; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5091 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5091
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionDEAD-box ATP-dependent RNA helicase FANCM
Genome locationctg1227:3500396..3515977
RNA-Seq ExpressionCucsat.G5091
SyntenyCucsat.G5091
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0032508 - DNA duplex unwinding (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0043138 - 3'-5' DNA helicase activity (molecular function)
InterPro domainsIPR001650 - Helicase, C-terminal
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR039686 - FANCM/Mph1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652234.1 hypothetical protein Csa_022145 [Cucumis sativus]1.25e-18299.63Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVLT+HFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

XP_008441148.1 PREDICTED: Fanconi anemia group M protein isoform X6 [Cucumis melo]7.32e-18298.53Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLE+KLQQGSFARFMSKNHH+CEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVL DHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

XP_031736810.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X5 [Cucumis sativus]7.55e-18299.63Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVLT+HFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

XP_031736811.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X6 [Cucumis sativus]3.50e-18299.63Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVLT+HFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

XP_031736812.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X7 [Cucumis sativus]3.61e-18399.63Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVLT+HFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

TrEMBL top hitse value%identityAlignment
A0A1S3B2A7 Fanconi anemia group M protein isoform X44.54e-18298.53Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLE+KLQQGSFARFMSKNHH+CEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVL DHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

A0A1S3B2S2 Fanconi anemia group M protein isoform X63.54e-18298.53Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLE+KLQQGSFARFMSKNHH+CEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVL DHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

A0A1S3B3H7 Fanconi anemia group M protein isoform X21.40e-18098.53Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLE+KLQQGSFARFMSKNHH+CEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVL DHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

A0A1S4DTZ2 Fanconi anemia group M protein isoform X54.54e-18298.53Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLE+KLQQGSFARFMSKNHH+CEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVL DHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

A0A1S4DUR1 Fanconi anemia group M protein isoform X34.88e-18298.53Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLE+KLQQGSFARFMSKNHH+CEVRLIMEKSLTHGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        MEVL DHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGG+NSFNFHASSRMIPHAIR
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

SwissProt top hitse value%identityAlignment
A0A1D5PRR9 Fanconi anemia group M protein3.5e-4837.62Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP-----------ASEMLEEKLQQGSFARFM----------------SK
        L+   ++ +RD++R+ P P +  ++   +EG F + I+LYH  +LL   G+R            +  +   K + G    FM                S 
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP-----------ASEMLEEKLQQGSFARFM----------------SK

Query:  NHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKTKDP------------QDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQ
        N ++ + R + E         PKL K+ E++ +HFK++               D+RV+IFS+FR SV++I   LS+   +VR   F+G S+GKS KG +Q
Subjt:  NHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKTKDP------------QDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQ

Query:  KVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNF
        K Q  V+++FR GG+N +V+TC+GEEGLDI EVDL+ICFDA  SPIR++QRMGRTGR+  GRVVV+  EG E + Y + Q+  +SI+K +    +  F  
Subjt:  KVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNF

Query:  HASSRMIPHAI
        H S RMIP  I
Subjt:  HASSRMIPHAI

I3XHK1 DEAD-box ATP-dependent RNA helicase FANCM3.9e-11675.82Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSP ++L +RDKFRQAP P  PH+ + DVE  F  LITLYHIRKLLSSHGIRPA EMLEEKL++G FAR MSKN  +   +L+M++ L+HGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        +E+L DHFK KDP+ SRVIIFSNFRGSVRDIM+ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGGFNVIVAT IGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DAN+SP+RMIQRMGRTGRK++GRVVVLACEGSE   YM+KQA+ ++IKKHM+NGG NSFNFH S RMIPH  +
Subjt:  DANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

Q2HG76 ATP-dependent DNA helicase MPH11.2e-4036.18Show/hide
Query:  LSPCDLLNSRDKFRQAP-PPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP------------------ASEMLEEKLQQGSFARFMSKNHHVCEVR
        L+   LL SR ++   P    +  +K+  +   F +L +L H+ KLL+ HGI+P                   S++  + L   SF R M+    + E  
Subjt:  LSPCDLLNSRDKFRQAP-PPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP------------------ASEMLEEKLQQGSFARFMSKNHHVCEVR

Query:  LIMEKSLTHGAPSPKLSKMMEVLTDHF-KTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIV
        + ME+   H    PKL+ + E L +HF    +  ++R I+FS +R S  +I+  L+  + ++RAT F+GQ+  K  +G  QK Q   +EKF+ GGFNV+V
Subjt:  LIMEKSLTHGAPSPKLSKMMEVLTDHF-KTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIV

