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Cucsat.G5232 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5232
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionTranslocase subunit seca
Genome locationctg1228:288498..290022
RNA-Seq ExpressionCucsat.G5232
SyntenyCucsat.G5232
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047427.1 uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa]7.55e-10294.7Show/hide
Query:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP
        M++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS 
Subjt:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP

Query:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

KAG7032498.1 hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]2.69e-8481.37Show/hide
Query:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK
        V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLFLKGGC LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EK
Subjt:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK

Query:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        PK+LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

XP_004140334.1 uncharacterized protein LOC101221533 [Cucumis sativus]5.17e-115100Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

XP_008465783.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo]9.28e-10994.94Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFS AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

XP_038906747.1 uncharacterized protein LOC120092671 [Benincasa hispida]2.37e-10491.77Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEM TAA DRRER+VCPKPRRLGL+ND  NDNPFRHRFDSDALDLLF KGGCGLENFNSS+ QLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFSPAASPP SPPPSAGRKGGCVR+NFG NPAVRIEGFDCRLDRERRNRS+PALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

TrEMBL top hitse value%identityAlignment
A0A0A0KRF1 Uncharacterized protein2.50e-115100Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A1S3CR46 uncharacterized protein LOC1035033854.49e-10994.94Show/hide
Query:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK
        MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPK
Subjt:  MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPK

Query:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        LLPLFS AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  LLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A5D3C147 Uncharacterized protein3.66e-10294.7Show/hide
Query:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP
        M++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS 
Subjt:  MQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSP

Query:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        AASPPLSPPPSAGRKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Subjt:  AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1E6Z2 uncharacterized protein LOC1114311747.52e-8480.75Show/hide
Query:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK
        V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LENFNSS+ QLASSPPY CG+PPSRVANPLIQDARFG+EK
Subjt:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK

Query:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        PK+LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

A0A6J1I2X1 uncharacterized protein LOC1114704604.34e-8380.12Show/hide
Query:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK
        V EEM  AA TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DALDLLF KGGC LENF SS+ QLASSPPY CG+PPSRVANPLIQDARFG+EK
Subjt:  VCEEMQTAA-TDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK

Query:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
        PK+LP+FSP  A PP SPPPS  R GG VR NFG  PAVRIEGFDCRLDRERRNRSIPALA
Subjt:  PKLLPLFSP-AASPPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13390.1 unknown protein1.0e-2340.94Show/hide
Query:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNAQLASSPP-YFCGSPPSRVANPLIQDA
        EEM+   A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ LD +  KGG G         +   +PP +F GSPPSRV+NPL +D+
Subjt:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNAQLASSPP-YFCGSPPSRVANPLIQDA

Query:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
         F +E   LL + SP+ S P +    PPS+ R G CV    +FG NP VR+ GFDC  DR   NRSI  LA
Subjt:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

AT1G13390.2 unknown protein1.0e-2340.94Show/hide
Query:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNAQLASSPP-YFCGSPPSRVANPLIQDA
        EEM+   A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ LD +  KGG G         +   +PP +F GSPPSRV+NPL +D+
Subjt:  EEMQ--TAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDALDLLFLKGGCGLENFNSSNAQLASSPP-YFCGSPPSRVANPLIQDA

Query:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
         F +E   LL + SP+ S P +    PPS+ R G CV    +FG NP VR+ GFDC  DR   NRSI  LA
Subjt:  RFGDEKPKLLPLFSPAASPPLS---PPPSAGRKGGCV--RVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

AT1G68490.1 unknown protein4.3e-3050Show/hide
Query:  IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDALDLLFLKGGCGLENFNSSNAQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF
        +VCPKPRR+GL N+  + +      F H+        ++D LD++  K G G E  N    Q+  SP P+ CGSPPSRVANPL QDARF DE   +  + 
Subjt:  IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDALDLLFLKGGCGLENFNSSNAQLASSP-PYFCGSPPSRVANPLIQDARFGDEKPKLLPLF

Query:  SP--AASPPLSPPPSAGRKGGC-VRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA
         P     P  SP  S+GRKGGC VR NFG +P VR+EGFDC LDR+ RN SIPALA
Subjt:  SP--AASPPLSPPPSAGRKGGC-VRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA

AT3G02555.1 unknown protein2.4e-2551.37Show/hide
Query:  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDALDLLFLKGGCG-LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLS
        + +VCPKPRR   +       PFR  F  S A D+   K G   L+ F    +  + SPP+F GSPPSR ANPL QDARFGDEK   L   SP+ SP L 
Subjt:  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDALDLLFLKGGCG-LENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLS

Query:  PPPSAGR-KGGCVRVNFGKNPA-VRIEGFDCRLDRERRNRSIPALA
          PSA R K GC R+ FG  PA VR+EGFDC L+R+R N SIPA+A
Subjt:  PPPSAGR-KGGCVRVNFGKNPA-VRIEGFDCRLDRERRNRSIPALA

AT5G16110.1 unknown protein5.3e-2847.83Show/hide
Query:  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL-------ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------
        DR++ +VCPKPRR+GL+ +     P R      A DL   K G  L       E+  +    L+SSPPYF GSPPSR ANPL QDARF DEK        
Subjt:  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGL-------ENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEK--------

Query:  PKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKN-PAVRIEGFDCRLDRERRNRSIPALA
        P L P +S    P  S   S+    GCVR+ FG N PAVR+EGFDC L+R+R+N SIPA+A
Subjt:  PKLLPLFSPAASPPLSPPPSAGRKGGCVRVNFGKN-PAVRIEGFDCRLDRERRNRSIPALA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAA
CCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATGCACAATTAGCCTCGTCGCCAC
CGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCTCTTTTCGCCGGCGGCTTCT
CCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATCGAAGGGTTTGATTGCCGCCTCGACAG
AGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAATTGGGTTTGTGAAGAGATGCAAACCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCAAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAA
CCCATTTAGACACCGGTTTGATTCAGATGCTCTGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAATTTTAACAGTAGTAATGCACAATTAGCCTCGTCGCCAC
CGTATTTTTGTGGATCGCCGCCGAGTAGAGTAGCTAACCCATTAATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTGCCCCTCTTTTCGCCGGCGGCTTCT
CCTCCTTTGTCTCCACCGCCGTCGGCCGGTCGGAAAGGTGGGTGTGTCCGGGTTAATTTTGGTAAGAACCCGGCGGTGAGGATCGAAGGGTTTGATTGCCGCCTCGACAG
AGAGAGGCGAAACCGTAGCATCCCTGCTCTGGCTTAG
Protein sequenceShow/hide protein sequence
MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLENFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAAS
PPLSPPPSAGRKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA