; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5248 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5248
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionCold shock protein 2-like
Genome locationctg1228:239946..241880
RNA-Seq ExpressionCucsat.G5248
SyntenyCucsat.G5248
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51220.2 hypothetical protein Csa_008318 [Cucumis sativus]1.61e-11699.44Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFG
        +RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFG
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFG

Query:  RGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
Subjt:  RGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_004140332.1 cold shock protein 2 [Cucumis sativus]1.80e-124100Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
Subjt:  RGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_008465791.1 PREDICTED: cold shock protein 2-like [Cucumis melo]2.74e-11795.05Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPSGGG-RGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRW +GPSGGG RGGGECYNCGRMGHLARDCYRGNGGAP GRRY+GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGRWNEGPSGGG-RGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_022993723.1 cold shock protein 2-like [Cucurbita maxima]8.66e-9982.14Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--
        MAE+KRS+GTVRWFSAQKGFGFIAPDDATDDLFVHQTSI+SEGFRTLFDGQ VEF IDYD+DQRAKAVDVTV  RS+ YGGGRGG RGRGG YGRFGG  
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--

Query:  --GGRGFGRGRWN-EGPSGG------GRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
          GGRGFGRG    +GPSGG      GRGGGECYNCGRMGHLARDCYRGNGGAP     GR Y GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  --GGRGFGRGRWN-EGPSGG------GRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

XP_038906549.1 glycine-rich protein 2-like [Benincasa hispida]1.11e-10185.56Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA++DLFVHQTSIRSEGFRTLFDGQ VEFTIDYD+DQR+KAVDVTVI RST YGGGRGGGRGRGG+YGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRG-RWNE-----GPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRG R+ +     G  GGGRGGGECYNCGRMGHLARDCYRGNGGAP GR Y GGRGYGGG GG GCYNCGDTGH ARDCQNESK
Subjt:  RGFGRG-RWNE-----GPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

TrEMBL top hitse value%identityAlignment
A0A0A0KRF7 Uncharacterized protein8.72e-125100Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
Subjt:  RGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

A0A1S3CPN9 cold shock protein 2-like1.33e-11795.05Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPSGGG-RGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRW +GPSGGG RGGGECYNCGRMGHLARDCYRGNGGAP GRRY+GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGRWNEGPSGGG-RGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

A0A5A7TX13 Cold shock protein 2-like1.33e-11795.05Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGG

Query:  RGFGRGRWNEGPSGGG-RGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
        RGFGRGRW +GPSGGG RGGGECYNCGRMGHLARDCYRGNGGAP GRRY+GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGRWNEGPSGGG-RGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

A0A6J1FIQ9 cold shock protein 2-like4.29e-9781.31Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--
        MAE+KRS+GTVRWFSAQKGFGFIAPDDATDDLFVHQTSI+SEGFRTLFDGQ VEF IDYD+DQRAKAVDVTV  RS+ YGGGRGG RGRGG YGRFGG  
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--

Query:  --GGRGFGRGRWN-EGPSGG------GRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGG--RGCYNCGDTGHLARDCQNESK
          GGRGFGRG    +GPSGG      GRGGGECYNCGRMGHLARDCYRGNGGAP     GR Y GGRGYGGGGGG  RGCYNCGDTGH ARDCQNESK
Subjt:  --GGRGFGRGRWN-EGPSGG------GRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGG--RGCYNCGDTGHLARDCQNESK

A0A6J1K351 cold shock protein 2-like4.19e-9982.14Show/hide
Query:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--
        MAE+KRS+GTVRWFSAQKGFGFIAPDDATDDLFVHQTSI+SEGFRTLFDGQ VEF IDYD+DQRAKAVDVTV  RS+ YGGGRGG RGRGG YGRFGG  
Subjt:  MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGG--

