; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5666 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5666
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationctg1402:294796..295846
RNA-Seq ExpressionCucsat.G5666
SyntenyCucsat.G5666
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]1.08e-3835.04Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V +  F PL DA +LLT I+ +ADV  +    S+IA+  S  FVA+L +    F NY +D    +S++SL + H ++       FSSM + V +S+ 
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ
         +   + N        D   +  L LSP Q  +L Q++  +  FFT++S   R+II E+    D  V V+ T+++VKFSI S EI +T + G C+I+GY+
Subjt:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ

Query:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF
        GE ET   I   P  FFL+    +  +WF+KT  + ++IS+     Y  Y ++F
Subjt:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF

XP_008458264.1 PREDICTED: uncharacterized protein LOC103497732 [Cucumis melo]5.42e-7161.58Show/hide
Query:  ATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKS
        ATLFFVS+ NF+PLADAAAL +NI +EADV++SRTQ S+I    S WFVA LHIWEPFF +YYID+D ITSRISLP  H  +NRAR    SSM +R+QK 
Subjt:  ATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKS

Query:  QNFLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFV-VVSVTNSQVKFSIPSIEIILTTQDGECQII
         N+LF EF NS        +  YRR+FLSPS+  +L+Q QID+QNFF+IHS+DFRRIITEVSHLP+  V VV+VTNSQVKFS+ S EIILT +    ++ 
Subjt:  QNFLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFV-VVSVTNSQVKFSIPSIEIILTTQDGECQII

Query:  GYQ
         Y+
Subjt:  GYQ

XP_022958857.1 uncharacterized protein LOC111460011 [Cucurbita moschata]9.52e-4338.19Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V + +F PL +A ++L  I++EAD++ S ++FS+I +  SH FVA+  I   FFANY++D +  +SR+SL + ++++       FSSM +   ++ +
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ
         +  +F +S    +    + +R L LSPSQ   L QIQ  H  FF+I S DFR IIT +   P+  + VS+T+S+VKF   S E ILT + G C I+GY+
Subjt:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ

Query:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF
        G+ E  F+I L+P  FF +L+  +  IWF+KTI +  +I I        Y I+F
Subjt:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF

XP_023006010.1 uncharacterized protein LOC111498887 [Cucurbita maxima]1.06e-4138.58Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V + +F PL +A +LL  I++EAD++ S ++FS+I +  S  FVA+  I   FFANY +D +  +SR+SL + + ++       FSSM +   ++ +
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ
         +  +F +S    +    + +R L LSPSQ   L QIQ  H  FF+I S DFR IIT +   P+  + VS+T+S+VKF   S E ILT + G C IIGY+
Subjt:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ

Query:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF
        GE E  F+I L+P  FF +L+  +  IWF+KTI +  +I +        Y I+F
Subjt:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF

XP_023548334.1 uncharacterized protein LOC111807002 [Cucurbita pepo subsp. pepo]9.52e-4338.19Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V + +F PL +A ++L  I+HEAD++ S ++FS+I +  S  FVA+  I   FFANY++D +  +SR+SL + ++++       FSSM +   ++ +
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ
         +  +F +S    +    + +R L LSPSQ   L QIQ  H  FF+I S DFR I+T +   P+  + VS+T+SQVKF   S E ILT + G C I+GY+
Subjt:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ

Query:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF
        G+ E  F+I L+P  FF +L+  +  IWF+KTI +  +I I        Y I+F
Subjt:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF

TrEMBL top hitse value%identityAlignment
A0A0A0KB79 Uncharacterized protein6.09e-73100Show/hide
Query:  MTRATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRV
        MTRATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRV
Subjt:  MTRATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRV

Query:  QKSQNFLFFEFTNS
        QKSQNFLFFEFTNS
Subjt:  QKSQNFLFFEFTNS

A0A1S3C7K5 uncharacterized protein LOC1034977322.62e-7161.58Show/hide
Query:  ATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKS
        ATLFFVS+ NF+PLADAAAL +NI +EADV++SRTQ S+I    S WFVA LHIWEPFF +YYID+D ITSRISLP  H  +NRAR    SSM +R+QK 
Subjt:  ATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKS

Query:  QNFLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFV-VVSVTNSQVKFSIPSIEIILTTQDGECQII
         N+LF EF NS        +  YRR+FLSPS+  +L+Q QID+QNFF+IHS+DFRRIITEVSHLP+  V VV+VTNSQVKFS+ S EIILT +    ++ 
Subjt:  QNFLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFV-VVSVTNSQVKFSIPSIEIILTTQDGECQII

Query:  GYQ
         Y+
Subjt:  GYQ

A0A1S3C8J1 uncharacterized protein LOC1034980103.49e-3636.75Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V ++ F PL DA +LL  +A +ADV+ +     II +  S  FVA+L +    F N+ +D +  +S++SL   H ++       FSSM + +  + N
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEF---TNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQII
         +   F   ++ +P         +  L LSP Q  NL Q++  + NFFT+ S + RRII E+       V V+VT SQVKFSI S EIILT + G C+I+
Subjt:  FLFFEF---TNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQII

Query:  GYQGEVETRFRIILHPTSFFLSL---ATNSEDIW
        GY+GEVET+ +++L P  FFL+    A      W
Subjt:  GYQGEVETRFRIILHPTSFFLSL---ATNSEDIW

