; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5339 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5339
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNuclear transcription factor Y subunit
Genome locationctg1252:23045..27098
RNA-Seq ExpressionCucsat.G5339
SyntenyCucsat.G5339
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150466.2 nuclear transcription factor Y subunit A-7 isoform X1 [Cucumis sativus]3.68e-244100Show/hide
Query:  IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQ
        IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQ
Subjt:  IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQ

Query:  PCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHD
        PCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHD
Subjt:  PCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHD

Query:  PSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSL
        PSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSL
Subjt:  PSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSL

Query:  LDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        LDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
Subjt:  LDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

XP_008460780.1 PREDICTED: nuclear transcription factor Y subunit A-7-like [Cucumis melo]3.24e-15084.81Show/hide
Query:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN
        MMSSEIEC N PDCDNQQITNY TNNSQPC+LHG     NSTTA M KEEKRNWAWPK LVDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MN
Subjt:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN

Query:  NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMA-----LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKP
        NEHYHASTSQ ELL+LSMT +TSY YHDPSYGGL SPF FQTMHNSDYSRMA     LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRKP
Subjt:  NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMA-----LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKP

Query:  YLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        YLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDGEGSNISLGSESMCNGS CYQGSQLHLSAYI
Subjt:  YLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

XP_022151660.1 nuclear transcription factor Y subunit A-7-like isoform X1 [Momordica charantia]1.31e-10364.89Show/hide
Query:  VQMMSSEIECRNHPDCDNQQITN----YSTNNSQPCRLHGCVHG--VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLS----GVGPTLPYK
        +QMMSS  E RN P CDN Q  N    Y+T+NSQ    HG  HG    +TT  M KE++ NWAWPK LV S P  KTS K++  T+S    G     P K
Subjt:  VQMMSSEIECRNHPDCDNQQITN----YSTNNSQPCRLHGCVHG--VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLS----GVGPTLPYK

Query:  SRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA
        SRD S +LP MNNEH  ASTS SEL++L MTA TSY YHD   GG+ + PFGFQT+ NS+YS     RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  SRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA

Query:  EVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        EVEN+I+RSQ+KPYLHESRHLHAMRRERGCGGRF+SK KK E+S+ +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Subjt:  EVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

XP_031739714.1 nuclear transcription factor Y subunit A-7 isoform X2 [Cucumis sativus]4.82e-191100Show/hide
Query:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN
        MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN
Subjt:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN

Query:  NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHES
        NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHES
Subjt:  NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHES

Query:  RHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        RHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
Subjt:  RHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

XP_031739715.1 nuclear transcription factor Y subunit A-7 isoform X3 [Cucumis sativus]9.17e-153100Show/hide
Query:  MPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHN
        MPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHN
Subjt:  MPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHN

Query:  SDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSES
        SDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSES
Subjt:  SDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSES

Query:  MCNGSKCYQGSQLHLSAYI
        MCNGSKCYQGSQLHLSAYI
Subjt:  MCNGSKCYQGSQLHLSAYI

TrEMBL top hitse value%identityAlignment
A0A0A0KWA0 Nuclear transcription factor Y subunit1.78e-244100Show/hide
Query:  IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQ
        IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQ
Subjt:  IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQ

Query:  PCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHD
        PCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHD
Subjt:  PCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHD

Query:  PSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSL
        PSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSL
Subjt:  PSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSL

Query:  LDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        LDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
Subjt:  LDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

A0A1S3CEE5 Nuclear transcription factor Y subunit1.57e-15084.81Show/hide
Query:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN
        MMSSEIEC N PDCDNQQITNY TNNSQPC+LHG     NSTTA M KEEKRNWAWPK LVDS+P  +TS KE+ ITLSGV  TLPYKSRD STVLP MN
Subjt:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMN

Query:  NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMA-----LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKP
        NEHYHASTSQ ELL+LSMT +TSY YHDPSYGGL SPF FQTMHNSDYSRMA     LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN+ISRSQRKP
Subjt:  NEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMA-----LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKP

