; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5805 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5805
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationctg1402:256047..257114
RNA-Seq ExpressionCucsat.G5805
SyntenyCucsat.G5805
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013723.1 hypothetical protein SDJN02_23890, partial [Cucurbita argyrosperma subsp. argyrosperma]3.38e-12171.66Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLV+L+QFEPL+DATSLL Q++K+ADV+FT  ML +I S+ SPRF+ATLQ+S RLFTN+SVDH  SSKVSLE FHDAMLDGGSFSSM+IH+L++  QM+
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LR+E PS + PPLH EL LSPPQAE+LGQVEYG FFTV S+ LR+IIKELPLFH D V V  T ++VKFSI SKEI +TKE G+C+IVGYEGE ET+L +
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP
          RPMMFFLNFTY+AN+VWFYKT TNS SV+S PAFG YGQYV+YFP
Subjt:  VLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP

XP_008458682.1 PREDICTED: uncharacterized protein LOC103498010 [Cucumis melo]2.00e-14698.16Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+F+ATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGSFSSMTIHLLDTTNQMV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANK
        VLRPMMFFLNFTYRANK
Subjt:  VLRPMMFFLNFTYRANK

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]2.37e-10666.4Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++ + AD+KFTP    II S+RSPRFIATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYGN--FFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D++ SV VT S+VKFSI SKEIILT EG HCKI G+E EV
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYGN--FFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV

Query:  ETKLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP
        ET+ Q++L PMMFFLNFTY+AN+VWFYKT  N++++M  PA+G +GQYVIYFP
Subjt:  ETKLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]2.46e-10064.03Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L +FEPL+D+T  LA  +   A VKFTP  L +IVSNR P FIATLQLS R FTNFSVDH  SSKVSLE FHDAMLDGG FS+M+IHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV
        +LRF+TPS  + PLH EL LSPPQ+E+  +GQ E     FF VTS+ LRR+IKELP+F  D++  V VT SQ+KFSI S +I+ + EG HC+I G+E EV
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYG--NFFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV

Query:  ETKLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP
        ET+ Q+ L PM+FFLNFTYRA++VWFYKT  N+++VM  PAFG YGQY IYFP
Subjt:  ETKLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]1.72e-10766.93Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLV+L  FEPL+DATS LAQ++  ADVKFTPL   +I    SPRF+ATLQLS++ FTN+SVDH  +SKV LE FHDA+LDGGSF+SMTIHLL+  NQM+
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQ-AENL--GQVEYGNFFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVET
        LRF+TPS ++PPLHHEL  SPPQ A+N   GQ+E G FF V S  LRRIIKELP+F  D+V  V VT SQ+KFSI SKEI+L  +  HC+IVG+E EVET
Subjt:  LRFETPSHDVPPLHHELALSPPQ-AENL--GQVEYGNFFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVET

Query:  KLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP
        + Q++LRPM+FFLNFTY+ANKVWFYKT  NS+SVM+ PAFG  GQYVIYFP
Subjt:  KLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP

TrEMBL top hitse value%identityAlignment
A0A1S3C8J1 uncharacterized protein LOC1034980109.68e-14798.16Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+F+ATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGSFSSMTIHLLDTTNQMV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANK
        VLRPMMFFLNFTYRANK
Subjt:  VLRPMMFFLNFTYRANK

A0A1S3CL88 uncharacterized protein LOC1035022501.15e-10666.4Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM
        MFLV+L+ F+PL+DATS LAQ++ + AD+KFTP    II S+RSPRFIATLQLS + FT FSVD++ SSKVSLE FHDA+LDGGSF+SMTIHLLD TNQM
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKE-ADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQM

Query:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYGN--FFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV
        +LRF+TPS ++ PLHHEL LSPPQAE+  +GQ E     +F V S+ LRRIIK+LP+F  D++ SV VT S+VKFSI SKEIILT EG HCKI G+E EV
Subjt:  VLRFETPSHDVPPLHHELALSPPQAEN--LGQVEYGN--FFTVTSRELRRIIKELPLFHQDTV-SVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEV

Query:  ETKLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP
        ET+ Q++L PMMFFLNFTY+AN+VWFYKT  N++++M  PA+G +GQYVIYFP
Subjt:  ETKLQVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP

A0A5D3BTK3 Uncharacterized protein9.02e-9685.08Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRLEQFEPLIDATSLLAQVAK+ADVKFTPLMLMIIVSNRSP+F+ATLQLSRRLFTNFSVDHNKSSKVSL+PFHDAMLDGGS                
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
               HDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKE

A0A6J1KIW5 uncharacterized protein LOC1114948749.86e-9356.22Show/hide
Query:  TTMFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQ
        T+MFLVRL+ F PL+D TS LAQ+A+E+D+ FTPL L +  S  SPRFIATLQ+  + FT +SV+ +  S++SLE  HDA+LD GS S+MTIHLL+ TN 
Subjt:  TTMFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQ

Query:  MVLRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKL
        MVLRFETP+H+ P L H+  L PPQ +++ ++EY     + SR+LR++IKELPLFH D+V VTVT S+V+FSI S+E+I  KE G C+I+G++G+  T+ 
Subjt:  MVLRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKL

Query:  QVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP
        ++VL PM+FFLN TY    VWF+KTITN+H VM  P F  + QYVIYFP
Subjt:  QVVLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYFP

A0A6J1KZ05 uncharacterized protein LOC1114988879.35e-8053.25Show/hide
Query:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV
        MFLVRL  F+PL +ATSLLAQ++ EAD+KF+     +I S  S RF+AT Q+S R F N+SVD N SS+VSL+ F+DAM DG  FSSMTIH  +TT++MV
Subjt:  MFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMV

Query:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV
        L+FE+ +H    +H  L LSP Q E LGQ+++  FF++ S++ R II  LP F  +++ V++T S+VKF   S+E ILTKEGG C I+GYEGE E   Q+
Subjt:  LRFETPSHDVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQV

Query:  VLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYF
         L P  FF N +Y A ++WFYKTI +S  V+  PAFG   QYVIYF
Subjt:  VLRPMMFFLNFTYRANKVWFYKTITNSHSVMSTPAFGTYGQYVIYF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCACCATGTTCTTAGTAAGGCTTGAGCAATTTGAACCTCTCATTGATGCAACCTCCTTGTTGGCTCAAGTTGCTAAGGAAGCCGACGTGAAATTCACACCGTTGATGCT
CATGATAATCGTATCGAACCGTTCCCCTCGGTTCATTGCAACGCTGCAGTTGTCGCGACGATTGTTCACCAACTTTTCTGTGGATCATAATAAAAGTTCCAAGGTTTCCC
TTGAACCTTTCCATGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGACTATCCATCTTTTGGATACAACAAACCAAATGGTTCTTAGATTTGAGACTCCAAGTCAT
GATGTGCCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAGAGAGTTAAGAAG
GATCATAAAAGAATTACCTCTCTTCCATCAAGATACTGTTAGTGTTACTGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATTCTTACCAAAGAGG
GTGGGCATTGTAAAATCGTAGGTTATGAAGGAGAAGTTGAAACGAAACTCCAAGTAGTTCTTCGACCGATGATGTTTTTCCTAAATTTTACATATAGAGCCAATAAGGTA
TGGTTTTATAAGACAATAACTAATTCTCATAGTGTAATGAGTACCCCAGCTTTTGGAACTTATGGTCAATATGTCATTTATTTTCCC
mRNA sequenceShow/hide mRNA sequence
ACCACCATGTTCTTAGTAAGGCTTGAGCAATTTGAACCTCTCATTGATGCAACCTCCTTGTTGGCTCAAGTTGCTAAGGAAGCCGACGTGAAATTCACACCGTTGATGCT
CATGATAATCGTATCGAACCGTTCCCCTCGGTTCATTGCAACGCTGCAGTTGTCGCGACGATTGTTCACCAACTTTTCTGTGGATCATAATAAAAGTTCCAAGGTTTCCC
TTGAACCTTTCCATGATGCTATGTTGGATGGTGGAAGTTTTTCTTCAATGACTATCCATCTTTTGGATACAACAAACCAAATGGTTCTTAGATTTGAGACTCCAAGTCAT
GATGTGCCACCATTGCATCATGAATTGGCATTGTCACCTCCCCAAGCAGAGAATTTAGGGCAAGTTGAATATGGAAATTTTTTCACAGTTACTTCTAGAGAGTTAAGAAG
GATCATAAAAGAATTACCTCTCTTCCATCAAGATACTGTTAGTGTTACTGTAACTGGTTCTCAAGTCAAGTTCTCTATTCAATCTAAGGAGATTATTCTTACCAAAGAGG
GTGGGCATTGTAAAATCGTAGGTTATGAAGGAGAAGTTGAAACGAAACTCCAAGTAGTTCTTCGACCGATGATGTTTTTCCTAAATTTTACATATAGAGCCAATAAGGTA
TGGTTTTATAAGACAATAACTAATTCTCATAGTGTAATGAGTACCCCAGCTTTTGGAACTTATGGTCAATATGTCATTTATTTTCCC
Protein sequenceShow/hide protein sequence
TTMFLVRLEQFEPLIDATSLLAQVAKEADVKFTPLMLMIIVSNRSPRFIATLQLSRRLFTNFSVDHNKSSKVSLEPFHDAMLDGGSFSSMTIHLLDTTNQMVLRFETPSH
DVPPLHHELALSPPQAENLGQVEYGNFFTVTSRELRRIIKELPLFHQDTVSVTVTGSQVKFSIQSKEIILTKEGGHCKIVGYEGEVETKLQVVLRPMMFFLNFTYRANKV
WFYKTITNSHSVMSTPAFGTYGQYVIYFP