| GenBank top hits | e value | %identity | Alignment |
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| RVW24009.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.23e-92 | 77.13 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
M QEQYIEKVL F M +AK VSSPL SHFKL ++ SPSTDKEKEDM +VPYASAVGSLMYAMVC RPDIA+ VGVVSRF+SNPG+ HWEA K IMRYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT LKLTFG GKP+L GYTDSDMA D+ +++STSGYLM F+GGAVSWQSRLQKCV+LSTT+A+YIAAA+ACK++LWMK F+QELGFK
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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| RVW24680.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | 1.42e-88 | 77.13 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
M QEQYIEKVL F M++AK VSSPL SHFKL ++ SPSTDKEKEDM +VPYASAVGSLMYAMVC RPDIA+ VGVVSRF+SNPG+ HWEA K IMRYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT LKLTFG GKP+L GYTDSDMA D+ +++STSGYLM F+GGAVSWQSRLQKCV+LSTT+A+YIAAA+ACK++LWMK F+QELGFK
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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| VVA10754.1 PREDICTED: Retrovirus-related Pol poly from [Prunus dulcis] | 2.22e-88 | 70.43 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE YIEKVL+ F M++AKPVS+P PSHFKL +KQSP+ +KEKE+M+ VPY+SAVGSLMYAM+C RPDI H VGVVSRF+S PG++HW A K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT + L FG GKP L GYTD+DMA DL S+KSTSGYL+ F+ GAVSWQS+LQKCV+LSTT+A++IAA +ACK+MLWMKRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| VVA40655.1 PREDICTED: Retrovirus-related [Prunus dulcis] | 1.38e-88 | 70.97 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE YIEKVL+ F M++AKPVS+P PSHFKL +KQSP+ +KEKE+M+ VPY+SAVGSLMYAM+C RPDI H VGVVSRF+S PG++HW A K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT + L FG GKP L GYTD+DMA DL S+KSTSGYL+ F+GGAVSWQS+LQKCV+LSTT+A++IAA +ACK+MLWMKRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| VVA40656.1 PREDICTED: Retrovirus-related [Prunus dulcis] | 4.63e-89 | 70.97 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE YIEKVL+ F M++AKPVS+P PSHFKL +KQSP+ +KEKE+M+ VPY+SAVGSLMYAM+C RPDI H VGVVSRF+S PG++HW A K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT + L FG GKP L GYTD+DMA DL S+KSTSGYL+ F+GGAVSWQS+LQKCV+LSTT+A++IAA +ACK+MLWMKRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| TrEMBL top hits | e value | %identity | Alignment |
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| A0A438CLF9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 5.94e-93 | 77.13 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
M QEQYIEKVL F M +AK VSSPL SHFKL ++ SPSTDKEKEDM +VPYASAVGSLMYAMVC RPDIA+ VGVVSRF+SNPG+ HWEA K IMRYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT LKLTFG GKP+L GYTDSDMA D+ +++STSGYLM F+GGAVSWQSRLQKCV+LSTT+A+YIAAA+ACK++LWMK F+QELGFK
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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| A0A438CN91 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.86e-89 | 77.13 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
M QEQYIEKVL F M++AK VSSPL SHFKL ++ SPSTDKEKEDM +VPYASAVGSLMYAMVC RPDIA+ VGVVSRF+SNPG+ HWEA K IMRYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT LKLTFG GKP+L GYTDSDMA D+ +++STSGYLM F+GGAVSWQSRLQKCV+LSTT+A+YIAAA+ACK++LWMK F+QELGFK