Query:  YLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        YLHESRHLHAMRRERGCGGRFLSK KK EAS SL DDDDGEGSNISLGSESMCNGS CYQGSQLHLSAYI
Subjt:  YLHESRHLHAMRRERGCGGRFLSKNKKAEAS-SLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

A0A6J1DBT5 Nuclear transcription factor Y subunit6.33e-10464.89Show/hide
Query:  VQMMSSEIECRNHPDCDNQQITN----YSTNNSQPCRLHGCVHG--VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLS----GVGPTLPYK
        +QMMSS  E RN P CDN Q  N    Y+T+NSQ    HG  HG    +TT  M KE++ NWAWPK LV S P  KTS K++  T+S    G     P K
Subjt:  VQMMSSEIECRNHPDCDNQQITN----YSTNNSQPCRLHGCVHG--VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLS----GVGPTLPYK

Query:  SRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA
        SRD S +LP MNNEH  ASTS SEL++L MTA TSY YHD   GG+ + PFGFQT+ NS+YS     RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKA
Subjt:  SRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKA

Query:  EVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        EVEN+I+RSQ+KPYLHESRHLHAMRRERGCGGRF+SK KK E+S+ +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Subjt:  EVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

A0A6J1DFC4 Nuclear transcription factor Y subunit4.05e-10365Show/hide
Query:  MMSSEIECRNHPDCDNQQITN----YSTNNSQPCRLHGCVHG--VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLS----GVGPTLPYKSR
        MMSS  E RN P CDN Q  N    Y+T+NSQ    HG  HG    +TT  M KE++ NWAWPK LV S P  KTS K++  T+S    G     P KSR
Subjt:  MMSSEIECRNHPDCDNQQITN----YSTNNSQPCRLHGCVHG--VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLS----GVGPTLPYKSR

Query:  DVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV
        D S +LP MNNEH  ASTS SEL++L MTA TSY YHD   GG+ + PFGFQT+ NS+YS     RMALPLA+AEEPVYVNAKQYHGILRRRQSRAKAEV
Subjt:  DVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGL-LSPFGFQTMHNSDYS-----RMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV

Query:  ENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        EN+I+RSQ+KPYLHESRHLHAMRRERGCGGRF+SK KK E+S+ +DDD+  GSNISLGSE M NGS CY+GS LHLSAYI
Subjt:  ENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

A0A6J1EKQ7 Nuclear transcription factor Y subunit2.21e-8257.68Show/hide
Query:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSG--VGPTLPYK-SRDVSTVLP
        MMSS+ + R HPD        Y   N QP    G       TT  + KE+K NW WP  LVD+ P+   STKE+  T++    G ++  + S+D S VLP
Subjt:  MMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSG--VGPTLPYK-SRDVSTVLP

Query:  FMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYL
         MNNEHYHAST +        T  TSY Y+D  YG L+ PFGFQT+HNS+Y+RM LPLAMAEEPVYVNAKQYHGILRRRQSRAKAEV NKISRSQ+KPYL
Subjt:  FMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYL

Query:  HESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI
        HESRHLHAMRRERGC GRF+SK K  E  + + DD G+GSN+S         S CYQGS+LHLSAYI
Subjt:  HESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAYI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-71.6e-2341.05Show/hide
Query:  TKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLSLSMTANTSYAYHDPSYGGLLSP-------FGFQTMHNSDYSRMALPLAMAEE
        T  +H     +G     + RD     P  +  +Y +   S   S+  + +  A   Y Y DP Y  + +P          Q M       + LP    EE
Subjt:  TKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLSLSMTANTSYAYHDPSYGGLLSP-------FGFQTMHNSDYSRMALPLAMAEE

Query:  PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGS
        PV+VNAKQYHGILRRRQSRA+ E +NK+ +S RKPYLHESRHLHA+RR RGCGGRFL+  K+ E     D    E SN+S G  +M   S
Subjt:  PVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGS

Q93ZH2 Nuclear transcription factor Y subunit A-31.3e-2045.99Show/hide
Query:  FMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLL-------SPFGFQTMHNSDYSRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKIS
        F +N    + T    +      AN S+ Y DP YGGLL       +P     M +    R+ LP  + E +PV+VNAKQYH I+RRRQ RAK E +NK+ 
Subjt:  FMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLL-------SPFGFQTMHNSDYSRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKIS

