CuGenDBv2

Gene ID	Cucsat.G5672
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Protein TonB like
Genome location	ctg1402:356342..359005
RNA-Seq Expression	Cucsat.G5672
Synteny	Cucsat.G5672
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021013 - ATPase, vacuolar ER assembly factor, Vma12

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138504.1 uncharacterized protein LOC101222938 [Cucumis sativus]

7.96e-135

100

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

XP_008458236.1 PREDICTED: uncharacterized protein LOC103497719 [Cucumis melo]

3.78e-133

98.54

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH LPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDL SQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

XP_022959366.1 uncharacterized protein LOC111460360 [Cucurbita moschata]

1.06e-123

91.75

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGLV++HTEAIRSFLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_023548168.1 uncharacterized protein LOC111806888 [Cucurbita pepo subsp. pepo]

1.50e-123

91.26

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGLV++HTEAIRSFLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKP+DEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

XP_038876067.1 uncharacterized protein LOC120068388 [Benincasa hispida]

7.77e-126

94.66

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH  PSGLVLS+TEAIRSFLTSASIDSQLSDELRQIASDL SQ+NIPYK LRAIWFA ESS RPDLLRLLAGSEFV TSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPI+EPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSS S
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K7F5 Uncharacterized protein

3.85e-135

100

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A1S3C6X8 uncharacterized protein LOC103497719

1.83e-133

98.54

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH LPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDL SQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A5D3BV73 Uncharacterized protein

1.83e-133

98.54

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MINDH LPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDL SQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYL+GYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKKSQ
Subjt:  KLKKSQ

A0A6J1H4N6 uncharacterized protein LOC111460360

5.11e-124

91.75

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGLV++HTEAIRSFLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLKKLA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

A0A6J1L0S3 uncharacterized protein LOC111499322

3.44e-122

90.29

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Query:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA
        MIND A PSGLV++HTEAIR+FLTSASIDS++S+ELRQ+AS+L SQ N+PYK LRAIWFATESSTRPDLLRLL GSEFVFTSPKPREKSEELKARLK LA
Subjt:  MINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLA

Query:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS
        DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGY LFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIR+S+YDNRSSSSSRS
Subjt:  DVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSSRS

Query:  KLKKSQ
        KLKK+Q
Subjt:  KLKKSQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G52980.1 CONTAINS InterPro DOMAIN/s: ATPase, vacuolar ER assembly factor, Vma12 (InterPro:IPR021013); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

4.6e-68

72.63

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Query:  SGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAY
        SGL+LS TE +RSFL  AS D +LSDELR IASDL S+  IPYKLLRAIW  ++ STRPDLL L +GS FVFTSPKPREKSEELK RL KL ++AERK Y
Subjt:  SGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEFVFTSPKPREKSEELKARLKKLADVAERKAY

Query:  QELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSS
         ELVKDI PKK ++EPFSSYKDQLGFGLHV L MFTGYLVGYA FRALF  +P +SAAGGILGLV  MLVETLLFII++S  D   SS S
Subjt:  QELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSSNYDNRSSSSS

Sequences

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CDS sequence

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CATGAGAAAAAGAGTTGCCTTGAGCGCTCGTCTTCCACCCGTCTCGTCGGCGCCAACGATATCGCTGCTCTCAAACTGGCACGACCCCTTTCTACGATGATCAACGACCA
CGCACTTCCCTCAGGTCTTGTTCTGTCTCACACCGAAGCAATTCGCTCCTTTCTCACCTCGGCGTCAATAGATTCACAGCTTTCTGACGAACTCCGGCAGATTGCTTCAG
ATCTCGTTTCACAACGCAACATTCCGTATAAGCTGCTGAGAGCTATCTGGTTTGCTACGGAATCGTCCACACGGCCGGACTTGCTCCGTCTTTTGGCTGGATCAGAGTTC
GTCTTTACAAGCCCTAAACCCAGGGAGAAGAGTGAGGAGTTAAAGGCTAGACTGAAGAAGCTTGCAGATGTAGCAGAGAGGAAGGCCTATCAGGAACTAGTGAAAGATAT
TGCACCTAAGAAACCAATTGATGAGCCTTTCTCTTCCTACAAGGATCAGCTCGGATTCGGTTTACATGTCGTGTTGATAATGTTTACCGGCTATCTTGTTGGGTATGCTT
TATTCCGAGCATTGTTTAGGCATGATCCAATCATGAGTGCCGCTGGAGGTATCCTTGGATTAGTTTTCGGCATGCTCGTAGAAACACTTCTTTTCATCATTCGATCATCC
AATTACGATAATCGGTCTTCATCATCTTCCCGTTCTAAGCTGAAGAAGAGTCAGTAG

mRNA sequence

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Protein sequence

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HEKKSCLERSSSTRLVGANDIAALKLARPLSTMINDHALPSGLVLSHTEAIRSFLTSASIDSQLSDELRQIASDLVSQRNIPYKLLRAIWFATESSTRPDLLRLLAGSEF
VFTSPKPREKSEELKARLKKLADVAERKAYQELVKDIAPKKPIDEPFSSYKDQLGFGLHVVLIMFTGYLVGYALFRALFRHDPIMSAAGGILGLVFGMLVETLLFIIRSS
NYDNRSSSSSRSKLKKSQ

Cucsat.G5672 (gene) of Cucumber (B10) v3 genome