; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5329 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5329
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionexosome complex component RRP43
Genome locationctg1252:222471..240947
RNA-Seq ExpressionCucsat.G5329
SyntenyCucsat.G5329
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0034473 - U1 snRNA 3'-end processing (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0034476 - U5 snRNA 3'-end processing (biological process)
GO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0071035 - nuclear polyadenylation-dependent rRNA catabolic process (biological process)
GO:0071038 - nuclear polyadenylation-dependent tRNA catabolic process (biological process)
GO:0071042 - nuclear polyadenylation-dependent mRNA catabolic process (biological process)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033523.1 Exosome complex component RRP43 [Cucurbita argyrosperma subsp. argyrosperma]2.20e-20295.07Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKE VNKE RKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_004149399.1 exosome complex component RRP43 isoform X1 [Cucumis sativus]6.40e-211100Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_008460772.1 PREDICTED: exosome complex component RRP43 isoform X1 [Cucumis melo]1.85e-20698.03Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKE RKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_008460773.1 PREDICTED: exosome complex component RRP43 isoform X2 [Cucumis melo]1.19e-20698.03Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKE RKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

XP_038877146.1 exosome complex component RRP43 isoform X2 [Benincasa hispida]2.67e-20395.07Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQFYERHL ESIRPDGR LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTP +ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELS+VKGKAAWMAYLD+YCLDADGSLFDAALLSAAAAFSHL+IPVVALNDDGKV+FV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKE RKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

TrEMBL top hitse value%identityAlignment
A0A1S3CD66 exosome complex component RRP43 isoform X18.95e-20798.03Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKE RKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A1S3CEE1 exosome complex component RRP43 isoform X25.74e-20798.03Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDG+VVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKE RKLKLNS+PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A6J1DFM7 exosome complex component RRP434.14e-20093.42Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSS+MEVDAFRRLFP+QFYERH  ESIRPDGR+LGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKEPVNKE RKLKL+SIPFSLTC+LHK +ILADPTAEEES+METIVTVVLD SGQLVSFYKPGGSVLA+TSAVQDC+ALTRQR KELQ+ILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A6J1ESF5 exosome complex component RRP436.15e-20294.74Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PP+CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIP VALNDDGKVVFV EEEGG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKE VNKE RKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

A0A6J1HVL5 exosome complex component RRP437.17e-20194.41Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MGLPNAASGDLSS+MEVDAFRRLFPIQF+ERHL ESIRPDGR+LGKARDTTIALGPVSSANGSALAK+GSTTMLAAIKMEVMTPS+ESPDEGCIA+DFHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        P +CSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFV EE+GG
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG
        ENFEKE VNKE RKLKLNS+PFSLTCLLHK YILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDC+ALTRQRSKELQ+ILDEAISG
Subjt:  ENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISG

Query:  MEID
        MEID
Subjt:  MEID

SwissProt top hitse value%identityAlignment
Q10205 Exosome complex component rrp431.6e-3331.84Show/hide
Query:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV
        F+++ P Q+    L + +R DGRS+ + R+  I    +S+ANGSA+ + G    +  IK E+  P   SP+EG I  +  + P+CS   +PG P++ A V
Subjt:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS
        +S++L  T+  S +I+L+ L + + KAAW+ Y DI CL+ DGS FD A  +  AA   +++P    ++D + V +C             +   R ++L++
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS

Query:  IPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQR
           S +  +    +LADPT EEE +    +T++L+SS  +V   K GG+ +     ++ CI + R +
Subjt:  IPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQR

Q2KHU3 Exosome complex component RRP434.4e-4434.51Show/hide
Query:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV
        F+ + P+++Y R L E+ RPDGR LG+ R TT+ +G + +A+GSAL K+G+TT++  IK E   P  ++PD+G +  +  + P+CS   R G P E A V
Subjt:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS
         S+ ++D I +S +I   +L +  GK AW+ Y D+ CL+ DG++ DA   +  AA  ++Q+P V +N++  +  V       N +K+        L + +
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS

Query:  IPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME
         P + +  +     ++ DPT EEE +    +TVV+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE    M+
Subjt:  IPFSLT-CLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME

