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Cucsat.G5146 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5146
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationctg1227:4421281..4432702
RNA-Seq ExpressionCucsat.G5146
SyntenyCucsat.G5146
Gene Ontology termsGO:0006260 - DNA replication (biological process)
GO:0006281 - DNA repair (biological process)
GO:0015074 - DNA integration (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0008622 - epsilon DNA polymerase complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042858.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.40e-2466.23Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        + VYGRP PPL+SY  +KT NN  +  LKER + INALKENL +AQNRMKK AD++ REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
KAA0062449.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]2.38e-2568.83Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPL+ Y   K+ NN  +Q LKER ++I+ALKENL++AQNRMKKQADL  REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
KAA0062471.1 Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]1.67e-2570.13Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPLISY  +KT NN  +  LKER + I+ALKENL IAQNRMKK AD + REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
TYJ98047.1 Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]2.47e-2468.83Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPL+ Y   K+ NN  +Q LKER ++I+ALKENL++AQNRMKKQADL  REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
TYK23013.1 disease resistance protein [Cucumis melo var. makuwa]4.68e-2568.83Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPL+ Y  RK+ NN  +Q LKER ++I+ALKENL+IAQNRMKKQADL  REL F+V ++VYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
TrEMBL top hitse value%identityAlignment
A0A5A7TJ89 Transposon Ty3-G Gag-Pol polyprotein1.16e-2466.23Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        + VYGRP PPL+SY  +KT NN  +  LKER + INALKENL +AQNRMKK AD++ REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
A0A5A7V9X8 Transposon Ty3-G Gag-Pol polyprotein8.09e-2670.13Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPLISY  +KT NN  +  LKER + I+ALKENL IAQNRMKK AD + REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
A0A5D3BFZ9 Transposon Tf2-6 polyprotein1.19e-2468.83Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPL+ Y   K+ NN  +Q LKER ++I+ALKENL++AQNRMKKQADL  REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
A0A5D3DHG8 Disease resistance protein2.27e-2568.83Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPL+ Y  RK+ NN  +Q LKER ++I+ALKENL+IAQNRMKKQADL  REL F+V ++VYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
A0A5D3DUN8 Transposon Ty3-G Gag-Pol polyprotein1.15e-2568.83Show/hide
Query:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
        QVVYGRP PPL+ Y   K+ NN  +Q LKER ++I+ALKENL++AQNRMKKQADL  REL F+VG+EVYLKLRPY+Q
Subjt:  QVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEVYLKLRPYQQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGAAGCCCAATTGATGAGTTATAGGGATTTAGCAATTAAGTTGGCCCTAAGTGAATGGGGTGGTCGTGGGCCGGAGGCATCTAAGGTCCAAACCCAGAATGTGAA
AAATGGGACGATAAATCAAGTAGTGTATGGTAGGCCCTCACCTCCCCTTATTTCATACTGTGCAAGGAAGACAACCAATAACTGTGCTGATCAACAATTGAAAGAGAGGT
ATATGATAATTAATGCCTTGAAGGAGAACCTAGTAATTGCCCAGAATCGGATGAAAAAACAAGCTGACCTACGCTGGAGAGAGTTGAACTTCCAAGTGGGAGAGGAGGTG
TATCTGAAGTTGAGACCATACCAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAGAAGCCCAATTGATGAGTTATAGGGATTTAGCAATTAAGTTGGCCCTAAGTGAATGGGGTGGTCGTGGGCCGGAGGCATCTAAGGTCCAAACCCAGAATGTGAA
AAATGGGACGATAAATCAAGTAGTGTATGGTAGGCCCTCACCTCCCCTTATTTCATACTGTGCAAGGAAGACAACCAATAACTGTGCTGATCAACAATTGAAAGAGAGGT
ATATGATAATTAATGCCTTGAAGGAGAACCTAGTAATTGCCCAGAATCGGATGAAAAAACAAGCTGACCTACGCTGGAGAGAGTTGAACTTCCAAGTGGGAGAGGAGGTG
TATCTGAAGTTGAGACCATACCAGCAATGA
Protein sequenceShow/hide protein sequence
MREAQLMSYRDLAIKLALSEWGGRGPEASKVQTQNVKNGTINQVVYGRPSPPLISYCARKTTNNCADQQLKERYMIINALKENLVIAQNRMKKQADLRWRELNFQVGEEV
YLKLRPYQQ