; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5467 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5467
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionReverse transcriptase
Genome locationctg1269:848063..850358
RNA-Seq ExpressionCucsat.G5467
SyntenyCucsat.G5467
Gene Ontology termsGO:1902600 - proton transmembrane transport (biological process)
GO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0006508 - proteolysis (biological process)
GO:0006885 - regulation of pH (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0015299 - solute:proton antiporter activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR043502 - DNA/RNA polymerase superfamily
IPR043128 - Reverse transcriptase/Diguanylate cyclase domain
IPR041373 - Reverse transcriptase, RNase H-like domain
IPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037244.1 reverse transcriptase [Cucumis melo var. makuwa]0.087.12Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+ EPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+ EHEEHL  VL+ LR NKLYAKF KCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S +K +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

KAA0048687.1 pol protein [Cucumis melo var. makuwa]0.087.46Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S VK +LL EAH+SPFSMHPGSTKMY+D+K
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

KAA0057672.1 pol protein [Cucumis melo var. makuwa]0.087.63Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSG HQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S VK +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

KAA0062719.1 pol protein [Cucumis melo var. makuwa]0.087.29Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTR+ + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNA A+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVTSW+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVL+Q+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S +K +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

TYK01613.1 pol protein [Cucumis melo var. makuwa]0.087.63Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQ LKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S VK +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

TrEMBL top hitse value%identityAlignment
A0A5A7T190 Reverse transcriptase0.087.12Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+ EPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+ EHEEHL  VL+ LR NKLYAKF KCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S +K +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

A0A5A7U330 Reverse transcriptase0.087.46Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S VK +LL EAH+SPFSMHPGSTKMY+D+K
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

A0A5A7UP94 Pol protein0.087.63Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSG HQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S VK +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

A0A5A7VAL8 Pol protein0.087.29Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTR+ + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNA A+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVTSW+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQNLKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVL+Q+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S +K +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

A0A5D3BPI1 Reverse transcriptase0.087.63Show/hide
Query:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS
        ++ASKLL+QGTW ILASVVDTRE + SL+SEPVVR+YPDVFPE+LP LPPHRE++FAIELEP T PISRAPYRMAPAELKELKVQLQELLDK FIRPSVS
Subjt:  MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVS

Query:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM
        PWGAPVLFVKKKDGSMRLCIDYRELNKVT+KN YPLPRIDDLF+QLQGATVFSKIDLRSGYHQLRI+D D+PKTAFRSRY HYEFIVMSFGLTNAPA+FM
Subjt:  PWGAPVLFVKKKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFM

Query:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL
        DLMN VF++FLDTFVIVFIDDIL+YSKT+AEHEEHL  VL+ LR NKLYAKFSKCEFWLKQV+FLGHVVS  GVSVD AKIEAVT W+RPSTVSEVRSFL
Subjt:  DLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFL

Query:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT
        GLAGYYRRFVE+FSR ATPLT+LTRKG PFVWS ACEDSFQ LKQ+LVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ+GKVVAYASRQLKSHEQNYPT
Subjt:  GLAGYYRRFVEDFSRWATPLTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPT

Query:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI
        HDLELAA VFALKIWRHYLYGEKIQIFTDHKSLKY FTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ PLHRDLERAEI
Subjt:  HDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEI

Query:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK
        AVSVG VT QLAQLTVQPTLRQ+I+DAQS+DPYL+E+R L    Q  EFS+SSDGGL+FERRLCVP++S VK +LL EAH+SPFSMHPGSTKMYQDLK
Subjt:  AVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFSISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK

SwissProt top hitse value%identityAlignment
P04323 Retrovirus-related Pol polyprotein from transposon 17.65.6e-8338.69Show/hide
Query:  YRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRI
        Y    A  +E++ Q+Q++L++  IR S SP+ +P+  V KK+D S     R+ IDYR+LN++T+ + +P+P +D++  +L     F+ IDL  G+HQ+ +
Subjt:  YRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRI

Query:  RDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLG
            + KTAF +++ HYE++ M FGL NAPA F   MN + +  L+   +V++DDI+V+S +  EH + L  V E L    L  +  KCEF  ++  FLG
Subjt:  RDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFIDDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLG

Query:  HVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATPLTELTRKGTPF-VWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIY
        HV++ +G+  +  KIEA+  +  P+   E+++FLGL GYYR+F+ +F+  A P+T+  +K       +P  + +F+ LK  +   P+L VPD +  F + 
Subjt:  HVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATPLTELTRKGTPF-VWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIY

Query:  SDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPTHDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPG
        +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A V+A K +RHYL G   +I +DH+ L +L+  K+ N +  RW   + ++D +I Y  G
Subjt:  SDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPTHDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQKELNMRQRRWLELVKDYDCEILYHPG