Q8TYC2 Exosome complex component Rrp424.6e-3332.55Show/hide
Query:  RPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR
        R DGR   + R   +  G +S ANGSAL ++G+T ++  +K+EV  P  +SP+EG +A++  + P+  P   PG P E A  +S+ +   I  S MIDL 
Subjt:  RPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLR

Query:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADP
        EL + +G+  W+ ++DI+ LD DG+LFDA+++ + +A S  ++P   + DD               E E + ++   L +N  P S+T     +Y+L DP
Subjt:  ELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADP

Query:  TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AVQDCIALTRQRSKELQ
          EEE +M+T +TV +  SG++ +  K  G +  +    ++D I L  ++++E++
Subjt:  TAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTS-AVQDCIALTRQRSKELQ

Q96B26 Exosome complex component RRP431.6e-4635.34Show/hide
Query:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV
        F+ + P+++Y R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   PS ++PD+G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS
         S+ ++D I +S +I   +L +  GK  W+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V       N +K    K    ++ + 
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS

Query:  IPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME
        +  S   +     ++ DPT EEE +    +T+V+D  G+L   +KPGGS L   + +QDC++    R KE++ ++DE I  M+
Subjt:  IPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME

Q9D753 Exosome complex component RRP439.5e-4736.52Show/hide
Query:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV
        F+ + P+++Y R L E+ RPDGR LG+ R TT+ +G +S+A+GSAL K+G+TT++  +K E   P V++PD G +  +  +PP+CS   R G P E A V
Subjt:  FRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRPGRPAEAAPV

Query:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS
         S+ ++D + +S +I   +L +  GK AW+ Y D+ CLD DG++ DA   +  AA  ++Q+P V +N++  +  V       N +K    K    ++ N 
Subjt:  ISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNS

Query:  IPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGM
        +  S   +     ++ DPT EEE +    +TVV D  G+L   +KPGGS L   + +QDC++    R KE+  +LDE I  M
Subjt:  IPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGM

Arabidopsis top hitse value%identityAlignment
AT1G60080.1 3'-5'-exoribonuclease family protein6.4e-12372.64Show/hide
Query:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM
        MG+P+AA  DLS++MEVDAFRR+FP++F+ERHL+ES+RPDGR LGKARDT + LG VS+A+GSALAKIGSTTMLAAI+MEVMTPS +SPDEGCIA++FHM
Subjt:  MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHM

Query:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG
        PP+CSP VRPGRPAEAAPVISK+LSDTI SSGMIDL+EL LV GKAAWM YLDIYCLDADG+LFDAALL+A AAFS+LQIP+VALND+G++V V  E+  
Subjt:  PPVCSPIVRPGRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGG

Query:  EN---FEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEA
        +N    EKE VNKE RKL L +IPFSLTC+LHK YILADPT EEES+M+T+VTVVLDSS Q+VSFYK GG+ LAY+SA++ C+ L R+R+KEL+ IL E 
Subjt:  EN---FEKEPVNKENRKLKLNSIPFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEA

Query:  ISGMEID
           M+ID
Subjt:  ISGMEID

AT3G07750.1 3'-5'-exoribonuclease family protein1.4e-2129.29Show/hide
Query:  FYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIV--RPGR--PAEAAPVISKQ
        F +  + + +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +A+     P   P    R G    +E A  + + 
Subjt:  FYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV    E    E  E +  ++E  +   +S+P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPF

Query:  SLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME
         +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D I++ +  ++ L   LD  IS  E
Subjt:  SLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME

AT3G07750.2 3'-5'-exoribonuclease family protein1.4e-2129.29Show/hide
Query:  FYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIV--RPGR--PAEAAPVISKQ
        F +  + + +R DGR     R   +  G +  ANGSA  +IG T ++A++K E+  PS   PD+G +A+     P   P    R G    +E A  + + 
Subjt:  FYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIV--RPGR--PAEAAPVISKQ

Query:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPF
        L    S +G  I+L  L + +GK  W  Y+D   + +DG+L DA   +  AA ++  IP        KV    E    E  E +  ++E  +   +S+P 
Subjt:  LSDTISSSGM-IDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSIPF

Query:  SLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME
         +T      + + D TAEEES M + V++ ++ +G +    K  GS L   S + D I++ +  ++ L   LD  IS  E
Subjt:  SLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGME


