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Cucsat.G5461 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5461
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionE3 ubiquitin-protein ligase RGLG3-like
Genome locationctg1269:653410..666037
RNA-Seq ExpressionCucsat.G5461
SyntenyCucsat.G5461
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025200.1 E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]1.13e-3791.25Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES +ASKKEAAFALAALMEIPFQYRATLSLPNSKRES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

KAE8647047.1 hypothetical protein Csa_022918 [Cucumis sativus]1.22e-44100Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

TYK07466.1 E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo var. makuwa]1.10e-3791.25Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES +ASKKEAAFALAALMEIPFQYRATLSLPNSKRES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

XP_031739618.1 E3 ubiquitin-protein ligase RGLG3-like [Cucumis sativus]8.83e-4192.86Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSK----RESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES EASKKEAAFALA LMEIPFQYRATLSLPNSK    RESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSK----RESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

XP_031743945.1 E3 ubiquitin-protein ligase RGLG3 isoform X1 [Cucumis sativus]2.47e-4097.5Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVIN+DNAVANQILEN+KAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

TrEMBL top hitse value%identityAlignment
A0A0A0KEM5 Uncharacterized protein1.50e-65100Show/hide
Query:  EQLCERDQAIRKLERKIEDIDRELQSIKLDNEANDLLREQEKEIATYRLYMRCNTEGNPLMLNYIQLQLMGIQIMIFCNRDTMILLDKERIFNRWRLNSE
        EQLCERDQAIRKLERKIEDIDRELQSIKLDNEANDLLREQEKEIATYRLYMRCNTEGNPLMLNYIQLQLMGIQIMIFCNRDTMILLDKERIFNRWRLNSE
Subjt:  EQLCERDQAIRKLERKIEDIDRELQSIKLDNEANDLLREQEKEIATYRLYMRCNTEGNPLMLNYIQLQLMGIQIMIFCNRDTMILLDKERIFNRWRLNSE

Query:  HKLLQD
        HKLLQD
Subjt:  HKLLQD

A0A1S3CHE4 E3 ubiquitin-protein ligase RGLG1 isoform X28.07e-3791.25Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES +ASKKEAAFALAALMEIPFQYRATLSLPNSKRES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

A0A1S3CHF5 E3 ubiquitin-protein ligase RGLG1 isoform X11.17e-3691.25Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES +ASKKEAAFALAALMEIPFQYRATLSLPNSKRES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

A0A5A7SGD8 E3 ubiquitin-protein ligase RGLG1 isoform X15.46e-3891.25Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES +ASKKEAAFALAALMEIPFQYRATLSLPNSKRES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

A0A5D3CAU1 E3 ubiquitin-protein ligase RGLG1 isoform X15.32e-3891.25Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES
        MSES +ASKKEAAFALAALMEIPFQYRATLSLPNSKRES+YGKSAGPLPPPPEVIN+DNAVA Q LE+AKAEKHSSSSES
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSES

SwissProt top hitse value%identityAlignment
Q8RX26 E3 ubiquitin-protein ligase RGLG31.2e-1263.01Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNA---VANQILENAK
        MSE  +A+KKEAAFALAALMEIPFQY+ATLSL N K      +   PLPPPPEVI  DNA   V NQ+ E A+
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNA---VANQILENAK

Q9SAL0 E3 ubiquitin-protein ligase RGLG41.6e-0449.02Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPP
        M+ ++  S KE AFALAALMEIPFQY+A + L    +++   K+  P PPP
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPP

Arabidopsis top hitse value%identityAlignment
AT5G53620.1 unknown protein2.1e-0743.75Show/hide
Query:  EVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLDNEA----NDLLREQEKEIATYR
        E++   +   +Q  E A A    ++   EQL E +++IR+ ERK+E+ DREL +IKLDNEA      +LREQ KE+AT+R
Subjt:  EVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLDNEA----NDLLREQEKEIATYR