Query:  --GGRGFGRGRWN-EGPSGG------GRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK
          GGRGFGRG    +GPSGG      GRGGGECYNCGRMGHLARDCYRGNGGAP     GR Y GGRGYGGGGGGRGCYNCGDTGH ARDCQNESK
Subjt:  --GGRGFGRGRWN-EGPSGG------GRGGGECYNCGRMGHLARDCYRGNGGAP----SGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 16.7e-2444.81Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG
        RSTG V WF+A KG+GFI PDD + +LFVHQ+SI SEG+R+L  G  VEF I    D + KAV+VT         + ++R  G R GG G G  + G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG

Query:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
           +  G G    G     RGG  CYNCG  GH ARDC     G   G            GG  GCY CGD GH+ARDC  +S
Subjt:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

P27484 Glycine-rich protein 21.7e-3550Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVID----RSTRYGGGRGGGR-------------
        +R+ GTV+WFS QKGFGFI PDD  +DLFVHQ+ IRSEGFR+L +G+TVEF ++   D R KAVDVT  D    +  R GGG GGGR             
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVID----RSTRYGGGRGGGR-------------

Query:  --GRGGSYG------------------RFGGGGRGFGRGRWNEGPSGGGRGGGE-CYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNC
          GRGGS G                  R+GGGG G+G G    G  GGG GGG  C+ CG  GH ARDC +  GG   G R+ GG   GGGGGG GCY C
Subjt:  --GRGGSYG------------------RFGGGGRGFGRGRWNEGPSGGGRGGGE-CYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNC

Query:  GDTGHLARDC
        G+ GH AR+C
Subjt:  GDTGHLARDC

Q38896 Cold shock domain-containing protein 41.9e-3451.1Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG
        R  GTV+WF  QKGFGFI P D  DDLFVHQ+SIRSEGFR+L   ++VEF ++ D   R KA++V+  D +   G        GGRGG  G GG  G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG

Query:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC
        GG  G G G    G  GGG G   C+ CG  GH+AR+C +G G   G   G RY  G G GGGGGG  CY+CG++GH ARDC
Subjt:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC

Q41188 Cold shock protein 22.5e-3951.26Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG
        +R  G+V+WF  QKGFGFI PDD  DDLFVHQ+SIRSEGFR+L   + VEF ++ D + R KA+DV+  D +                +GGGRGGGRG G
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG

Query:  GSYGRFGGGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC
        G Y   GGGG G+G      G  GGGRGG +CY CG  GH+ARDC  G GG    G  Y GG GYGGGGGG G            CY+CG++GH ARDC
Subjt:  GSYGRFGGGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC

Q94C69 Cold shock domain-containing protein 34.2e-2645.5Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----
        RS G V WFS  KG+GFI PDD  ++LFVHQ+SI S+GFR+L  G++VE+ I    D + KA++VT      +++      G GG     G  G      
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----

Query:  --GGGGRGFGRGRWNEGPSGGGR---GGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
          G GG+ FG         GGGR   G GECY CG +GH ARDC R +GG  SG         GGGGGGR CY+CG+ GHLA+DC+  S
Subjt:  --GGGGRGFGRGRWNEGPSGGGR---GGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 33.0e-2745.5Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----
        RS G V WFS  KG+GFI PDD  ++LFVHQ+SI S+GFR+L  G++VE+ I    D + KA++VT      +++      G GG     G  G      
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-----IDRSTRYGGGRGGGRGRGGSYGRF----

Query:  --GGGGRGFGRGRWNEGPSGGGR---GGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
          G GG+ FG         GGGR   G GECY CG +GH ARDC R +GG  SG         GGGGGGR CY+CG+ GHLA+DC+  S
Subjt:  --GGGGRGFGRGRWNEGPSGGGR---GGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

AT2G21060.1 glycine-rich protein 2B1.3e-3551.1Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG
        R  GTV+WF  QKGFGFI P D  DDLFVHQ+SIRSEGFR+L   ++VEF ++ D   R KA++V+  D +   G        GGRGG  G GG  G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYG--------GGRGGGRGRGGSYGRFG

