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Cucsat.G5393 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5393
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description60S ribosomal protein L29
Genome locationctg1268:267200..268562
RNA-Seq ExpressionCucsat.G5393
SyntenyCucsat.G5393
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458370.1 PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo]1.47e-2991.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

XP_008458371.1 PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo]8.49e-2990Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

XP_010534701.1 PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana]5.98e-2988.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQSHKAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN+KSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

XP_010558440.1 PREDICTED: 60S ribosomal protein L29-1-like [Tarenaya hassleriana]1.21e-2888.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQSHKAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN KSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

XP_011657268.1 60S ribosomal protein L29-1 [Cucumis sativus]1.79e-3093.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

TrEMBL top hitse value%identityAlignment
A0A0A0KCX6 60S ribosomal protein L298.67e-3193.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

A0A1S3C7P2 60S ribosomal protein L294.11e-2990Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

A0A1S3C7U0 60S ribosomal protein L297.11e-3091.67Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

A0A2R6PJK9 60S ribosomal protein L293.37e-2894.55Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

V9HZW1 60S ribosomal protein L292.37e-2888.33Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK
        MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE   G+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGK

SwissProt top hitse value%identityAlignment
P25886 60S ribosomal protein L292.2e-1463.24Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKS-GEMLLGKSKVASAK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K   +M    +K  SA+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKS-GEMLLGKSKVASAK

P47915 60S ribosomal protein L292.2e-1463.24Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKS-GEMLLGKSKVASAK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K   +M    +K  SA+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKS-GEMLLGKSKVASAK

Q58DW3 60S ribosomal protein L292.9e-1463.24Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKS-GEMLLGKSKVASAK
        MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K   +M    +K  SA+
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKS-GEMLLGKSKVASAK

Q84WM0 60S ribosomal protein L29-21.6e-2089.09Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

Q9M7X7 60S ribosomal protein L29-13.5e-2087.27Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family1.1e-2189.09Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

AT3G06680.2 Ribosomal L29e protein family1.1e-2189.09Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

AT3G06680.3 Ribosomal L29e protein family1.1e-2189.09Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

AT3G06700.1 Ribosomal L29e protein family2.5e-2187.27Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE

AT3G06700.2 Ribosomal L29e protein family2.5e-2187.27Show/hide
Query:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE
Subjt:  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAATGCTTCTGGGGAAGAGTAAAGTAGCCTCCGCCAAGTTTAGGGTTTTTATTATTC
AAATCTTTTGTTATTGCTCTTATTTTTGTTCAGTAGTCTTGATATTTGACTCAATTTGGAGACTTTTGCGTCTGAGGCATGTTTTACGAAAATACATTATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCCACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACCAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAATGCTTCTGGGGAAGAGTAAAGTAGCCTCCGCCAAGTTTAGGGTTTTTATTATTC
AAATCTTTTGTTATTGCTCTTATTTTTGTTCAGTAGTCTTGATATTTGACTCAATTTGGAGACTTTTGCGTCTGAGGCATGTTTTACGAAAATACATTATCTGA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGEMLLGKSKVASAKFRVFIIQIFCYCSYFCSVVLIFDSIWRLLRLRHVLRKYII