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGCAAATGGAAGTCGATGCTTTTAGACGACTCTTTCCAATTCAGTTTTATGAGCGCCATCTTACTGAATCAAT
ACGTCCTGATGGAAGATCACTGGGAAAAGCTAGAGACACAACCATTGCTCTTGGACCAGTATCTTCTGCAAACGGGTCAGCCCTGGCTAAGATTGGTTCGACGACAATGT
TGGCTGCTATCAAAATGGAAGTAATGACACCTTCTGTTGAGTCACCGGATGAGGGTTGCATAGCTCTTGATTTCCACATGCCTCCAGTATGCTCTCCAATTGTTAGGCCT
GGGAGACCAGCGGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCGAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCTTACTTGGATATTTACTGTTTGGACGCTGATGGTTCTCTTTTTGATGCTGCACTTCTTTCTGCAGCAGCTGCATTTTCTCACTTGCAAATCCCTGTTGTTG
CTCTAAATGATGATGGAAAAGTAGTATTTGTCTGTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAATAAAGAGAACAGGAAACTGAAATTGAACTCTATT
CCTTTCTCATTAACGTGCCTACTCCACAAGAAGTACATCTTGGCCGATCCTACTGCAGAGGAGGAGTCCGTCATGGAAACTATTGTAACTGTGGTTTTGGATTCATCAGG
TCAACTTGTTTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCTTATACATCAGCTGTTCAGGATTGCATTGCATTGACCAGACAAAGATCGAAAGAACTACAGATAATTT
TAGATGAAGCAATTTCTGGTATGGAAATCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGACTGCCAAATGCTGCTTCTGGGGACTTGTCGTCGCAAATGGAAGTCGATGCTTTTAGACGACTCTTTCCAATTCAGTTTTATGAGCGCCATCTTACTGAATCAAT
ACGTCCTGATGGAAGATCACTGGGAAAAGCTAGAGACACAACCATTGCTCTTGGACCAGTATCTTCTGCAAACGGGTCAGCCCTGGCTAAGATTGGTTCGACGACAATGT
TGGCTGCTATCAAAATGGAAGTAATGACACCTTCTGTTGAGTCACCGGATGAGGGTTGCATAGCTCTTGATTTCCACATGCCTCCAGTATGCTCTCCAATTGTTAGGCCT
GGGAGACCAGCGGAAGCAGCACCTGTGATTTCAAAGCAGTTATCTGACACTATTTCGAGTTCTGGGATGATTGATCTGAGAGAACTATCTCTTGTTAAAGGAAAAGCTGC
TTGGATGGCTTACTTGGATATTTACTGTTTGGACGCTGATGGTTCTCTTTTTGATGCTGCACTTCTTTCTGCAGCAGCTGCATTTTCTCACTTGCAAATCCCTGTTGTTG
CTCTAAATGATGATGGAAAAGTAGTATTTGTCTGTGAGGAAGAAGGGGGAGAAAACTTTGAGAAGGAACCTGTCAATAAAGAGAACAGGAAACTGAAATTGAACTCTATT
CCTTTCTCATTAACGTGCCTACTCCACAAGAAGTACATCTTGGCCGATCCTACTGCAGAGGAGGAGTCCGTCATGGAAACTATTGTAACTGTGGTTTTGGATTCATCAGG
TCAACTTGTTTCCTTCTACAAGCCGGGTGGATCCGTTCTTGCTTATACATCAGCTGTTCAGGATTGCATTGCATTGACCAGACAAAGATCGAAAGAACTACAGATAATTT
TAGATGAAGCAATTTCTGGTATGGAAATCGACTAA
Protein sequenceShow/hide protein sequence
MGLPNAASGDLSSQMEVDAFRRLFPIQFYERHLTESIRPDGRSLGKARDTTIALGPVSSANGSALAKIGSTTMLAAIKMEVMTPSVESPDEGCIALDFHMPPVCSPIVRP
GRPAEAAPVISKQLSDTISSSGMIDLRELSLVKGKAAWMAYLDIYCLDADGSLFDAALLSAAAAFSHLQIPVVALNDDGKVVFVCEEEGGENFEKEPVNKENRKLKLNSI
PFSLTCLLHKKYILADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIILDEAISGMEID