CuGenDBv2

Gene ID	Cucsat.G52
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	protein LOW PSII ACCUMULATION 3, chloroplastic
Genome location	ctg1:790107..795638
RNA-Seq Expression	Cucsat.G52
Synteny	Cucsat.G52
Gene Ontology terms	NA
InterPro domains	IPR018962 - Domain of unknown function DUF1995 IPR044687 - Protein LOW PSII ACCUMULATION 3

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAE8650015.1 hypothetical protein Csa_009730 [Cucumis sativus]

1.50e-264

99.73

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Query:  SIPLRPLVWRKEYQSSILSLSLSLSLSLSLFSFCFQFSLRSSAKMHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRV
        SIPLRPLVWRKEYQSSILSLSLSLSLSLSL SFCFQFSLRSSAKMHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRV
Subjt:  SIPLRPLVWRKEYQSSILSLSLSLSLSLSLFSFCFQFSLRSSAKMHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRV

Query:  LPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEAN
        LPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEAN
Subjt:  LPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEAN

Query:  EVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPK
        EVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPK
Subjt:  EVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPK

Query:  LAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        LAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
Subjt:  LAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

XP_008448608.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1 [Cucumis melo]

1.02e-223

92.88

Show/hide

Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE

Query:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSY
        KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSY
Subjt:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSY

Query:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        PGPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Subjt:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

XP_008448609.1 PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Cucumis melo]

3.01e-227

96.01

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Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NK  CVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

XP_031738157.1 protein LOW PSII ACCUMULATION 3, chloroplastic [Cucumis sativus]

1.50e-234

97.02

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Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV          FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEK

Query:  VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYP
        VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYP
Subjt:  VKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYP

Query:  GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
Subjt:  GPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

XP_038877167.1 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2 [Benincasa hispida]

8.12e-218

93.25

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Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHF NANFASSS I TA+LPLPSP LACFRISHR+THRS + SS+FEF  RR+LRV   N SNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGG EMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQE+MPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L151 DUF1995 domain-containing protein

3.14e-238

100

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Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

A0A1S3BK29 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X1

4.95e-224

92.88

Show/hide

Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV           FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRV-----------FFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVE

Query:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSY
        KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSY
Subjt:  KVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSY

Query:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS
        PGPWKVLRKVRNK  CVHQQEEMPSLKEVALNILPSS
Subjt:  PGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

A0A1S3BKQ4 protein LOW PSII ACCUMULATION 3, chloroplastic isoform X2

1.46e-227

96.01

Show/hide

Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        MHF NANFASSSTI+TAVLPL SP+LACFRISHR+THRS VSSSMFEFMPRR+LRVLPP+LSNRQ+SNASTDLDVPFPRDYSDLLNQAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFP+METVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NK  CVHQQEEMPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

A0A6J1E988 protein LOW PSII ACCUMULATION 3, chloroplastic

5.18e-207

88.96

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Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        M+F NANF SSSTI  AVLPLPS   ACFR+SHR+ HRS +SSS+ EFM  R+LRVL  N SNR+SS+ STD DVPFPRDY DLL+QAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NKFVCVHQQ++MPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

A0A6J1HNL5 protein LOW PSII ACCUMULATION 3, chloroplastic

3.48e-205

88.34

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Query:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK
        M+F NA F SSSTI  AVLPLPS   ACFR+ HR+ HRS +SSS+ EFM  R+LRVL  N SNR+SS+ STD DVPFPRDY DLL+QAKKATEAAL DNK
Subjt:  MHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNK

Query:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
        QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEG SFKLDYLTKPSFFEDFGFVEKVKMADRVKPE
Subjt:  QLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPE

Query:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR
        DELFLVAYPYFNVNEMLVVEELYKEAV NTTRKLIIFNGELDRIRSGYYPPFFYPKLAAL KTLFP+METVYYIHNFKGQKGGVLFR YPGPWKVLRKVR
Subjt:  DELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVR

Query:  NKFVCVHQQEEMPSLKEVALNILPSS
        NK VCVHQQ++MPSLKEVALNILPSS
Subjt:  NKFVCVHQQEEMPSLKEVALNILPSS

SwissProt top hits

e value

%identity

Alignment

Q8H0W0 Protein LPA3

3.1e-07

Show/hide

Query:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALIDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK
        SSN+     VP   P+ Y  L   A  +   AL D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+     +     TR  + FP+  E +
Subjt:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALIDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK

Query:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR
         A         + +G+S   LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+  +    +T    ++FN ELD 
Subjt:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR

Query:  IRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL
        +R+      F PK   L      +   V+YI   +  K            G LFR YPGPW+V L++    F CV +     +L E    +L
Subjt:  IRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL

Arabidopsis top hits

e value

%identity

Alignment

AT1G73060.1 Low PSII Accumulation 3

2.2e-08

Show/hide

Query:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALIDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK
        SSN+     VP   P+ Y  L   A  +   AL D+K  +EI+FP   + + S  G  +  I+  +  ++ ++R+     +     TR  + FP+  E +
Subjt:  SSNASTDLDVPF--PRDYSDLLNQAKKATEAALIDNKQLMEIEFP--TAGLESVPGDGEGGIE--MTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVK

