKPDMM
Subjt:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

A0A1S4DUR1 Fanconi anemia group M protein isoform X3

0.0

93.17

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Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF
        MKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI SFKNKLTDTET+LLLKYFHPCDDAWRPSLIAFPHF
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF

Query:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE
        QTFPSRTHGVLHS RTMVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLLS SE
Subjt:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE

Query:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP
        PGSYCVRTAQDLIVPTEAV ++TTSQTKILPDE FPSPETDCVPVLEDKAMNLIE NHQNT LKR FFNKDTVDEKLVLEIEPQFTPADE  ITETQLSP
Subjt:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP

Query:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD
        RLTNLIESGFVPDSPI+DCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +AD
Subjt:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD

Query:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS
        EIQTPLA IASSCDNEVWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVS
Subjt:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS

Query:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        SDAT+SGDEDD IKSS DSFIDDRV+ASASSTQD TSKPDMM
Subjt:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

A0A5A7T298 Fanconi anemia group M protein isoform X6

0.0

93.17

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Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF
        MKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI SFKNKLTDTET+LLLKYFHPCDDAWRPSLIAFPHF
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHF

Query:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE
        QTFPSRTHGVLHS RTMVLI+TMQHLQGLHFSRESESFS+AQS NEVN SKAELE PLVYPEVSLPQNSAENNCIS CCSPKHSTIDL+GSGSKLLS SE
Subjt:  QTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSE

Query:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP
        PGSYCVRTAQDLIVPTEAV ++TTSQTKILPDE FPSPETDCVPVLEDKAMNLIE NHQNT LKR FFNKDTVDEKLVLEIEPQFTPADE  ITETQLSP
Subjt:  PGSYCVRTAQDLIVPTEAVIKQTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSP

Query:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD
        RLTNLIESGFVPDSPI+DCGYSRQRISESAKSQ ILPAQVDGLQLLNSSSSGINEMINCN GFCAGN IFLASSEGQSSALKDNESVGIKSHAPTS +AD
Subjt:  RLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMAD

Query:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS
        EIQTPLA IASSCDNEVWDSVNGEKFSS+PKPHKFKRLRKVGDMKKNEN+ESMAKTSISPLGNMVGTFSSTRQFK+KKRDGER+FDDNVKAFIEEEAEVS
Subjt:  EIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVS

Query:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM
        SDAT+SGDEDD IKSS DSFIDDRV+ASASSTQD TSKPDMM
Subjt:  SDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

SwissProt top hits

e value

%identity

Alignment

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM

9.9e-55

32.27

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Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYF-HPCDDAWRPSLIAFPH
        M+KQA+ ++IKKHM+NGG NSFNFH S RMIPH  +PEVQ V+ SIKQFV  GKK+++++A +  +F+ KLT  ET +L KY+ +P ++  R SLIAFPH
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYF-HPCDDAWRPSLIAFPH

Query:  FQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSV------------------------AQSINEVNASKAELEVPLVYPEVSLPQNSAENNCI
        FQT PS+ H V+HS +T +LID MQHLQ   FS +S+SF                            S+ ++  + ++ +   V    S  + + ++   
Subjt:  FQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSV------------------------AQSINEVNASKAELEVPLVYPEVSLPQNSAENNCI

Query:  SGCCSPKH--------STIDLIG-----------------SGSKLLSFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKI-LPDEFFPSPETDCVPVLEDK
        S   SP H        +++D +G                 S +  L  +E    C  T+   +VP +   K         L + F P           D 
Subjt:  SGCCSPKH--------STIDLIG-----------------SGSKLLSFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKI-LPDEFFPSPETDCVPVLEDK

Query:  AMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFT-PADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNS
        A   +ET   ++L+KR   N   V E  V     +    +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        S
Subjt:  AMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFT-PADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNS

Query:  SSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKK
        S         CN          L + + +       E + +      SP+ ++ +TPLA  T  +S   + W   +GEK  ++ +P K KRLR++GD   
Subjt:  SSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKK

Query:  NENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMM
             S  K +   +       S +R  K  +   +   DD+V+ FI+EEAEVSS A +S DE++++   S  DSFIDD    +A +TQ  + K DMM
Subjt:  NENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMM

