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Cucsat.G5515 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5515
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Genome locationctg1269:692686..698201
RNA-Seq ExpressionCucsat.G5515
SyntenyCucsat.G5515
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0070919 - production of siRNA involved in chromatin silencing by small RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0031380 - nuclear RNA-directed RNA polymerase complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51474.2 hypothetical protein Csa_008783 [Cucumis sativus]1.27e-4182.35Show/hide
Query:  PFRLSFRRSPAAPSFPFSPFAKQNHHRPTSIPLLLPVRSPAANRRLPSLPFSSSVRSPAANRRVSPTEAERRDPSPLLFSSQSSRTRPDLPPSRSAPQDR
        PFRLSFRRSPAAPSFPFSPFAKQN HRPTSIPLLLPVRSPAANRRL SLPFSSSVRSPAA     P         PLLFSSQSSRTRPDLPPSRSAPQDR
Subjt:  PFRLSFRRSPAAPSFPFSPFAKQNHHRPTSIPLLLPVRSPAANRRLPSLPFSSSVRSPAANRRVSPTEAERRDPSPLLFSSQSSRTRPDLPPSRSAPQDR

Query:  VV
         +
Subjt:  VV
XP_031741741.1 extensin-like [Cucumis sativus]6.19e-4282.35Show/hide
Query:  PFRLSFRRSPAAPSFPFSPFAKQNHHRPTSIPLLLPVRSPAANRRLPSLPFSSSVRSPAANRRVSPTEAERRDPSPLLFSSQSSRTRPDLPPSRSAPQDR
        PFRLSFRRSPAAPSFPFSPFAKQN HRPTSIPLLLPVRSPAANRRL SLPFSSSVRSPAA     P         PLLFSSQSSRTRPDLPPSRSAPQDR
Subjt:  PFRLSFRRSPAAPSFPFSPFAKQNHHRPTSIPLLLPVRSPAANRRLPSLPFSSSVRSPAANRRVSPTEAERRDPSPLLFSSQSSRTRPDLPPSRSAPQDR

Query:  VV
         +
Subjt:  VV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCCTTCCGTCTTTCTTTCCGCCGCAGCCCAGCCGCCCCATCCTTCCCCTTCTCTCCGTTCGCGAAGCAAAACCACCACCGACCGACCTCCATTCCTCTTCTCCTTCCCGT
TCGCAGCCCCGCCGCAAACCGTCGCCTCCCTTCCCTTCCATTTTCTTCTTCCGTCCGCAGCCCTGCCGCAAACCGCCGCGTCTCCCCTACTGAAGCCGAGCGCCGCGACC
CTTCTCCTCTTCTCTTCAGTTCGCAAAGCAGCCGTACGCGTCCAGATCTGCCGCCGTCCAGATCTGCACCGCAAGACCGCGTCGTTGCCCTTCCGCCGCTGCCCGGTCCA
GATTTGCGTCGCCGTGCACAGCCTCACCACCGCTGA
mRNA sequenceShow/hide mRNA sequence
CCCTTCCGTCTTTCTTTCCGCCGCAGCCCAGCCGCCCCATCCTTCCCCTTCTCTCCGTTCGCGAAGCAAAACCACCACCGACCGACCTCCATTCCTCTTCTCCTTCCCGT
TCGCAGCCCCGCCGCAAACCGTCGCCTCCCTTCCCTTCCATTTTCTTCTTCCGTCCGCAGCCCTGCCGCAAACCGCCGCGTCTCCCCTACTGAAGCCGAGCGCCGCGACC
CTTCTCCTCTTCTCTTCAGTTCGCAAAGCAGCCGTACGCGTCCAGATCTGCCGCCGTCCAGATCTGCACCGCAAGACCGCGTCGTTGCCCTTCCGCCGCTGCCCGGTCCA
GATTTGCGTCGCCGTGCACAGCCTCACCACCGCTGA
Protein sequenceShow/hide protein sequence
PFRLSFRRSPAAPSFPFSPFAKQNHHRPTSIPLLLPVRSPAANRRLPSLPFSSSVRSPAANRRVSPTEAERRDPSPLLFSSQSSRTRPDLPPSRSAPQDRVVALPPLPGP
DLRRRAQPHHR