; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5549 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5549
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionhistone H4
Genome locationctg1296:151588..156640
RNA-Seq ExpressionCucsat.G5549
SyntenyCucsat.G5549
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold
IPR019809 - Histone H4, conserved site
IPR035425 - CENP-T/Histone H4, histone fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7564665.1 Histone H4, partial [Arabidopsis suecica]1.11e-6498.11Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
         E MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

QHO21901.1 Histone [Arachis hypogaea]1.05e-6498.11Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        + AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

XP_007133241.1 hypothetical protein PHAVU_011G163600g, partial [Phaseolus vulgaris]1.34e-6599.06Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        VE MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

XP_007133245.1 hypothetical protein PHAVU_011G164000g [Phaseolus vulgaris]2.56e-6599.06Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        VE MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

XP_042793581.1 histone H4-like [Panthera leo]1.22e-6497.17Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        V AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

TrEMBL top hitse value%identityAlignment
A0A452XX37 Histone H45.60e-6598.11Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        + AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

A0A453MYW1 Histone H44.14e-6599.05Show/hide
Query:  EAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
        E MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL
Subjt:  EAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL

Query:  YGFGG
        YGFGG
Subjt:  YGFGG

A0A453MZN3 Histone H45.53e-65100Show/hide
Query:  AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
        AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY
Subjt:  AMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLY

Query:  GFGG
        GFGG
Subjt:  GFGG

V7AI73 Histone H41.24e-6599.06Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        VE MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

V7AJ24 Histone H4 (Fragment)6.50e-6699.06Show/hide
Query:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
        VE MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Subjt:  VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT

Query:  LYGFGG
        LYGFGG
Subjt:  LYGFGG

SwissProt top hitse value%identityAlignment
P59259 Histone H41.1e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

P62785 Histone H4 variant TH0111.1e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Q6LAF3 Histone H41.1e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Q6PMI5 Histone H41.1e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Q6WZ83 Histone H41.1e-50100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein7.8e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT1G07820.1 Histone superfamily protein7.8e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT1G07820.2 Histone superfamily protein7.8e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT2G28740.1 histone H47.8e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG

AT3G45930.1 Histone superfamily protein7.8e-52100Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYG

Query:  FGG
        FGG
Subjt:  FGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGAAGCAATGTCTGGACGAGGTAAGGGAGGCAAGGGATTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTTTTGCGAGATAACATTCAGGGCATTACAAAGCCTGC
TATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTG
TTACCTACACAGAGCACGCCAGGAGAAAGACGGTGACTGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGAACCTTGTATGGTTTTGGAGGTTAG
mRNA sequenceShow/hide mRNA sequence
GTTGAAGCAATGTCTGGACGAGGTAAGGGAGGCAAGGGATTGGGAAAAGGAGGAGCAAAGCGTCACAGGAAGGTTTTGCGAGATAACATTCAGGGCATTACAAAGCCTGC
TATTCGTCGTTTGGCTCGTAGAGGTGGTGTGAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTTGAGAATGTGATTCGTGATGCTG
TTACCTACACAGAGCACGCCAGGAGAAAGACGGTGACTGCCATGGATGTGGTTTATGCTTTGAAAAGGCAGGGAAGAACCTTGTATGGTTTTGGAGGTTAG
Protein sequenceShow/hide protein sequence
VEAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG