; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5498 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5498
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationctg1269:394710..396582
RNA-Seq ExpressionCucsat.G5498
SyntenyCucsat.G5498
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]7.22e-54100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]2.07e-5398.97Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

XP_022140347.1 protein transport protein Sec61 subunit beta [Momordica charantia]1.18e-4083.51Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARG SQSQS++SS  T+RPGV APRGSAAATAGLRRRR  ST ++ S G+VG GSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]2.15e-4386.6Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]4.13e-4892.78Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta3.49e-54100Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

A0A1S3CKE5 Protein transport protein Sec61 subunit beta1.00e-5398.97Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

A0A5D3CTD4 Protein transport protein Sec61 subunit beta1.00e-5398.97Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

A0A6J1H102 Protein transport protein Sec61 subunit beta1.04e-4386.6Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

A0A6J1JZ65 Protein transport protein Sec61 subunit beta1.04e-4386.6Show/hide
Query:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARG SQSQS++SS  T+RPGVVAPRGSAAATAGLRRRR GSTS + +TGLV GGSSGGGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVF
Subjt:  MARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta8.8e-0645.05Show/hide
Query:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV
        SQSQ+ST      R    AP G+    AG  RRRP   S  + T      +      + FYTDD PG K+SP VV+ MSL FI FVT LHV
Subjt:  SQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV

P38389 Protein transport protein Sec61 subunit beta3.0e-1464.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV

P60467 Protein transport protein Sec61 subunit beta1.3e-0442.22Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

P60468 Protein transport protein Sec61 subunit beta1.3e-0442.22Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

Q9CQS8 Protein transport protein Sec61 subunit beta1.3e-0442.22Show/hide
Query:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        S T+ GS+ R    A    AA +   +R+    G+ SA  +T      S+G G M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++
Subjt:  SSTSSGSTARPGVVAPRGSAAATAGLRRRRP--GSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-1564.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-1564.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-1564.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein2.1e-1564.38Show/hide
Query:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV
        RGSAAATA +RRR+P       ++G  GGG+SGG  G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV
Subjt:  RGSAAATAGLRRRRPGSTSASASTGLVGGGSSGG--GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHV

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein7.6e-2976.53Show/hide
Query:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF
        MARG+SQSQ STS+G STARPG+ APRGSAAATAG+RRRR G     +S G  G G SG  NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVF
Subjt:  MARGASQSQSSTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTTTTGTCAATTCCCCCTTTCTTTTTGTTTTCTTTTTTTAATTTCCCACCGATCAGATTTTTCTCCCAAATTCACATATTTCCGATCATCTTCTCCGATTCTCAATTC
CATGGCCAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACTGCTGGCCTCCGTC
GCCGCCGTCCTGGCTCTACTTCTGCCTCCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGTAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTA
AAGATTTCTCCCACCGTCGTCCTCGTTATGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTTGTGAGTGAAGTGGAAAGTGTGCATGAAGGCATCTATTG
TTAA
mRNA sequenceShow/hide mRNA sequence
TATTTTTGTCAATTCCCCCTTTCTTTTTGTTTTCTTTTTTTAATTTCCCACCGATCAGATTTTTCTCCCAAATTCACATATTTCCGATCATCTTCTCCGATTCTCAATTC
CATGGCCAGAGGCGCTTCTCAATCCCAATCCTCAACCTCCTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCCACTGCTGGCCTCCGTC
GCCGCCGTCCTGGCTCTACTTCTGCCTCCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGCGGTAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTA
AAGATTTCTCCCACCGTCGTCCTCGTTATGAGCCTCTGCTTCATCGGCTTCGTCACTGGCCTCCACGTCTTTGTGAGTGAAGTGGAAAGTGTGCATGAAGGCATCTATTG
TTAA
Protein sequenceShow/hide protein sequence
YFCQFPLSFCFLFLISHRSDFSPKFTYFRSSSPILNSMARGASQSQSSTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSASASTGLVGGGSSGGGNMLRFYTDDAPGL
KISPTVVLVMSLCFIGFVTGLHVFVSEVESVHEGIYC