A0A6J1H2Z8 uncharacterized protein LOC1114600114.61e-4338.19Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V + +F PL +A ++L  I++EAD++ S ++FS+I +  SH FVA+  I   FFANY++D +  +SR+SL + ++++       FSSM +   ++ +
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ
         +  +F +S    +    + +R L LSPSQ   L QIQ  H  FF+I S DFR IIT +   P+  + VS+T+S+VKF   S E ILT + G C I+GY+
Subjt:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ

Query:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF
        G+ E  F+I L+P  FF +L+  +  IWF+KTI +  +I I        Y I+F
Subjt:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF

A0A6J1KZ05 uncharacterized protein LOC1114988875.13e-4238.58Show/hide
Query:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN
        +F V + +F PL +A +LL  I++EAD++ S ++FS+I +  S  FVA+  I   FFANY +D +  +SR+SL + + ++       FSSM +   ++ +
Subjt:  LFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQN

Query:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ
         +  +F +S    +    + +R L LSPSQ   L QIQ  H  FF+I S DFR IIT +   P+  + VS+T+S+VKF   S E ILT + G C IIGY+
Subjt:  FLFFEFTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQ

Query:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF
        GE E  F+I L+P  FF +L+  +  IWF+KTI +  +I +        Y I+F
Subjt:  GEVETRFRIILHPTSFFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCGTGCCACCTTGTTCTTTGTCAGCATTGACAATTTTTCTCCTCTTGCAGACGCAGCCGCTCTACTCACTAATATTGCTCATGAAGCCGACGTTGAAATCTCACG
CACACAGTTTTCCATAATCGCCACAGGATATTCCCATTGGTTCGTCGCTTCGCTGCATATTTGGGAACCGTTTTTCGCCAACTATTATATCGATGAAGATCCAATCACTT
CAAGAATTTCTCTCCCAGCACTCCATCATTCTTTGAATCGAGCAAGAAATGCTCGTTTTTCTTCAATGATCATGCGTGTGCAGAAAAGCCAAAACTTCCTATTCTTTGAA
TTTACAAATTCAATCCCTGTAGGAGATGATAGAGATGAAAGATTTTATCGGAGATTGTTTTTGTCACCTTCACAAGGGGTGAATTTAAGCCAAATTCAAATTGATCATCA
AAATTTTTTCACCATTCATTCAAACGATTTTAGACGCATAATAACAGAAGTTTCTCATTTGCCAGATGGTTTTGTTGTTGTTAGTGTTACCAATTCACAAGTCAAGTTCT
CTATTCCATCTATAGAGATTATTCTTACCACACAGGATGGAGAATGTCAAATTATAGGGTACCAAGGAGAAGTCGAAACTCGGTTTCGAATCATTCTCCATCCGACCTCG
TTTTTCCTTTCATTGGCAACTAATTCAGAGGATATTTGGTTTCATAAGACAATTACTAACTTTGCTATAATCTCTATCCAAACCTTAGAATGTTATATTGATTATGCAAT
CCATTTTCTCAATATATGA
mRNA sequenceShow/hide mRNA sequence
ATGACCCGTGCCACCTTGTTCTTTGTCAGCATTGACAATTTTTCTCCTCTTGCAGACGCAGCCGCTCTACTCACTAATATTGCTCATGAAGCCGACGTTGAAATCTCACG
CACACAGTTTTCCATAATCGCCACAGGATATTCCCATTGGTTCGTCGCTTCGCTGCATATTTGGGAACCGTTTTTCGCCAACTATTATATCGATGAAGATCCAATCACTT
CAAGAATTTCTCTCCCAGCACTCCATCATTCTTTGAATCGAGCAAGAAATGCTCGTTTTTCTTCAATGATCATGCGTGTGCAGAAAAGCCAAAACTTCCTATTCTTTGAA
TTTACAAATTCAATCCCTGTAGGAGATGATAGAGATGAAAGATTTTATCGGAGATTGTTTTTGTCACCTTCACAAGGGGTGAATTTAAGCCAAATTCAAATTGATCATCA
AAATTTTTTCACCATTCATTCAAACGATTTTAGACGCATAATAACAGAAGTTTCTCATTTGCCAGATGGTTTTGTTGTTGTTAGTGTTACCAATTCACAAGTCAAGTTCT
CTATTCCATCTATAGAGATTATTCTTACCACACAGGATGGAGAATGTCAAATTATAGGGTACCAAGGAGAAGTCGAAACTCGGTTTCGAATCATTCTCCATCCGACCTCG
TTTTTCCTTTCATTGGCAACTAATTCAGAGGATATTTGGTTTCATAAGACAATTACTAACTTTGCTATAATCTCTATCCAAACCTTAGAATGTTATATTGATTATGCAAT
CCATTTTCTCAATATATGA
Protein sequenceShow/hide protein sequence
MTRATLFFVSIDNFSPLADAAALLTNIAHEADVEISRTQFSIIATGYSHWFVASLHIWEPFFANYYIDEDPITSRISLPALHHSLNRARNARFSSMIMRVQKSQNFLFFE
FTNSIPVGDDRDERFYRRLFLSPSQGVNLSQIQIDHQNFFTIHSNDFRRIITEVSHLPDGFVVVSVTNSQVKFSIPSIEIILTTQDGECQIIGYQGEVETRFRIILHPTS
FFLSLATNSEDIWFHKTITNFAIISIQTLECYIDYAIHFLNI