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Cucsat.G5734 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5734
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptiontranscription factor SCREAM2-like isoform X1
Genome locationctg1402:1478098..1479692
RNA-Seq ExpressionCucsat.G5734
SyntenyCucsat.G5734
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004138402.1 uncharacterized protein LOC101218918 isoform X2 [Cucumis sativus]3.22e-7897.69Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPM VTVERVVKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        EVFEELGLNVIEARVSCTHTFQLQAIGE+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

XP_011656425.1 uncharacterized protein LOC101218918 isoform X1 [Cucumis sativus]8.57e-8198.46Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        EVFEELGLNVIEARVSCTHTFQLQAIGE+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

XP_016901983.1 PREDICTED: uncharacterized protein LOC103496601 [Cucumis melo]2.52e-7595.38Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAAALHDNLQLLRSITNS   NKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPM VTVERVVKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        EVFEELGLNVIEARVSCTHTFQLQAIGE+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

XP_038884496.1 uncharacterized protein LOC120075304 isoform X1 [Benincasa hispida]5.01e-6989.55Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNS---NPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLL
        MVSREHKKA  LH+ LQLLRSITNSH+ LNKASIIVDASKYIEELKQKVERLNQDISTVQNS   NPLSHQYSPMQVTVER+VKGFSINVFSEKSCQGLL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNS---NPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLL

Query:  VSILEVFEELGLNVIEARVSCTHTFQLQAIGEVR
        VSILEVFEELGLNVIEARVSCT TFQLQAI E+ 
Subjt:  VSILEVFEELGLNVIEARVSCTHTFQLQAIGEVR

XP_038884497.1 uncharacterized protein LOC120075304 isoform X2 [Benincasa hispida]7.23e-7190.23Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNS---NPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLV
        MVSREHKKA  LH+ LQLLRSITNSH+LNKASIIVDASKYIEELKQKVERLNQDISTVQNS   NPLSHQYSPMQVTVER+VKGFSINVFSEKSCQGLLV
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNS---NPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLV

Query:  SILEVFEELGLNVIEARVSCTHTFQLQAIGEVR
        SILEVFEELGLNVIEARVSCT TFQLQAI E+ 
Subjt:  SILEVFEELGLNVIEARVSCTHTFQLQAIGEVR

TrEMBL top hitse value%identityAlignment
A0A0A0K8N7 Uncharacterized protein4.15e-8198.46Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        EVFEELGLNVIEARVSCTHTFQLQAIGE+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

A0A1S4E185 uncharacterized protein LOC1034966011.22e-7595.38Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAAALHDNLQLLRSITNS   NKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPM VTVERVVKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        EVFEELGLNVIEARVSCTHTFQLQAIGE+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

A0A6J1HIH6 uncharacterized protein LOC111464709 isoform X17.79e-6283.08Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAA LH+ LQLLRSITNSH+LNK SIIVDASKYIEELKQKVERLNQDI+TVQNS    H   PMQVTVE +VKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        E FEELGLNV+EARVSCT TFQLQA  E+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

A0A6J1JV46 uncharacterized protein LOC111487778 isoform X17.79e-6283.08Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHKKAA LH+ LQLLRSITNSH+LNK SIIVDASKYIEELKQKVERLNQDI+TVQNS    H   PMQVTVE +VKGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        E FEELGLNV+EARVSCT TFQLQA  E+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

A0A6J1K013 uncharacterized protein LOC111489817 isoform X22.72e-5981.54Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREH  AA LH NLQLLRSITNSH+LNKASIIVDASKYIEELKQKVERLNQDISTVQ S        PMQVTVE + KGFSINVFSEKSCQGLLVSIL
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR
        E FEELGLNV+EARVSCT +FQLQAI E+ 
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIGEVR

SwissProt top hitse value%identityAlignment
Q9LPW3 Transcription factor SCREAM21.1e-0426.53Show/hide
Query:  EHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVE---------------------------
        E ++   L+D L +LRS+    S +++ASI+ DA  Y++EL Q++  L+ ++ +   S+   H  +P   T+                            
Subjt:  EHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVE---------------------------

Query:  RVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHTFQL
        R  K  +I++F  +   GLL+S +   + LGL+V +A +SC + F L
Subjt:  RVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHTFQL

Q9LSL1 Transcription factor bHLH931.9e-0428.06Show/hide
Query:  EHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSH-----------------QYSPMQVTVERVVKGFSINV
        E ++   L+D L +LRSI    S +++ SI+ DA  Y++EL  K+ +L  +   + NSN   H                 + SP +  ++R  +   +++
Subjt:  EHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSH-----------------QYSPMQVTVERVVKGFSINV

Query:  FSEKSCQGLLVSILEVFEELGLNVIEARVSCTHTFQLQA
               GLL+S +   E LGL + +  +SC   F LQA
Subjt:  FSEKSCQGLLVSILEVFEELGLNVIEARVSCTHTFQLQA

Q9LXA9 Transcription factor bHLH611.2e-0630Show/hide
Query:  EHKKAAALHDNLQLLRSIT-NSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLS---HQYSPMQVTVERVVKGFSINVFSEKSC---QGLLV
        E ++   L+D L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D   + +++ LS      S ++ +++  V    +N   +  C    GL+V
Subjt:  EHKKAAALHDNLQLLRSIT-NSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLS---HQYSPMQVTVERVVKGFSINVFSEKSC---QGLLV

Query:  SILEVFEELGLNVIEARVSCTHTFQLQA----IGEVRFSI
        S +   E LGL + +  +SC   F LQA    +GE R+ +
Subjt:  SILEVFEELGLNVIEARVSCTHTFQLQA----IGEVRFSI

Arabidopsis top hitse value%identityAlignment
AT1G12860.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.9e-0626.53Show/hide
Query:  EHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVE---------------------------
        E ++   L+D L +LRS+    S +++ASI+ DA  Y++EL Q++  L+ ++ +   S+   H  +P   T+                            
Subjt:  EHKKAAALHDNLQLLRSITNSHS-LNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVE---------------------------

Query:  RVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHTFQL
        R  K  +I++F  +   GLL+S +   + LGL+V +A +SC + F L
Subjt:  RVVKGFSINVFSEKSCQGLLVSILEVFEELGLNVIEARVSCTHTFQL

AT1G29270.1 unknown protein1.2e-0934.11Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITN-SHSLNKASIIV-DASKYIEELKQKVERLNQDISTVQNSNPLS-HQYSPMQVTVERVVKGFSINVFSEKSCQGLLV
        MV+ E KK A+       L+++T+   S+++ S+++ +A  YI  LK ++E L ++   ++ +   S HQ+   +V VE++ + F + + S +  +  LV
Subjt:  MVSREHKKAAALHDNLQLLRSITN-SHSLNKASIIV-DASKYIEELKQKVERLNQDISTVQNSNPLS-HQYSPMQVTVERVVKGFSINVFSEKSCQGLLV

Query:  SILEVFEELGLNVIEARVSCTHTFQLQAI
        +ILE FEE+GLNV +AR SC  +F ++AI
Subjt:  SILEVFEELGLNVIEARVSCTHTFQLQAI

AT2G40435.1 BEST Arabidopsis thaliana protein match is: transcription regulators (TAIR:AT3G56220.1)1.7e-3259.84Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSRE K+  +L +  QLLRSITNSH+ N  SII+DASKYI++LKQKVER NQD +  Q+S+  +   +PM VTVE + KGF INVFS K+  G+LVS+L
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIG
        E FE++GLNV+EAR SCT +F L A+G
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIG

AT3G56220.1 transcription regulators1.6e-3057.48Show/hide
Query:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL
        MVSREHK+ ++L +   LLRSIT+SH+ ++ SIIVDASKYI++LKQKVE++N + +T + S   S   +PM VTVE + KGF I V S K+  G+LV +L
Subjt:  MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSIL

Query:  EVFEELGLNVIEARVSCTHTFQLQAIG
        E FE+LGL+V+EARVSCT TF L AIG
Subjt:  EVFEELGLNVIEARVSCTHTFQLQAIG

AT5G10570.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.5e-0830Show/hide
Query:  EHKKAAALHDNLQLLRSIT-NSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLS---HQYSPMQVTVERVVKGFSINVFSEKSC---QGLLV
        E ++   L+D L LLRSI      +++ SI+ DA  Y++EL  K+ +L +D   + +++ LS      S ++ +++  V    +N   +  C    GL+V
Subjt:  EHKKAAALHDNLQLLRSIT-NSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLS---HQYSPMQVTVERVVKGFSINVFSEKSC---QGLLV

Query:  SILEVFEELGLNVIEARVSCTHTFQLQA----IGEVRFSI
        S +   E LGL + +  +SC   F LQA    +GE R+ +
Subjt:  SILEVFEELGLNVIEARVSCTHTFQLQA----IGEVRFSI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTAGAGAGCACAAGAAGGCTGCAGCTCTTCATGACAACCTCCAATTACTTCGCTCTATTACCAACTCTCATTCTCTAAACAAGGCGTCGATTATAGTGGATGC
ATCCAAATATATCGAGGAGCTAAAACAAAAAGTAGAAAGATTGAATCAAGATATATCCACTGTTCAAAATTCAAATCCACTTTCTCATCAATATTCTCCCATGCAGGTAA
CAGTGGAAAGGGTAGTAAAGGGATTTTCTATAAATGTATTTTCAGAAAAGAGTTGTCAAGGTCTTCTTGTCTCCATATTAGAAGTGTTTGAAGAGCTTGGACTTAATGTT
ATTGAAGCTAGGGTTTCTTGTACTCATACTTTCCAATTACAAGCTATTGGAGAAGTAAGATTTTCCATACACCCTTCTTTCTATATTTATATATACATTCTTTTAATCTA
TTATTATCATCATTCTAATCATTTCTTTTTATTCATCATTTTAGTTATTTCTCCATTTCACCAATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTAGAGAGCACAAGAAGGCTGCAGCTCTTCATGACAACCTCCAATTACTTCGCTCTATTACCAACTCTCATTCTCTAAACAAGGCGTCGATTATAGTGGATGC
ATCCAAATATATCGAGGAGCTAAAACAAAAAGTAGAAAGATTGAATCAAGATATATCCACTGTTCAAAATTCAAATCCACTTTCTCATCAATATTCTCCCATGCAGGTAA
CAGTGGAAAGGGTAGTAAAGGGATTTTCTATAAATGTATTTTCAGAAAAGAGTTGTCAAGGTCTTCTTGTCTCCATATTAGAAGTGTTTGAAGAGCTTGGACTTAATGTT
ATTGAAGCTAGGGTTTCTTGTACTCATACTTTCCAATTACAAGCTATTGGAGAAGTAAGATTTTCCATACACCCTTCTTTCTATATTTATATATACATTCTTTTAATCTA
TTATTATCATCATTCTAATCATTTCTTTTTATTCATCATTTTAGTTATTTCTCCATTTCACCAATTCTAA
Protein sequenceShow/hide protein sequence
MVSREHKKAAALHDNLQLLRSITNSHSLNKASIIVDASKYIEELKQKVERLNQDISTVQNSNPLSHQYSPMQVTVERVVKGFSINVFSEKSCQGLLVSILEVFEELGLNV
IEARVSCTHTFQLQAIGEVRFSIHPSFYIYIYILLIYYYHHSNHFFLFIILVISPFHQF