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Cucsat.G5591 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5591
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionMitochondrial 28S Ribosomal protein
Genome locationctg1299:26261..28521
RNA-Seq ExpressionCucsat.G5591
SyntenyCucsat.G5591
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR032053 - Mitochondrial 28S ribosomal protein S34


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143137.1 uncharacterized protein LOC101207989 [Cucumis sativus]6.73e-98100Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

XP_008464074.1 PREDICTED: uncharacterized protein LOC103502049 [Cucumis melo]1.78e-9395.17Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRTAISRALDFSRLSSSF+RTF+SSSPSTSSSNPNASP+SSQTKRRKKKKNLFEV+QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        IAHKNG PIVEAPKKISGVHKRCWKYIASLP  GESKTSAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

XP_022944512.1 uncharacterized protein LOC111448948 [Cucurbita moschata]1.90e-7982.07Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        M+VANR+AIS AL FSRLSSSF R+F++SSPS S+ NPNA   S++TKRRKKKKNLFEVVQFLPNWGVGYHVAK+HWDEISYQITK+NLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        +AHK+GT I EAPKKISGVHKRCWKYIASLP SG+S  SAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

XP_023532313.1 uncharacterized protein LOC111794505 [Cucurbita pepo subsp. pepo]9.17e-7877.56Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRT ISRALDFSRL+SSF+R FS+S+ STSSS+P+AS  +S+ KRRKKKKNLFEV+QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHS-----------GESKTSAEVQTS
        IAHKNG PI EAPKKISGVHKRCWKYI SLP S           GES  SAE QTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHS-----------GESKTSAEVQTS

XP_038900676.1 uncharacterized protein LOC120087826 [Benincasa hispida]1.34e-8689.51Show/hide
Query:  VANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIA
        VANRTAISRALDFSRLSS+F+RTFS+SSPSTSSSNPNAS  S++ KRRKKKKNLFEVVQFLPNWGVGYHVAK+HWDEISYQITKINLYK+GTHGKAWGIA
Subjt:  VANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIA

Query:  HKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        HK+GTPI EAPKKISGVHKRCWKYIASLP SGES  SAEVQTS
Subjt:  HKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

TrEMBL top hitse value%identityAlignment
A0A0A0KH76 Uncharacterized protein3.26e-98100Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

A0A1S3CKN2 uncharacterized protein LOC1035020498.63e-9495.17Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRTAISRALDFSRLSSSF+RTF+SSSPSTSSSNPNASP+SSQTKRRKKKKNLFEV+QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        IAHKNG PIVEAPKKISGVHKRCWKYIASLP  GESKTSAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

A0A5A7V0Y6 Uncharacterized protein8.63e-9495.17Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRTAISRALDFSRLSSSF+RTF+SSSPSTSSSNPNASP+SSQTKRRKKKKNLFEV+QFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        IAHKNG PIVEAPKKISGVHKRCWKYIASLP  GESKTSAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

A0A6J1FVV3 uncharacterized protein LOC1114489489.19e-8082.07Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        M+VANR+AIS AL FSRLSSSF R+F++SSPS S+ NPNA   S++TKRRKKKKNLFEVVQFLPNWGVGYHVAK+HWDEISYQITK+NLYKSGTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        +AHK+GT I EAPKKISGVHKRCWKYIASLP SG+S  SAEVQTS
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

A0A6J1G714 uncharacterized protein LOC1114514484.44e-7877.56Show/hide
Query:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG
        MAVANRT ISRALDFSRL+SSF+R FS+S+ STSSS+P+AS  +S+ KRRKKKKNLFEV+QFLPNWGVGYHVAK HWDEISYQITKINLYK+GTHGKAWG
Subjt:  MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWG

Query:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHS-----------GESKTSAEVQTS
        IAHKNG PI EAPKKISGVHKRCWKYI SLP S           GES  SAEVQ+S
Subjt:  IAHKNGTPIVEAPKKISGVHKRCWKYIASLPHS-----------GESKTSAEVQTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G52370.1 unknown protein6.1e-3956.46Show/hide
Query:  MAVANRTAISR--ALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKA
        M + NR AISR   +   RLS + +R FS++  S + S+ ++ P      +R+KKKNL EV QFLPNWG+GYH+AK+HW+ ISY+ITKINLYK G HGKA
Subjt:  MAVANRTAISR--ALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKA

Query:  WGIAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        WGI HK+G    EAPKKISGVHKRCWKYI +L  +  + TSA VQ +
Subjt:  WGIAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS

AT5G58990.1 unknown protein2.7e-3957.43Show/hide
Query:  MAVANRTAISR--ALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTK-RRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGK
        M + NR AISR   +    LS S +R F S++PS +S+  + +P+S   K +R+KKKNL EV QFLPNWG+GYH+AK+HW+ ISY+ITKINLYK G HGK
Subjt:  MAVANRTAISR--ALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTK-RRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGK

Query:  AWGIAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS
        AWGI HK+G    EAPKKISGVHKRCWKYI +L  +  + T+A+VQ +
Subjt:  AWGIAHKNGTPIVEAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTATCTTCTTCCTTTGTCAGAACCTTCAGCTCCTCTTCTCCCTCAACCTCCTCTTCCAA
CCCCAATGCCTCCCCTACTTCGTCTCAAACCAAACGGAGGAAGAAGAAGAAGAACCTCTTCGAAGTAGTTCAGTTTTTGCCCAACTGGGGAGTTGGATACCATGTCGCCA
AATCTCACTGGGATGAAATTTCCTACCAGATCACCAAAATCAATCTCTACAAGAGTGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAAATGGCACGCCGATTGTC
GAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGCTGGAAGTATATCGCTAGCTTGCCGCATTCGGGAGAAAGCAAAACATCAGCCGAAGTTCAAACTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTCGCCAACAGAACTGCGATCAGTCGAGCCCTAGATTTCTCCAGGTTATCTTCTTCCTTTGTCAGAACCTTCAGCTCCTCTTCTCCCTCAACCTCCTCTTCCAA
CCCCAATGCCTCCCCTACTTCGTCTCAAACCAAACGGAGGAAGAAGAAGAAGAACCTCTTCGAAGTAGTTCAGTTTTTGCCCAACTGGGGAGTTGGATACCATGTCGCCA
AATCTCACTGGGATGAAATTTCCTACCAGATCACCAAAATCAATCTCTACAAGAGTGGCACGCACGGCAAGGCATGGGGCATTGCTCATAAAAATGGCACGCCGATTGTC
GAAGCTCCAAAGAAAATCAGCGGAGTTCACAAGCGCTGCTGGAAGTATATCGCTAGCTTGCCGCATTCGGGAGAAAGCAAAACATCAGCCGAAGTTCAAACTTCATGA
Protein sequenceShow/hide protein sequence
MAVANRTAISRALDFSRLSSSFVRTFSSSSPSTSSSNPNASPTSSQTKRRKKKKNLFEVVQFLPNWGVGYHVAKSHWDEISYQITKINLYKSGTHGKAWGIAHKNGTPIV
EAPKKISGVHKRCWKYIASLPHSGESKTSAEVQTS