Query:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC
        GG  G G G    G  GGG G   C+ CG  GH+AR+C +G G   G   G RY  G G GGGGGG  CY+CG++GH ARDC
Subjt:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNG---GAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDC

AT4G36020.1 cold shock domain protein 14.8e-2544.81Show/hide
Query:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG
        RSTG V WF+A KG+GFI PDD + +LFVHQ+SI SEG+R+L  G  VEF I    D + KAV+VT         + ++R  G R GG G G  + G  G
Subjt:  RSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTV-------IDRSTRYGGGRGGGRGRG-GSYGRFG

Query:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES
           +  G G    G     RGG  CYNCG  GH ARDC     G   G            GG  GCY CGD GH+ARDC  +S
Subjt:  GGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNES

AT4G38680.1 glycine rich protein 21.8e-4051.26Show/hide
Query:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG
        +R  G+V+WF  QKGFGFI PDD  DDLFVHQ+SIRSEGFR+L   + VEF ++ D + R KA+DV+  D +                +GGGRGGGRG G
Subjt:  KRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRST--------------RYGGGRGGGRGRG

Query:  GSYGRFGGGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC
        G Y   GGGG G+G      G  GGGRGG +CY CG  GH+ARDC  G GG    G  Y GG GYGGGGGG G            CY+CG++GH ARDC
Subjt:  GSYGRFGGGGRGFGRGRWNEGPSGGGRGGGECYNCGRMGHLARDCYRGNGG-APSGRRYDGGRGYGGGGGGRG------------CYNCGDTGHLARDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGCTGAAGAGATCGACCGGTACTGTAAGGTGGTTTAGTGCACAGAAGGGGTTTGGCTTCATAGCTCCAGATGATGCTACCGATGATCTTTTCGTCCACCAAAC
CTCCATTCGTTCAGAAGGATTCCGGACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGATCAAGATCAACGCGCCAAGGCCGTCGACGTCACTGTAATTG
ATAGATCTACCAGATATGGAGGAGGCCGCGGGGGTGGGAGAGGTAGAGGTGGTTCTTATGGAAGATTCGGTGGTGGTGGACGTGGTTTTGGCAGAGGAAGATGGAACGAA
GGTCCAAGCGGTGGTGGTCGTGGCGGTGGGGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTACAGGGGTAACGGCGGTGCTCCTTCCGGCCGTAG
ATACGACGGTGGTCGAGGTTATGGTGGAGGTGGAGGCGGCAGAGGTTGTTATAATTGTGGAGATACAGGACATTTGGCTAGGGATTGTCAAAACGAAAGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAGCTGAAGAGATCGACCGGTACTGTAAGGTGGTTTAGTGCACAGAAGGGGTTTGGCTTCATAGCTCCAGATGATGCTACCGATGATCTTTTCGTCCACCAAAC
CTCCATTCGTTCAGAAGGATTCCGGACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGATCAAGATCAACGCGCCAAGGCCGTCGACGTCACTGTAATTG
ATAGATCTACCAGATATGGAGGAGGCCGCGGGGGTGGGAGAGGTAGAGGTGGTTCTTATGGAAGATTCGGTGGTGGTGGACGTGGTTTTGGCAGAGGAAGATGGAACGAA
GGTCCAAGCGGTGGTGGTCGTGGCGGTGGGGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTACAGGGGTAACGGCGGTGCTCCTTCCGGCCGTAG
ATACGACGGTGGTCGAGGTTATGGTGGAGGTGGAGGCGGCAGAGGTTGTTATAATTGTGGAGATACAGGACATTTGGCTAGGGATTGTCAAAACGAAAGCAAATGA
Protein sequenceShow/hide protein sequence
MAELKRSTGTVRWFSAQKGFGFIAPDDATDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDQDQRAKAVDVTVIDRSTRYGGGRGGGRGRGGSYGRFGGGGRGFGRGRWNE
GPSGGGRGGGECYNCGRMGHLARDCYRGNGGAPSGRRYDGGRGYGGGGGGRGCYNCGDTGHLARDCQNESK