Arabidopsis top hits

e value

%identity

Alignment

AT1G35530.1 DEAD/DEAH box RNA helicase family protein

8.9e-43

30.28

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Query:  IPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYF-HPCDDAWRPSLIAFPHFQTFPSRTHGVLHSCRTMVLIDTMQHLQGL
        IPH  +PEVQ V+ SIKQFV  GKK+++++A +  +F+ KLT  ET +L KY+ +P ++  R SLIAFPHFQT PS+ H V+HS +T +LID MQHLQ  
Subjt:  IPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYF-HPCDDAWRPSLIAFPHFQTFPSRTHGVLHSCRTMVLIDTMQHLQGL

Query:  HFSRESESFSV------------------------AQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKH--------STIDLIG-------
         FS +S+SF                            S+ ++  + ++ +   V    S  + + ++   S   SP H        +++D +G       
Subjt:  HFSRESESFSV------------------------AQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKH--------STIDLIG-------

Query:  ----------SGSKLLSFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKI-LPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVL
                  S +  L  +E    C  T+   +VP +   K         L + F P           D A   +ET   ++L+KR   N   V E  V 
Subjt:  ----------SGSKLLSFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKI-LPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVL

Query:  EIEPQFT-PADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQS
            +    +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        SS         CN          L + + + 
Subjt:  EIEPQFT-PADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQS

Query:  SALKDNESVGIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK
              E + +      SP+ ++ +TPLA  T  +S   + W   +GEK  ++ +P K KRLR++GD        S  K +   +       S +R  K 
Subjt:  SALKDNESVGIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKK

Query:  KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMM
         +   +   DD+V+ FI+EEAEVSS A +S DE++++   S  DSFIDD    +A +TQ  + K DMM
Subjt:  KKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRVNASASSTQDGTSKPDMM

AT1G35530.2 DEAD/DEAH box RNA helicase family protein

3.9e-54

31.93

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Query:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYF-HPCDDAWRPSLIAFPH
        M+KQA+ ++IKKHM+NGG NSFNFH S RMIPH  +PEVQ V+ SIKQFV  GKK+++++A +  +F+ KLT  ET +L KY+ +P ++  R SLIAFPH
Subjt:  MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQI-SFKNKLTDTETQLLLKYF-HPCDDAWRPSLIAFPH

Query:  FQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSV------------------------AQSINEVNASKAELEVPLVYPEVSLPQNSAENNCI
        FQT PS+ H V+HS +T +LID MQHLQ   FS +S+SF                            S+ ++  + ++ +   V    S  + + ++   
Subjt:  FQTFPSRTHGVLHSCRTMVLIDTMQHLQGLHFSRESESFSV------------------------AQSINEVNASKAELEVPLVYPEVSLPQNSAENNCI

Query:  SGCCSPKH--------STIDLIG-----------------SGSKLLSFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKI-LPDEFFPSPETDCVPVLEDK
        S   SP H        +++D +G                 S +  L  +E    C  T+   +VP +   K         L + F P           D 
Subjt:  SGCCSPKH--------STIDLIG-----------------SGSKLLSFSEPGSYCVRTAQDLIVPTEAVIKQTTSQTKI-LPDEFFPSPETDCVPVLEDK

Query:  AMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFT-PADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNS
        A   +ET   ++L+KR   N   V E  V     +    +DE      +LSPRLTN I+SG VP+SP+ D G    R  +    Q   P +        S
Subjt:  AMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFT-PADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAKSQFILPAQVDGLQLLNS

Query:  SSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGD---
        S         CN          L + + +       E + +      SP+ ++ +TPLA  T  +S   + W   +GEK  ++ +P K KRLR++GD   
Subjt:  SSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLA--TIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKVGD---

Query:  -MKKN-------ENIESMA--------KTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRV
         +K+N       ++I S +        K   +     + + +     KKKK       DD+V+ FI+EEAEVSS A +S DE++++   S  DSFIDD  
Subjt:  -MKKN-------ENIESMA--------KTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSS--DSFIDDRV