Query:  ATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        AT IGEEGLDI +VDL++C+DA+ SPIRM+QRMGRTGRK  G +V+L  +G E + +++ +   + +++ + NG   +F    S+R++P  IR
Subjt:  ATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

Q8BGE5 Fanconi anemia group M protein homolog5.5e-4637.09Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP----ASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPS--
        L+   ++ +RD+FR+ P P    I+   +EG F + I+LYH  +LL   G+R      S +++           +S+N    ++   ++ +    + S  
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP----ASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPS--

Query:  ----------------PKLSKMMEVLTDHFKT--------KDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEK
                        PKL K+ EV+ +HFK+        K   +SRV+IFS+FR SV +I   L +   ++R   F+G +SGK+ KG +QK Q  V+ +
Subjt:  ----------------PKLSKMMEVLTDHFKT--------KDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEK

Query:  FRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPH
        FR GG+N +V+TC+GEEGLDI EVDL+ICFDA  SPIR+IQRMGRTGRK  GR+VV+  EG E + Y + Q+  K+I K +         +  S RM+P 
Subjt:  FRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPH

Query:  AI
         I
Subjt:  AI

Q8IYD8 Fanconi anemia group M protein1.7e-4737.91Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP-----------ASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLT
        L+   ++ +RD+FR+ P P    I+   +EG F + I+LYH  +LL   G+R               M   K + G    FM   +H+ E      +S +
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRP-----------ASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLT

Query:  HGAPS---------------PKLSKMMEVLTDHFKT--------KDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQA
            S               PKL K+ EV+ +HFK+        K   ++RV+IFS+FR SV++I   LS+ + I+R   F+G +SGKS KG +QK Q  
Subjt:  HGAPS---------------PKLSKMMEVLTDHFKT--------KDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQA

Query:  VLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSR
        V+++FR GG+N +V+TC+GEEGLDI EVDL+ICFD+  SPIR++QRMGRTGRK  GR+V++  EG E + Y + Q+  +SI K + +       +  S R
Subjt:  VLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSR

Query:  MIPHAI
        M+P  I
Subjt:  MIPHAI

Arabidopsis top hitse value%identityAlignment
AT1G01040.1 dicer-like 11.0e-0723.78Show/hide
Query:  RPASEMLEEKLQQGSFA--RFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDI--VRATEF
        +P +    +++++G       +S   HV EV   +  ++  G  +PK+  ++++L    K +   D R I+F     +   +    +++  +  +R    
Subjt:  RPASEMLEEKLQQGSFA--RFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDI--VRATEF

Query:  IGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGS
        IG ++ + +K       Q  + KFR G   ++VAT + EEGLDI + ++V+ FD   + +  IQ  GR  RK     +++   G+
Subjt:  IGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGS

AT1G01040.2 dicer-like 11.0e-0723.78Show/hide
Query:  RPASEMLEEKLQQGSFA--RFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDI--VRATEF
        +P +    +++++G       +S   HV EV   +  ++  G  +PK+  ++++L    K +   D R I+F     +   +    +++  +  +R    
Subjt:  RPASEMLEEKLQQGSFA--RFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDI--VRATEF

Query:  IGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGS
        IG ++ + +K       Q  + KFR G   ++VAT + EEGLDI + ++V+ FD   + +  IQ  GR  RK     +++   G+
Subjt:  IGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKHDGRVVVLACEGS

AT1G35530.1 DEAD/DEAH box RNA helicase family protein1.7e-9576.79Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSP ++L +RDKFRQAP P  PH+ + DVE  F  LITLYHIRKLLSSHGIRPA EMLEEKL++G FAR MSKN  +   +L+M++ L+HGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        +E+L DHFK KDP+ SRVIIFSNFRGSVRDIM+ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGGFNVIVAT IGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGRV
        DAN+SP+RMIQRMGRTGRK++GR+
Subjt:  DANISPIRMIQRMGRTGRKHDGRV

AT1G35530.2 DEAD/DEAH box RNA helicase family protein3.4e-11574.82Show/hide
Query:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM
        LSP ++L +RDKFRQAP P  PH+ + DVE  F  LITLYHIRKLLSSHGIRPA EMLEEKL++G FAR MSKN  +   +L+M++ L+HGAPSPKLSKM
Subjt:  LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKM

Query:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF
        +E+L DHFK KDP+ SRVIIFSNFRGSVRDIM+ALS I D+V+ATEFIGQSSGK+LKGQSQK+QQAVLEKFRAGGFNVIVAT IGEEGLDIMEVDLVICF
Subjt:  MEVLTDHFKTKDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICF

Query:  DANISPIRMIQRMGRTGRKHDGR-VVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR
        DAN+SP+RMIQRMGRTGRK++GR ++VLACEGSE   YM+KQA+ ++IKKHM+NGG NSFNFH S RMIPH  +
Subjt:  DANISPIRMIQRMGRTGRKHDGR-VVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR

AT5G20320.1 dicer-like 43.0e-0733.33Show/hide
Query:  RVIIFSNFRGSVRDIMSALSKIEDIVRATE---FIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRM
        + IIF N   + R +   L+ +E ++R+ +    +G SSG  LK  S++  + +L++F++   N++VAT +GEEGLDI    LVI +D   +    IQ  
Subjt:  RVIIFSNFRGSVRDIMSALSKIEDIVRATE---FIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRM

Query:  GRTGRKHDGRVVVLACEGSE
        GR  R        L   G+E
Subjt:  GRTGRKHDGRVVVLACEGSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAGTCCATGTGATTTACTGAACTCTAGGGATAAATTTCGTCAAGCACCCCCACCAGTCCATCCACACATTAAGTATCATGACGTAGAGGGTTTCTTTGGAGTACTCAT
TACACTATACCATATACGTAAGTTACTTTCAAGCCATGGAATAAGGCCAGCGTCTGAGATGCTAGAAGAGAAGCTACAACAAGGGTCTTTTGCAAGATTTATGAGCAAAA
ATCATCATGTCTGCGAAGTGAGACTCATAATGGAGAAGAGCTTGACCCATGGTGCACCAAGTCCCAAATTGTCCAAAATGATGGAAGTATTGACCGACCATTTTAAAACG
AAGGATCCACAAGATTCAAGGGTGATTATATTCTCAAATTTCAGGGGAAGTGTAAGGGACATTATGAGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTT
TATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAGGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTTCAATGTCATTGTTGCCACATGCA
TTGGTGAAGAAGGTCTTGATATAATGGAAGTCGATCTTGTTATCTGTTTCGATGCAAATATTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACCGGAAGGAAGCAT
GATGGAAGAGTGGTAGTTTTAGCATGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAGCAACAAGCAAGTCTATAAAGAAGCACATGCAAAATGGGGGAGTAAA
TAGTTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATGCTATCAGA
mRNA sequenceShow/hide mRNA sequence
TTGAGTCCATGTGATTTACTGAACTCTAGGGATAAATTTCGTCAAGCACCCCCACCAGTCCATCCACACATTAAGTATCATGACGTAGAGGGTTTCTTTGGAGTACTCAT
TACACTATACCATATACGTAAGTTACTTTCAAGCCATGGAATAAGGCCAGCGTCTGAGATGCTAGAAGAGAAGCTACAACAAGGGTCTTTTGCAAGATTTATGAGCAAAA
ATCATCATGTCTGCGAAGTGAGACTCATAATGGAGAAGAGCTTGACCCATGGTGCACCAAGTCCCAAATTGTCCAAAATGATGGAAGTATTGACCGACCATTTTAAAACG
AAGGATCCACAAGATTCAAGGGTGATTATATTCTCAAATTTCAGGGGAAGTGTAAGGGACATTATGAGTGCACTATCCAAGATTGAAGACATTGTCAGAGCTACTGAGTT
TATTGGTCAAAGCTCAGGAAAATCTCTCAAAGGTCAATCACAAAAGGTTCAACAGGCTGTTTTGGAGAAATTTCGTGCTGGCGGGTTCAATGTCATTGTTGCCACATGCA
TTGGTGAAGAAGGTCTTGATATAATGGAAGTCGATCTTGTTATCTGTTTCGATGCAAATATTTCACCAATAAGAATGATTCAGCGGATGGGTAGAACCGGAAGGAAGCAT
GATGGAAGAGTGGTAGTTTTAGCATGTGAAGGGTCAGAATTGAAGGGTTACATGAAAAAGCAAGCAACAAGCAAGTCTATAAAGAAGCACATGCAAAATGGGGGAGTAAA
TAGTTTCAACTTTCATGCTAGCTCTAGAATGATTCCACATGCTATCAGA
Protein sequenceShow/hide protein sequence
LSPCDLLNSRDKFRQAPPPVHPHIKYHDVEGFFGVLITLYHIRKLLSSHGIRPASEMLEEKLQQGSFARFMSKNHHVCEVRLIMEKSLTHGAPSPKLSKMMEVLTDHFKT
KDPQDSRVIIFSNFRGSVRDIMSALSKIEDIVRATEFIGQSSGKSLKGQSQKVQQAVLEKFRAGGFNVIVATCIGEEGLDIMEVDLVICFDANISPIRMIQRMGRTGRKH
DGRVVVLACEGSELKGYMKKQATSKSIKKHMQNGGVNSFNFHASSRMIPHAIR