AT5G53620.2 unknown protein2.1e-0743.75Show/hide
Query:  EVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLDNEA----NDLLREQEKEIATYR
        E++   +   +Q  E A A    ++   EQL E +++IR+ ERK+E+ DREL +IKLDNEA      +LREQ KE+AT+R
Subjt:  EVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLDNEA----NDLLREQEKEIATYR

AT5G53620.3 unknown protein2.1e-0743.75Show/hide
Query:  EVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLDNEA----NDLLREQEKEIATYR
        E++   +   +Q  E A A    ++   EQL E +++IR+ ERK+E+ DREL +IKLDNEA      +LREQ KE+AT+R
Subjt:  EVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLDNEA----NDLLREQEKEIATYR

AT5G63970.1 Copine (Calcium-dependent phospholipid-binding protein) family8.7e-1463.01Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNA---VANQILENAK
        MSE  +A+KKEAAFALAALMEIPFQY+ATLSL N K      +   PLPPPPEVI  DNA   V NQ+ E A+
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNA---VANQILENAK

AT5G63970.2 Copine (Calcium-dependent phospholipid-binding protein) family8.7e-1463.01Show/hide
Query:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNA---VANQILENAK
        MSE  +A+KKEAAFALAALMEIPFQY+ATLSL N K      +   PLPPPPEVI  DNA   V NQ+ E A+
Subjt:  MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNA---VANQILENAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGAGAGCACAGAAGCGTCAAAGAAGGAAGCAGCATTTGCCTTGGCCGCACTCATGGAAATTCCATTTCAATACAGAGCTACCCTCTCCTTGCCAAATTCTAAGAG
AGAATCTGTATATGGAAAAAGTGCGGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAAC
ATAGTTCCTCATCTGAATCGGAACAACTATGTGAAAGAGACCAGGCTATTCGCAAACTGGAAAGGAAAATAGAAGATATAGATAGGGAATTGCAATCAATTAAATTAGAC
AACGAAGCGAATGATCTTCTGCGGGAACAAGAAAAAGAAATAGCAACTTACCGGTTATATATGAGGTGCAACACGGAAGGGAACCCTTTGATGTTGAATTATATTCAATT
ACAATTAATGGGAATCCAGATAATGATATTTTGCAACCGCGACACAATGATATTGCTAGACAAAGAGAGGATCTTCAACAGATGGAGATTGAACTCAGAGCACAAGTTAT
TGCAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGAGAGCACAGAAGCGTCAAAGAAGGAAGCAGCATTTGCCTTGGCCGCACTCATGGAAATTCCATTTCAATACAGAGCTACCCTCTCCTTGCCAAATTCTAAGAG
AGAATCTGTATATGGAAAAAGTGCGGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTGCAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAAC
ATAGTTCCTCATCTGAATCGGAACAACTATGTGAAAGAGACCAGGCTATTCGCAAACTGGAAAGGAAAATAGAAGATATAGATAGGGAATTGCAATCAATTAAATTAGAC
AACGAAGCGAATGATCTTCTGCGGGAACAAGAAAAAGAAATAGCAACTTACCGGTTATATATGAGGTGCAACACGGAAGGGAACCCTTTGATGTTGAATTATATTCAATT
ACAATTAATGGGAATCCAGATAATGATATTTTGCAACCGCGACACAATGATATTGCTAGACAAAGAGAGGATCTTCAACAGATGGAGATTGAACTCAGAGCACAAGTTAT
TGCAAGATTAG
Protein sequenceShow/hide protein sequence
MSESTEASKKEAAFALAALMEIPFQYRATLSLPNSKRESVYGKSAGPLPPPPEVINYDNAVANQILENAKAEKHSSSSESEQLCERDQAIRKLERKIEDIDRELQSIKLD
NEANDLLREQEKEIATYRLYMRCNTEGNPLMLNYIQLQLMGIQIMIFCNRDTMILLDKERIFNRWRLNSEHKLLQD