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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| A0A5E4E4T7 PREDICTED: Retrovirus-related Pol poly from | 1.07e-88 | 70.43 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE YIEKVL+ F M++AKPVS+P PSHFKL +KQSP+ +KEKE+M+ VPY+SAVGSLMYAM+C RPDI H VGVVSRF+S PG++HW A K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT + L FG GKP L GYTD+DMA DL S+KSTSGYL+ F+ GAVSWQS+LQKCV+LSTT+A++IAA +ACK+MLWMKRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| A0A5E4GLA2 PREDICTED: Retrovirus-related | 6.70e-89 | 70.97 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE YIEKVL+ F M++AKPVS+P PSHFKL +KQSP+ +KEKE+M+ VPY+SAVGSLMYAM+C RPDI H VGVVSRF+S PG++HW A K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT + L FG GKP L GYTD+DMA DL S+KSTSGYL+ F+GGAVSWQS+LQKCV+LSTT+A++IAA +ACK+MLWMKRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| A0A5E4GLX8 PREDICTED: Retrovirus-related | 2.24e-89 | 70.97 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE YIEKVL+ F M++AKPVS+P PSHFKL +KQSP+ +KEKE+M+ VPY+SAVGSLMYAM+C RPDI H VGVVSRF+S PG++HW A K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT + L FG GKP L GYTD+DMA DL S+KSTSGYL+ F+GGAVSWQS+LQKCV+LSTT+A++IAA +ACK+MLWMKRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.8e-25 | 34.9 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWE-AKCIMRYLR
+SQ Y++K+L F M VS+PLPS IN + ++D++ P S +G LMY M+C RPD+ V ++SR+ S + W+ K ++RYL+
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWE-AKCIMRYLR
Query: GTFSLKLTFGDG---KPVLAGYTDSDMARDLGSKKSTSGYLM-IFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT +KL F + + GY DSD A +KST+GYL +F + W ++ Q V+ S+T+A+Y+A +A ++ LW+K + + K
Subjt: GTFSLKLTFGDG---KPVLAGYTDSDMARDLGSKKSTSGYLM-IFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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| P0CV72 Secreted RxLR effector protein 161 | 1.8e-27 | 47.37 | Show/hide |
Query: MSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLRGTFSLKLTF-GDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGA
M VPY SAVG++MY MV RPD+A VGV+S+F S+P HW+A K ++RYL+ T + L F G L GY+D+D A D+ S++STSGYL GG
Subjt: MSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLRGTFSLKLTF-GDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGA
Query: VSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWM
VSW+S+ Q+ V+LS+T+ +Y+A ++A ++ +W+
Subjt: VSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWM
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 3.3e-66 | 65.59 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQE+YIE+VLE F M AKPVS+PL H KL K P+T +EK +M+KVPY+SAVGSLMYAMVC RPDIAH VGVVSRF+ NPGK+HWEA K I+RYLR
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
GT L FG P+L GYTD+DMA D+ ++KS++GYL F+GGA+SWQS+LQKCV+LSTT+A+YIAA + K+M+W+KRF+QELG
Subjt: GTFSLKLTFGDGKPVLAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELG
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.0e-18 | 34.74 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPL-PSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYL
+SQ +YI +L M AKPV++P+ PS + + TD + Y VGSL Y + RPDI++ V +S+FM P ++H +A K I+RYL
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPL-PSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYL
Query: RGTFSLKLTFGDGKPV-LAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT + + G + L Y+D+D A D ST+GY++ +SW S+ QK V S+T+A+Y + A +M W+ + ELG +
Subjt: RGTFSLKLTFGDGKPV-LAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 7.4e-18 | 32.28 | Show/hide |
Query: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
+SQ +Y +L M AKPV++P+ + KL E Y VGSL Y + RPD+++ V +S++M P HW A K ++RYL
Subjt: MSQEQYIEKVLEHFKMNQAKPVSSPLPSHFKLINKQSPSTDKEKEDMSKVPYASAVGSLMYAMVCIRPDIAHVVGVVSRFMSNPGKQHWEA-KCIMRYLR
Query: GTFSLKLTFGDGKPV-LAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
GT + G + L Y+D+D A D ST+GY++ +SW S+ QK V S+T+A+Y + A ++ W+ + ELG +
Subjt: GTFSLKLTFGDGKPV-LAGYTDSDMARDLGSKKSTSGYLMIFAGGAVSWQSRLQKCVSLSTTKAKYIAAAKACKDMLWMKRFVQELGFK
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