Query:  NASASSTQDGTSKPDMM
          +A +TQ  + K DMM
Subjt:  NASASSTQDGTSKPDMM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAAAAAGCAAGCAACAAGCAAGTCTATAAAGAAGCACATGCAAAATGGGGGAGTAAATAGTTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATGCTATCAGACC
AGAAGTCCAGTTTGTTAAGCTGTCTATCAAACAATTTGTTCGTCCTGGAAAAAAAGTGAAAGATGATCATGCTGTTCAGATATCATTTAAGAACAAGTTAACTGATACTG
AGACTCAGTTACTTCTCAAGTATTTCCATCCTTGTGACGATGCATGGCGGCCGTCCCTTATTGCCTTTCCTCACTTCCAGACTTTTCCCTCAAGAACCCATGGAGTATTG
CATTCATGTAGAACAATGGTTCTGATTGACACAATGCAACACTTGCAAGGACTGCATTTTTCTAGGGAATCTGAATCATTCTCTGTTGCACAGTCAATAAATGAAGTCAA
CGCATCAAAAGCAGAATTAGAAGTGCCATTAGTGTATCCTGAAGTCTCACTACCCCAAAATTCTGCAGAAAACAATTGTATTTCTGGTTGCTGTTCTCCCAAACATTCTA
CAATAGACCTCATTGGTTCAGGTAGCAAATTATTGAGTTTTTCTGAGCCAGGTTCTTACTGTGTAAGAACTGCTCAGGACTTAATTGTGCCAACTGAAGCTGTCATCAAG
CAGACAACTTCACAAACAAAAATCTTACCTGATGAGTTTTTTCCAAGCCCTGAAACAGATTGTGTTCCTGTCTTGGAGGACAAAGCAATGAATCTGATTGAGACAAATCA
TCAAAACACTCTCTTGAAGAGGATTTTTTTTAATAAAGATACTGTCGATGAAAAACTTGTTCTGGAAATCGAGCCGCAATTCACCCCGGCTGACGAATTCAGTATTACTG
AGACTCAGCTTAGTCCTCGTCTCACTAATTTAATCGAGAGTGGTTTTGTACCAGATTCACCAATTAATGATTGTGGATATTCTAGACAACGGATATCTGAATCAGCAAAA
TCCCAGTTTATTTTGCCTGCCCAAGTGGATGGTCTACAGCTTTTAAACTCCTCAAGTTCTGGGATAAATGAAATGATTAATTGTAATGCGGGCTTTTGTGCTGGAAATGA
TATTTTTCTCGCAAGCAGTGAAGGTCAATCTTCTGCACTCAAGGATAATGAGAGCGTGGGTATAAAATCACATGCCCCTACATCTCCTATGGCTGATGAAATACAAACTC
CCTTGGCTACTATTGCAAGCAGTTGTGATAATGAAGTTTGGGATTCAGTTAATGGAGAAAAGTTTAGCAGTGTACCGAAACCCCACAAATTCAAAAGATTGCGAAAGGTT
GGAGACATGAAGAAAAATGAAAACATTGAAAGCATGGCAAAAACTTCAATTTCTCCATTGGGAAATATGGTTGGAACTTTTTCTAGCACCAGACAATTTAAAAAAAAGAA
ACGCGATGGTGAAAGGAGATTTGACGACAATGTTAAAGCATTTATCGAGGAGGAAGCTGAGGTGTCTTCGGATGCTACCATATCTGGGGATGAAGATGACAACATTAAGA
GCTCGTCTGATAGTTTCATAGATGATAGGGTCAATGCTAGTGCCTCGAGTACTCAAGATGGAACAAGCAAACCAGATATGATG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIRPEVQFVKLSIKQFVRPGKKVKDDHAVQISFKNKLTDTETQLLLKYFHPCDDAWRPSLIAFPHFQTFPSRTHGVL
HSCRTMVLIDTMQHLQGLHFSRESESFSVAQSINEVNASKAELEVPLVYPEVSLPQNSAENNCISGCCSPKHSTIDLIGSGSKLLSFSEPGSYCVRTAQDLIVPTEAVIK
QTTSQTKILPDEFFPSPETDCVPVLEDKAMNLIETNHQNTLLKRIFFNKDTVDEKLVLEIEPQFTPADEFSITETQLSPRLTNLIESGFVPDSPINDCGYSRQRISESAK
SQFILPAQVDGLQLLNSSSSGINEMINCNAGFCAGNDIFLASSEGQSSALKDNESVGIKSHAPTSPMADEIQTPLATIASSCDNEVWDSVNGEKFSSVPKPHKFKRLRKV
GDMKKNENIESMAKTSISPLGNMVGTFSSTRQFKKKKRDGERRFDDNVKAFIEEEAEVSSDATISGDEDDNIKSSSDSFIDDRVNASASSTQDGTSKPDMM

Cucsat.G5090 (gene) of Cucumber (B10) v3 genome