Query:  KANVVADALSR
        K N VADALSR
Subjt:  KANVVADALSR

P0CT34 Transposon Tf2-1 polyprotein4.7e-8231.62Show/hide
Query:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC
        +++  EP    + +E+ D+  E +  +LP P + ++F +EL  +   +    Y + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ 
Subjt:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI
        +DY+ LNK    NIYPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     +E++VM +G++ APA F   +N +  +  ++ V+ ++
Subjt:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI

Query:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP
        DDIL++SK+++EH +H+  VL+ L+   L    +KCEF   QV F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S+   P
Subjt:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP

Query:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI
        L  L +K   + W+P    + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL QK        V Y S ++   + NY   D E+ A + +LK 
Subjt:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI

Query:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ
        WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I        + 
Subjt:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ

Query:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG
        + Q+++    + ++V   ++D  L+    L+  E  +++E     DG L+  + ++ +P ++ +   ++ + H     +HPG
Subjt:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG

P0CT35 Transposon Tf2-2 polyprotein4.7e-8231.62Show/hide
Query:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC
        +++  EP    + +E+ D+  E +  +LP P + ++F +EL  +   +    Y + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ 
Subjt:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI
        +DY+ LNK    NIYPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     +E++VM +G++ APA F   +N +  +  ++ V+ ++
Subjt:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI

Query:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP
        DDIL++SK+++EH +H+  VL+ L+   L    +KCEF   QV F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S+   P
Subjt:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP

Query:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI
        L  L +K   + W+P    + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL QK        V Y S ++   + NY   D E+ A + +LK 
Subjt:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI

Query:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ
        WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I        + 
Subjt:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ

Query:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG
        + Q+++    + ++V   ++D  L+    L+  E  +++E     DG L+  + ++ +P ++ +   ++ + H     +HPG
Subjt:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG

P0CT36 Transposon Tf2-3 polyprotein4.7e-8231.62Show/hide
Query:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC
        +++  EP    + +E+ D+  E +  +LP P + ++F +EL  +   +    Y + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ 
Subjt:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI
        +DY+ LNK    NIYPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     +E++VM +G++ APA F   +N +  +  ++ V+ ++
Subjt:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI

Query:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP
        DDIL++SK+++EH +H+  VL+ L+   L    +KCEF   QV F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S+   P
Subjt:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP

Query:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI
        L  L +K   + W+P    + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL QK        V Y S ++   + NY   D E+ A + +LK 
Subjt:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI

Query:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ
        WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I        + 
Subjt:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ

Query:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG
        + Q+++    + ++V   ++D  L+    L+  E  +++E     DG L+  + ++ +P ++ +   ++ + H     +HPG
Subjt:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG

P0CT41 Transposon Tf2-12 polyprotein4.7e-8231.62Show/hide
Query:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC
        +++  EP    + +E+ D+  E +  +LP P + ++F +EL  +   +    Y + P +++ +  ++ + L    IR S +    PV+FV KK+G++R+ 
Subjt:  TSLTSEP----VVREYPDVFPE-DLPRLP-PHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVKKKDGSMRLC

Query:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI
        +DY+ LNK    NIYPLP I+ L  ++QG+T+F+K+DL+S YH +R+R  D  K AFR     +E++VM +G++ APA F   +N +  +  ++ V+ ++
Subjt:  IDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFI

Query:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP
        DDIL++SK+++EH +H+  VL+ L+   L    +KCEF   QV F+G+ +S +G +     I+ V  W +P    E+R FLG   Y R+F+   S+   P
Subjt:  DDILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATP

Query:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI
        L  L +K   + W+P    + +N+KQ LV+ PVL   D S   ++ +DAS   +G VL QK        V Y S ++   + NY   D E+ A + +LK 
Subjt:  LTELTRKGTPFVWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGK-----VVAYASRQLKSHEQNYPTHDLELAAAVFALKI

Query:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ
        WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+ +D E   I        + 
Subjt:  WRHYLYG--EKIQIFTDHKSLKYLFTQKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQ

Query:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG
        + Q+++    + ++V   ++D  L+    L+  E  +++E     DG L+  + ++ +P ++ +   ++ + H     +HPG
Subjt:  LAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTE--QIDEFSISSDGGLMFER-RLCVPANSTVKIDLLDEAHNSPFSMHPG

Arabidopsis top hitse value%identityAlignment
ATMG00860.1 DNA/RNA polymerases superfamily protein3.5e-2443.51Show/hide
Query:  HLHKVLENLRVNKLYAKFSKCEFWLKQVAFLG--HVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATPLTELTRKGTPFVW
        HL  VL+    ++ YA   KC F   Q+A+LG  H++S EGVS D AK+EA+  W  P   +E+R FLGL GYYRRFV+++ +   PLTEL +K +   W
Subjt:  HLHKVLENLRVNKLYAKFSKCEFWLKQVAFLG--HVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATPLTELTRKGTPFVW

Query:  SPACEDSFQNLKQRLVTAPVLTVPDGSGSFV
        +     +F+ LK  + T PVL +PD    FV
Subjt:  SPACEDSFQNLKQRLVTAPVLTVPDGSGSFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTAGTAAACTGCTCAACCAGGGTACCTGGAGTATTTTGGCAAGTGTGGTGGATACTAGGGAAGATGAGACTTCTTTAACTTCAGAACCTGTGGTAAGAGAATA
CCCAGATGTGTTTCCAGAAGATCTTCCAAGACTACCGCCACATAGAGAGATTGATTTTGCCATTGAGTTGGAGCCAGACACTACTCCCATTTCTAGAGCCCCTTATAGGA
TGGCTCCTGCTGAGTTGAAAGAACTGAAGGTACAGTTACAGGAGTTGCTTGACAAAAGCTTTATTCGACCTAGTGTGTCGCCTTGGGGTGCACCAGTATTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGCATTGACTATAGAGAGTTGAATAAAGTAACAATCAAGAACATATATCCTTTACCCAGAATCGATGATTTGTTCAATCAGTTACA
GGGAGCCACGGTGTTCTCTAAGATTGACTTACGGTCAGGTTATCACCAGTTGAGGATTAGAGACCGTGATATTCCTAAGACTGCTTTTCGTTCGAGGTATGAACATTATG
AATTCATAGTAATGTCTTTTGGTTTGACTAATGCACCTGCAATATTTATGGATTTGATGAACATGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAGTCTTCATTGAT
GATATTTTGGTTTATTCCAAGACTAAGGCCGAACATGAGGAACACTTACATAAAGTGTTAGAGAATCTTCGAGTCAATAAACTTTATGCTAAATTCTCTAAGTGCGAATT
TTGGTTGAAGCAGGTGGCTTTTCTTGGTCATGTGGTTTCCAGTGAGGGAGTTTCTGTAGACCTTGCAAAGATAGAAGCGGTTACCAGTTGGTCTCGACCCTCTACAGTTA
GTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGGTACTACCGGAGGTTTGTGGAGGATTTTTCACGTTGGGCTACGCCCTTGACTGAGTTGACAAGGAAGGGAACTCCGTTT
GTTTGGAGTCCAGCTTGCGAGGATAGTTTTCAGAACCTTAAGCAAAGGTTAGTTACTGCACCGGTCCTTACAGTACCAGATGGATCCGGAAGTTTTGTGATTTACAGTGA
TGCTTCCAAGAAAGGACTGGGTTGTGTTTTGATGCAGAAAGGTAAGGTGGTTGCTTATGCCTCTCGTCAGTTGAAGAGTCACGAGCAGAACTACCCCACACATGATTTGG
AGTTGGCAGCAGCGGTTTTTGCATTGAAGATATGGAGACATTATTTGTACGGTGAAAAGATACAAATCTTTACTGACCATAAGAGCCTGAAGTACTTGTTCACTCAGAAG
GAGTTGAATATGAGACAGCGAAGGTGGCTCGAGTTGGTAAAGGATTATGACTGCGAGATATTGTACCATCCTGGTAAGGCGAATGTGGTGGCTGATGCTCTTAGTAGAAA
AGTATCACATTCGGCAGCACTCATTACTAGACAGGTACCGTTACATCGAGACTTGGAGAGAGCTGAGATTGCAGTATCTGTGGGGAGAGTCACCTCACAGTTAGCACAAT
TAACGGTGCAACCGACTCTGAGGCAGAAGATTGTTGATGCTCAGAGTAGTGATCCTTATTTGATGGAGAGACGTCGCCTTGTTGGAACAGAGCAGATTGATGAGTTCTCC
ATATCCTCTGATGGTGGATTGATGTTTGAGAGACGTTTGTGTGTGCCAGCGAACAGTACAGTTAAGATTGACTTACTAGATGAAGCCCATAATTCCCCATTTTCTATGCA
TCCTGGTAGCACGAAAATGTATCAGGATCTAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCTAGTAAACTGCTCAACCAGGGTACCTGGAGTATTTTGGCAAGTGTGGTGGATACTAGGGAAGATGAGACTTCTTTAACTTCAGAACCTGTGGTAAGAGAATA
CCCAGATGTGTTTCCAGAAGATCTTCCAAGACTACCGCCACATAGAGAGATTGATTTTGCCATTGAGTTGGAGCCAGACACTACTCCCATTTCTAGAGCCCCTTATAGGA
