; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5547 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5547
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionhistone H4
Genome locationctg1296:123881..130135
RNA-Seq ExpressionCucsat.G5547
SyntenyCucsat.G5547
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold
IPR019809 - Histone H4, conserved site
IPR035425 - CENP-T/Histone H4, histone fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS66043.1 Histone H4 [Triticum urartu]1.07e-6692.98Show/hide
Query:  CSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY
        C     ++PAT SGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY
Subjt:  CSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY

Query:  ALKRQGRTLYGFGG
        ALKRQGRTLYGFGG
Subjt:  ALKRQGRTLYGFGG

KAE8795759.1 Histone H4 [Hordeum vulgare]3.28e-6692.24Show/hide
Query:  HRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        H    +   +PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  HRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

Query:  VYALKRQGRTLYGFGG
        VYALKRQGRTLYGFGG
Subjt:  VYALKRQGRTLYGFGG

NP_001361476.1 histone H4-like [Macaca mulatta]1.30e-6591.23Show/hide
Query:  CSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY
        C+ IT+ +   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVY
Subjt:  CSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVY

Query:  ALKRQGRTLYGFGG
        ALKRQGRTLYGFGG
Subjt:  ALKRQGRTLYGFGG

XP_037462135.1 histone H4-like [Triticum dicoccoides]8.52e-6691.38Show/hide
Query:  HRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
        H    +   +PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV
Subjt:  HRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDV

Query:  VYALKRQGRTLYGFGG
         YALKRQGRTLYGFGG
Subjt:  VYALKRQGRTLYGFGG

XP_037480688.1 histone H4-like [Triticum dicoccoides]3.15e-6693.22Show/hide
Query:  PHRCSDITTKS-PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM
        PH      TK+ PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM
Subjt:  PHRCSDITTKS-PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM

Query:  DVVYALKRQGRTLYGFGG
        DVVYALKRQGRTLYGFGG
Subjt:  DVVYALKRQGRTLYGFGG

TrEMBL top hitse value%identityAlignment
A0A287TBB2 Histone H43.96e-6790.76Show/hide
Query:  LVPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
        LV    S +  + P+TMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
Subjt:  LVPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA

Query:  MDVVYALKRQGRTLYGFGG
        MDVVYALKRQGRTLYGFGG
Subjt:  MDVVYALKRQGRTLYGFGG

A0A452Z4Z9 Histone H44.43e-6792.44Show/hide
Query:  HRCSDITT---KSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
        HR SD TT      A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
Subjt:  HRCSDITT---KSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA

Query:  MDVVYALKRQGRTLYGFGG
        MDVVYALKRQGRTLYGFGG
Subjt:  MDVVYALKRQGRTLYGFGG

A0A452ZB12 Histone H41.13e-6790.68Show/hide
Query:  VPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM
        +PH     T + P+ MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM
Subjt:  VPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM

Query:  DVVYALKRQGRTLYGFGG
        DVVYALKRQGRTLYGFGG
Subjt:  DVVYALKRQGRTLYGFGG

A0A452ZB15 Histone H47.42e-6890.68Show/hide
Query:  VPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM
        +PH     T + P+ MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM
Subjt:  VPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAM

Query:  DVVYALKRQGRTLYGFGG
        DVVYALKRQGRTLYGFGG
Subjt:  DVVYALKRQGRTLYGFGG

A0A453EFA1 Histone H44.43e-6791.6Show/hide
Query:  HRCSDITTKS---PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
        HR SD T+     P+ MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA
Subjt:  HRCSDITTKS---PATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTA

Query:  MDVVYALKRQGRTLYGFGG
        MDVVYALKRQGRTLYGFGG
Subjt:  MDVVYALKRQGRTLYGFGG

SwissProt top hitse value%identityAlignment
P59259 Histone H46.1e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

P62785 Histone H4 variant TH0116.1e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Q6LAF3 Histone H46.1e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Q6PMI5 Histone H46.1e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Q6WZ83 Histone H46.1e-51100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein4.3e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT1G07820.1 Histone superfamily protein4.3e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT1G07820.2 Histone superfamily protein4.3e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT2G28740.1 histone H44.3e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT3G45930.1 Histone superfamily protein4.3e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATCGAAATCAAAATCAAAACTCACAACCGATTTAGTTCCACATCGCTGTTCTGATATAACCACCAAATCACCGGCGACAATGTCTGGACGTGGTAAGGGCGGTAAGGG
ATTAGGAAAGGGAGGAGCTAAGCGTCACAGGAAGGTTTTAAGAGATAACATTCAGGGCATTACCAAGCCTGCCATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAACGTA
TCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATCTTCCTTGAGAATGTTATTCGTGATGCTGTTACTTATACTGAGCATGCAAGGAGGAAGACGGTGACT
GCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGGAGAACTCTATATGGCTTTGGAGGTTAG
mRNA sequenceShow/hide mRNA sequence
TCATCGAAATCAAAATCAAAACTCACAACCGATTTAGTTCCACATCGCTGTTCTGATATAACCACCAAATCACCGGCGACAATGTCTGGACGTGGTAAGGGCGGTAAGGG
ATTAGGAAAGGGAGGAGCTAAGCGTCACAGGAAGGTTTTAAGAGATAACATTCAGGGCATTACCAAGCCTGCCATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAACGTA
TCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATCTTCCTTGAGAATGTTATTCGTGATGCTGTTACTTATACTGAGCATGCAAGGAGGAAGACGGTGACT
GCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGGAGAACTCTATATGGCTTTGGAGGTTAG
Protein sequenceShow/hide protein sequence
SSKSKSKLTTDLVPHRCSDITTKSPATMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVT
AMDVVYALKRQGRTLYGFGG