Query:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR
         A         + +G+S   LD +   S   FF       DF F ++ +     +P++   L  +   +  E+  +E+  +    +T    ++FN ELD 
Subjt:  FARN------TAFEGVSF-KLDYLTKPS---FFE------DFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDR

Query:  IRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL
        +R+      F PK   L      +   V+YI   +  K            G LFR YPGPW+V L++    F CV +     +L E    +L
Subjt:  IRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQK-----------GGVLFRSYPGPWKV-LRKVRNKFVCVHQQEEMPSLKEVALNIL

AT5G48790.1 Domain of unknown function (DUF1995)

6.8e-119

69.4

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Query:  SSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEF-MPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPT
        S +IAT V P     LA    S+ +    S+ S   +     R+L+    ++S   ++N S D +VPFPRDY +L+NQAK+A E AL D KQLMEIEFPT
Subjt:  SSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEF-MPRRHLRVLPPNLSNRQSSNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPT

Query:  AGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYP
        +GL SVPGDGEG  EMTES+ +IR+FCD  + P KA  TR+FFPEANEVKFA+ T F G  FKLDYLTKPS FEDFGF E+VKMADRVKPEDELFLVAYP
Subjt:  AGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYLTKPSFFEDFGFVEKVKMADRVKPEDELFLVAYP

Query:  YFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKFVCVHQQ
        YFNVNEMLVVEELYKEAV NT RKLIIFNGELDRIRSGYYP FFYPKLAAL KTL P+METVYYIHNFKGQKGGVLFR YPGPW+VLR+ RNK++CVHQQ
Subjt:  YFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLFRSYPGPWKVLRKVRNKFVCVHQQ

Query:  EEMPSLKEVALNILPSS
        E MPSLKEVAL+IL S+
Subjt:  EEMPSLKEVALNILPSS

Sequences

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CDS sequence

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TCCATTCCATTGAGACCTCTCGTTTGGAGGAAAGAATATCAATCATCAATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGCTTTCAATT
TTCACTTCGAAGTTCAGCAAAAATGCATTTCTGCAACGCCAATTTTGCTTCTTCCTCTACCATTGCCACTGCGGTTCTTCCACTTCCTTCTCCAAAGCTTGCTTGTTTCA
GGATTTCGCACCGGAGAACTCATCGGAGTTCCGTTTCCAGTTCAATGTTTGAGTTTATGCCGCGTAGACATCTTAGAGTTTTGCCGCCGAATTTGAGTAATCGTCAGAGT
AGCAATGCATCGACTGATTTAGACGTTCCGTTTCCTCGCGATTATTCTGATCTTCTCAATCAGGCGAAAAAAGCAACTGAAGCCGCTTTAATAGACAACAAACAGTTGAT
GGAGATCGAATTTCCAACTGCTGGTCTTGAATCAGTTCCAGGTGACGGCGAAGGAGGAATTGAAATGACTGAGAGTATGCAATTGATTCGCCAATTTTGTGATTGCTTCA
TAGATCCACTGAAAGCCACTCGCACCAGAGTATTCTTTCCAGAGGCCAACGAAGTTAAATTTGCAAGAAATACAGCATTTGAAGGAGTTTCATTCAAGTTGGACTACCTC
ACAAAACCATCATTTTTTGAGGATTTTGGTTTTGTTGAGAAAGTGAAAATGGCTGACCGTGTGAAACCTGAAGATGAGCTTTTTTTGGTTGCATATCCATATTTCAATGT
CAATGAAATGCTTGTGGTTGAAGAGCTTTACAAGGAAGCTGTCCAAAACACTACACGAAAACTCATAATATTTAACGGAGAGCTCGACCGCATTAGATCCGGCTACTATC
CGCCATTTTTCTATCCAAAGCTGGCGGCTCTCATGAAGACTCTCTTCCCCGAGATGGAAACTGTATATTACATTCATAACTTCAAGGGCCAGAAAGGAGGAGTTCTTTTC
AGGAGCTACCCAGGTCCTTGGAAAGTGCTTAGAAAAGTGAGAAACAAATTCGTGTGCGTACATCAGCAAGAAGAAATGCCTTCTCTCAAGGAAGTTGCTCTAAACATTCT
TCCATCTTCTTAA

mRNA sequence

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Protein sequence

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SIPLRPLVWRKEYQSSILSLSLSLSLSLSLFSFCFQFSLRSSAKMHFCNANFASSSTIATAVLPLPSPKLACFRISHRRTHRSSVSSSMFEFMPRRHLRVLPPNLSNRQS
SNASTDLDVPFPRDYSDLLNQAKKATEAALIDNKQLMEIEFPTAGLESVPGDGEGGIEMTESMQLIRQFCDCFIDPLKATRTRVFFPEANEVKFARNTAFEGVSFKLDYL
TKPSFFEDFGFVEKVKMADRVKPEDELFLVAYPYFNVNEMLVVEELYKEAVQNTTRKLIIFNGELDRIRSGYYPPFFYPKLAALMKTLFPEMETVYYIHNFKGQKGGVLF
RSYPGPWKVLRKVRNKFVCVHQQEEMPSLKEVALNILPSS

Cucsat.G52 (gene) of Cucumber (B10) v3 genome