TGGCTCCTGCTGAGTTGAAAGAACTGAAGGTACAGTTACAGGAGTTGCTTGACAAAAGCTTTATTCGACCTAGTGTGTCGCCTTGGGGTGCACCAGTATTGTTTGTGAAG
AAGAAGGATGGGTCGATGCGCCTTTGCATTGACTATAGAGAGTTGAATAAAGTAACAATCAAGAACATATATCCTTTACCCAGAATCGATGATTTGTTCAATCAGTTACA
GGGAGCCACGGTGTTCTCTAAGATTGACTTACGGTCAGGTTATCACCAGTTGAGGATTAGAGACCGTGATATTCCTAAGACTGCTTTTCGTTCGAGGTATGAACATTATG
AATTCATAGTAATGTCTTTTGGTTTGACTAATGCACCTGCAATATTTATGGATTTGATGAACATGGTGTTTAAGGATTTCTTAGACACTTTTGTGATAGTCTTCATTGAT
GATATTTTGGTTTATTCCAAGACTAAGGCCGAACATGAGGAACACTTACATAAAGTGTTAGAGAATCTTCGAGTCAATAAACTTTATGCTAAATTCTCTAAGTGCGAATT
TTGGTTGAAGCAGGTGGCTTTTCTTGGTCATGTGGTTTCCAGTGAGGGAGTTTCTGTAGACCTTGCAAAGATAGAAGCGGTTACCAGTTGGTCTCGACCCTCTACAGTTA
GTGAGGTTCGTAGTTTTCTGGGTTTAGCAGGGTACTACCGGAGGTTTGTGGAGGATTTTTCACGTTGGGCTACGCCCTTGACTGAGTTGACAAGGAAGGGAACTCCGTTT
GTTTGGAGTCCAGCTTGCGAGGATAGTTTTCAGAACCTTAAGCAAAGGTTAGTTACTGCACCGGTCCTTACAGTACCAGATGGATCCGGAAGTTTTGTGATTTACAGTGA
TGCTTCCAAGAAAGGACTGGGTTGTGTTTTGATGCAGAAAGGTAAGGTGGTTGCTTATGCCTCTCGTCAGTTGAAGAGTCACGAGCAGAACTACCCCACACATGATTTGG
AGTTGGCAGCAGCGGTTTTTGCATTGAAGATATGGAGACATTATTTGTACGGTGAAAAGATACAAATCTTTACTGACCATAAGAGCCTGAAGTACTTGTTCACTCAGAAG
GAGTTGAATATGAGACAGCGAAGGTGGCTCGAGTTGGTAAAGGATTATGACTGCGAGATATTGTACCATCCTGGTAAGGCGAATGTGGTGGCTGATGCTCTTAGTAGAAA
AGTATCACATTCGGCAGCACTCATTACTAGACAGGTACCGTTACATCGAGACTTGGAGAGAGCTGAGATTGCAGTATCTGTGGGGAGAGTCACCTCACAGTTAGCACAAT
TAACGGTGCAACCGACTCTGAGGCAGAAGATTGTTGATGCTCAGAGTAGTGATCCTTATTTGATGGAGAGACGTCGCCTTGTTGGAACAGAGCAGATTGATGAGTTCTCC
ATATCCTCTGATGGTGGATTGATGTTTGAGAGACGTTTGTGTGTGCCAGCGAACAGTACAGTTAAGATTGACTTACTAGATGAAGCCCATAATTCCCCATTTTCTATGCA
TCCTGGTAGCACGAAAATGTATCAGGATCTAAAATGA
Protein sequenceShow/hide protein sequence
MKASKLLNQGTWSILASVVDTREDETSLTSEPVVREYPDVFPEDLPRLPPHREIDFAIELEPDTTPISRAPYRMAPAELKELKVQLQELLDKSFIRPSVSPWGAPVLFVK
KKDGSMRLCIDYRELNKVTIKNIYPLPRIDDLFNQLQGATVFSKIDLRSGYHQLRIRDRDIPKTAFRSRYEHYEFIVMSFGLTNAPAIFMDLMNMVFKDFLDTFVIVFID
DILVYSKTKAEHEEHLHKVLENLRVNKLYAKFSKCEFWLKQVAFLGHVVSSEGVSVDLAKIEAVTSWSRPSTVSEVRSFLGLAGYYRRFVEDFSRWATPLTELTRKGTPF
VWSPACEDSFQNLKQRLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQKGKVVAYASRQLKSHEQNYPTHDLELAAAVFALKIWRHYLYGEKIQIFTDHKSLKYLFTQK
ELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQVPLHRDLERAEIAVSVGRVTSQLAQLTVQPTLRQKIVDAQSSDPYLMERRRLVGTEQIDEFS
ISSDGGLMFERRLCVPANSTVKIDLLDEAHNSPFSMHPGSTKMYQDLK