CuGenDBv2

Gene ID	Cucsat.G5287
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Golgin subfamily A member 6-like protein 4, putative
Genome location	ctg1251:197103..199051
RNA-Seq Expression	Cucsat.G5287
Synteny	Cucsat.G5287
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004148363.1 uncharacterized protein LOC101210706 [Cucumis sativus]

4.11e-91

100

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

XP_008465889.1 PREDICTED: uncharacterized protein LOC103503473 [Cucumis melo]

1.20e-76

87.5

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER+M+DMVKVMQQQAL ++AEAGKVT+  LQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

XP_022131261.1 uncharacterized protein LOC111004517 [Momordica charantia]

1.60e-75

84.21

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKVT+  LQT+KNQ  QNLASD TPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

XP_022996261.1 uncharacterized protein LOC111491540 [Cucurbita maxima]

4.31e-64

80.85

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDK+L+ GRRALFYV+VLSGYEERRIRS R +L+KRLK+AEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKE ETLM++QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQ
        GEER M++MVKVMQQQALLEK EA KV S  LQT+KNQQ Q
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQ

XP_038886906.1 uncharacterized protein LOC120077104 [Benincasa hispida]

3.59e-78

88.82

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKVTS  LQT+KNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKE0 Uncharacterized protein

1.99e-91

100

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

A0A1S3CPZ1 uncharacterized protein LOC103503473

5.80e-77

87.5

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLLQFGRRALFY+RVLSGYEERRIRS R  LDKRLKQAEERK+AIRK+PEQ ILGEVRRMVEEMQ LNK LEETE+AIEEYFKPIDKEAE LMKIQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER+M+DMVKVMQQQAL ++AEAGKVT+  LQTEKNQQTQNLASDTTPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

A0A6J1BQI2 uncharacterized protein LOC111004517

7.73e-76

84.21

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDKLL+FGRRALFYVRVLSGYEERRIRS R +L+KRLKQAEE+K+A+RK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKEAE LMK+QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT
        GEER M+DMVKVMQQQAL EKAEAGKVT+  LQT+KNQ  QNLASD TPQKT
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

A0A6J1H1D7 uncharacterized protein LOC111459545

5.97e-64

80.14

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDK+L+FGRRALFYV+VLSGYEERRIRSLR +L+KRLK+AEERK+AIR++PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKE E LM++QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQ
        GEER M++MVKV+QQQALLEK EA KV S  LQT+KNQQ Q
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQ

A0A6J1K1F5 uncharacterized protein LOC111491540

2.09e-64

80.85

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        MDK+L+ GRRALFYV+VLSGYEERRIRS R +L+KRLK+AEERK+AIRK+PEQ ILGEVRRMVEEMQ LNKKLEETE+AIEEYFKPIDKE ETLM++QLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQ
        GEER M++MVKVMQQQALLEK EA KV S  LQT+KNQQ Q
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVTSRNLQTEKNQQTQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G17010.1 unknown protein

2.3e-36

53.75

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Query:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE
        M+KLL++GR+A+FYVRVLSGYEERRIRS R  L+KR++QA +RK  I +LPEQ +L EVRRMVEEMQNLNK++E TE  IE+YFKPIDK A T+M+IQLE
Subjt:  MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLE

Query:  GEERNMRDMVKVMQQQALLEKAEAGKVT----SRNLQTEKN-----QQTQNLASDTTPQK
        GE++ M  M+   QQ+A+ +  EA K+     + N+ T+ N     Q +++ A++ +  K
Subjt:  GEERNMRDMVKVMQQQALLEKAEAGKVT----SRNLQTEKN-----QQTQNLASDTTPQK

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGACAAGCTTTTGCAGTTTGGACGAAGAGCCCTCTTCTACGTTAGGGTCCTCTCTGGCTATGAAGAGCGGCGGATTCGATCGCTAAGGTTTGACCTTGATAAGCGTCT
CAAACAGGCGGAGGAAAGAAAATCTGCCATAAGAAAGTTGCCAGAACAGACTATCTTAGGTGAAGTTCGTCGTATGGTTGAGGAGATGCAAAATCTAAATAAAAAGTTAG
AGGAAACAGAAACTGCCATTGAAGAATACTTCAAGCCAATTGACAAAGAAGCAGAGACATTGATGAAAATACAACTTGAAGGAGAAGAGAGAAATATGAGGGACATGGTT
AAAGTTATGCAGCAACAGGCTTTACTTGAAAAAGCTGAGGCAGGTAAGGTTACAAGTCGTAATCTTCAAACTGAAAAAAATCAACAAACTCAAAACCTTGCATCTGACAC
AACCCCTCAAAAAACTTAG

mRNA sequence

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Protein sequence

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MDKLLQFGRRALFYVRVLSGYEERRIRSLRFDLDKRLKQAEERKSAIRKLPEQTILGEVRRMVEEMQNLNKKLEETETAIEEYFKPIDKEAETLMKIQLEGEERNMRDMV
KVMQQQALLEKAEAGKVTSRNLQTEKNQQTQNLASDTTPQKT

Cucsat.G5287 (gene) of Cucumber (B10) v3 genome