Query:  RSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS
        R+ RKPYLHESRH+HA++R RG GGRFL+  K  + S
Subjt:  RSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEAS

Q945M9 Nuclear transcription factor Y subunit A-95.6e-2434.98Show/hide
Query:  IVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTST--KELHITLSGVGPTLPYKSRDVSTV
        I  M S      N  D +     + S N+  P          NS+     K  K      +      P ++ +T  KE  +T      T P  + D S  
Subjt:  IVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHGVNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTST--KELHITLSGVGPTLPYKSRDVSTV

Query:  LPFMNNEHYHASTSQ----SELLSLSMTANTSYAYHDPSYGGLLS-----PFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN
            N E  H   +Q     +L+  ++   +S  Y DP Y G++      P GF       +SRM LP  MA+EPV+VNAKQY  ILRRRQ+RAKAE+E 
Subjt:  LPFMNNEHYHASTSQ----SELLSLSMTANTSYAYHDPSYGGLLS-----PFGFQTMHNSDYSRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVEN

Query:  KISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------NKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAY
        K+ +S RKPYLHESRH HAMRR RG GGRF  K       +KAE  S         S+ S   E+     +  QG ++  SAY
Subjt:  KISRSQRKPYLHESRHLHAMRRERGCGGRFLSK------NKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQLHLSAY

Q9LNP6 Nuclear transcription factor Y subunit A-81.5e-2148Show/hide
Query:  SELLSLSMTANTSYAYHDPSYGGLLSPFGF---QTMHNSDYSRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAM
        +++ S    AN S+ Y DP +GGL+ P  +    T+ N   +R+ LP  + E EPV+VNAKQ+H I+RRRQ RAK E +NK+ ++ RKPYLHESRH+HA+
Subjt:  SELLSLSMTANTSYAYHDPSYGGLLSPFGF---QTMHNSDYSRMALPLAMAE-EPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAM

Query:  RRERGCGGRFLSKNKKAEASSLLDD
        +R RG GGRFL+  K  E++    D
Subjt:  RRERGCGGRFLSKNKKAEASSLLDD

Q9LXV5 Nuclear transcription factor Y subunit A-11.9e-2453.44Show/hide
Query:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
        Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K 
Subjt:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN

Query:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK
         + EA      +D  G +   GS +  +GS+
Subjt:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK

Arabidopsis top hitse value%identityAlignment
AT1G30500.1 nuclear factor Y, subunit A72.3e-2541.08Show/hide
Query:  TKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLSLSMTANTSYAYHDPSYGGLLS--PFGFQTMHNSDYSRMALPLAMAEEPVYVN
        T  +H     +G     + RD     P  +  +Y +   S   S+  + +  A   Y Y DP Y  + +  P  +  +       + LP    EEPV+VN
Subjt:  TKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHA---STSQSELLSLSMTANTSYAYHDPSYGGLLS--PFGFQTMHNSDYSRMALPLAMAEEPVYVN

Query:  AKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGS
        AKQYHGILRRRQSRA+ E +NK+ +S RKPYLHESRHLHA+RR RGCGGRFL+  K+ E     D    E SN+S G  +M   S
Subjt:  AKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGS

AT5G12840.1 nuclear factor Y, subunit A11.4e-2553.44Show/hide
Query:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
        Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K 
Subjt:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN

Query:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK
         + EA      +D  G +   GS +  +GS+
Subjt:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK

AT5G12840.2 nuclear factor Y, subunit A11.4e-2553.44Show/hide
Query:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
        Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K 
Subjt:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN

Query:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK
         + EA      +D  G +   GS +  +GS+
Subjt:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK

AT5G12840.3 nuclear factor Y, subunit A11.4e-2553.44Show/hide
Query:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
        Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K 
Subjt:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN

Query:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK
         + EA      +D  G +   GS +  +GS+
Subjt:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK

AT5G12840.4 nuclear factor Y, subunit A11.4e-2553.44Show/hide
Query:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN
        Y DP YGGL+  +G Q +    Y      R ALPL MA+EPVYVNAKQY GILRRR++RAKAE+E K+ R  RKPYLHESRH HAMRR R  GGRF +K 
Subjt:  YHDPSYGGLLSPFGFQTMHNSDY-----SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKN

Query:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK
         + EA      +D  G +   GS +  +GS+
Subjt:  KKAEASSLLDDDDGEGSNISLGSESMCNGSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCTTCTCTCTCTTGTATAAAGAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGA
ATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGAAAATAGTGCAAATGA
TGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGC
GTCAATAGCACCACTGCCTTTATGCCGAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGCCCTTGGTTGACAGTCAACCAGAGCACAAAACAAGCACTAAGGAATTGCA
TATAACTTTGTCCGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAG
AGCTTCTTTCCCTTTCAATGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGCATAATTCAGACTAT
AGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGA
AAATAAAATATCCAGATCACAAAGAAAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGA
AGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTA
CATTTATCTGCATATATATGA
mRNA sequenceShow/hide mRNA sequence
ATCTTCTCTCTCTTGTATAAAGAAATCTCAATCTATGCTTTGTGTTTACCCATTTGCCACCTGTTACCTTTTTCTCCCCAAAGAAAATTTTCTTTCATTGGAAATCTAGA
ATTTTCTCCCATCCCAAACACTCATCATCTCTTCTCTCTCCTCTTAACTCTGAGTTCTCTCCTTCCATATAATTTATTTGAGAGGTTGTATTTGAAAATAGTGCAAATGA
TGAGCTCTGAAATAGAATGCAGAAACCATCCAGATTGTGACAATCAGCAAATCACAAACTACTCCACCAATAATTCTCAACCTTGTAGGTTGCACGGCTGCGTTCACGGC
GTCAATAGCACCACTGCCTTTATGCCGAAAGAAGAAAAAAGAAATTGGGCTTGGCCCAAGCCCTTGGTTGACAGTCAACCAGAGCACAAAACAAGCACTAAGGAATTGCA
TATAACTTTGTCCGGTGTAGGACCAACACTACCATATAAGAGTAGAGATGTATCCACTGTTCTTCCATTCATGAATAATGAACACTACCATGCTTCTACTTCTCAATCAG
AGCTTCTTTCCCTTTCAATGACAGCCAATACGTCCTATGCATACCACGACCCGTCCTATGGAGGACTGCTGTCTCCATTTGGATTTCAAACAATGCATAATTCAGACTAT
AGTAGAATGGCTTTGCCTTTAGCGATGGCAGAAGAACCTGTTTACGTGAATGCCAAGCAGTACCATGGAATTCTACGTCGACGACAATCCCGAGCCAAGGCCGAAGTCGA
AAATAAAATATCCAGATCACAAAGAAAGCCATATCTTCATGAATCGAGACACCTGCACGCCATGAGAAGGGAAAGGGGATGCGGAGGGCGTTTCTTGAGCAAAAACAAGA
AGGCAGAAGCTTCGTCTTTGTTGGATGATGATGATGGGGAAGGCAGCAACATTAGTTTAGGCTCTGAATCAATGTGCAATGGCAGCAAGTGTTATCAAGGATCCCAACTA
CATTTATCTGCATATATATGA
Protein sequenceShow/hide protein sequence
IFSLLYKEISIYALCLPICHLLPFSPQRKFSFIGNLEFSPIPNTHHLFSLLLTLSSLLPYNLFERLYLKIVQMMSSEIECRNHPDCDNQQITNYSTNNSQPCRLHGCVHG
VNSTTAFMPKEEKRNWAWPKPLVDSQPEHKTSTKELHITLSGVGPTLPYKSRDVSTVLPFMNNEHYHASTSQSELLSLSMTANTSYAYHDPSYGGLLSPFGFQTMHNSDY
SRMALPLAMAEEPVYVNAKQYHGILRRRQSRAKAEVENKISRSQRKPYLHESRHLHAMRRERGCGGRFLSKNKKAEASSLLDDDDGEGSNISLGSESMCNGSKCYQGSQL
HLSAYI