; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5806 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5806
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationctg1402:257625..259487
RNA-Seq ExpressionCucsat.G5806
SyntenyCucsat.G5806
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.07e-9674.06Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKL  F+PLLD+T FLA  S +NA +KFTP K F+I S+R P FIATLQLSP+WFT FSVD+ HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
        ILRFDTPSS+IQPLH ELTLSPPQ+ED++IGQHEL+ +K+FIV SK+LRR+IK+LPIFQNDSII V VT S++KFSIAS +I+ +EG HC+IEGFEEEVE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE

Query:  TQFQINLCPMLF
        TQFQI LCPM++
Subjt:  TQFQINLCPMLF

TYK02994.1 uncharacterized protein E5676_scaffold46G00830 [Cucumis melo var. makuwa]1.86e-9982.8Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKLTEFEPLLDST +LA YSN+NA +KF PGKLFLIV NR P F ATLQLSPRWF+N+SVDHVHSSKVSLESFHDAMLDGG+FS+MSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSE
         LRFDTPSSQIQP H ELTLSPPQSED +I +HEL+L KF IV SKSLRRVIKELPIF NDSIICV VT SQIKFSIAS  IV SE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSE

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]7.75e-13675.79Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKL  F+PLLD+T FLA  S +NA +KFTP K F+I S+R P FIATLQLSP+WFT FSVD+ HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
        ILRFDTPSS+IQPLH ELTLSPPQ+ED++IGQHEL+ +K+FIV SK+LRR+IK+LPIFQNDSII V VT S++KFSIAS +I+ +EG HC+IEGFEEEVE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE

Query:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFP
        TQFQI LCPM+FFLNFTY+A+RVWFYKTKNNAYT+M+VPA+GI+GQY IYFP
Subjt:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFP

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]7.40e-188100Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
        ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE

Query:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTTYMCMAK
        TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTTYMCMAK
Subjt:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTTYMCMAK

XP_038875055.1 uncharacterized protein LOC120067580 [Benincasa hispida]6.42e-11369.69Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKLT FEPLLD+T +LA  SN  A VKFTP + +LI     P F+ATLQLS + FTN+SVDH H+SKV LESFHDA+LDGG F++M+IHLL+K NQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
        ILRF TPSS+I PLH ELT SPPQ  D+ IG  +L   KFFIV S++LRR+IKELPIFQ+DS++CV VT+SQIKFSIAS +IV  +  HCRI GFEEEVE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE

Query:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT
        TQFQI L PMLFFLNFTY+A++VWFYKTKNN+Y+VM VPAFGI GQY IYFP T
Subjt:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTT

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein1.49e-7975.31Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKLT F+PLLD+T F A  S ++A VKFTP K F+I S+R P FIATLQLSP+WFT+FSVDH HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQ+
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDS
        ILRFDTPSS+IQPLH EL LSPPQ+ED++IGQHEL+  K+FIV SK+LRR+IKELPIFQNDS
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDS

A0A1S3C8J1 uncharacterized protein LOC1034980102.05e-8362.33Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLV+L +FEPL+D+T  LA  + + A VKFTP  L +IVSNR P F+ATLQLS R FTNFSVDH  SSKVSL+ FHDAMLDGG FS+M+IHLLD TNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFS-EGDHCRIEGFEEEV
        +LRF+TPS  + PLH EL LSPPQ+E+  +GQ E     FF VTS+ LRR+IKELP+F  D++  V VT SQ+KFSI S +I+ + EG HC+I G+E EV
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFS-EGDHCRIEGFEEEV

Query:  ETQFQINLCPMLFFLNFTYRASR
        ET+ Q+ L PM+FFLNFTYRA++
Subjt:  ETQFQINLCPMLFFLNFTYRASR

A0A1S3CL88 uncharacterized protein LOC1035022503.75e-13675.79Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKL  F+PLLD+T FLA  S +NA +KFTP K F+I S+R P FIATLQLSP+WFT FSVD+ HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
        ILRFDTPSS+IQPLH ELTLSPPQ+ED++IGQHEL+ +K+FIV SK+LRR+IK+LPIFQNDSII V VT S++KFSIAS +I+ +EG HC+IEGFEEEVE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE

Query:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFP
        TQFQI LCPM+FFLNFTY+A+RVWFYKTKNNAYT+M+VPA+GI+GQY IYFP
Subjt:  TQFQINLCPMLFFLNFTYRASRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFP

A0A5D3BV00 Uncharacterized protein8.98e-10082.8Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKLTEFEPLLDST +LA YSN+NA +KF PGKLFLIV NR P F ATLQLSPRWF+N+SVDHVHSSKVSLESFHDAMLDGG+FS+MSIHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSE
         LRFDTPSSQIQP H ELTLSPPQSED +I +HEL+L KF IV SKSLRRVIKELPIF NDSIICV VT SQIKFSIAS  IV SE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSE

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein5.19e-9774.06Show/hide
Query:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM
        MFLVKL  F+PLLD+T FLA  S +NA +KFTP K F+I S+R P FIATLQLSP+WFT FSVD+ HSSKVSLESFHDA+LDGG F++M+IHLLDKTNQM
Subjt:  MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQM

Query:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE
        ILRFDTPSS+IQPLH ELTLSPPQ+ED++IGQHEL+ +K+FIV SK+LRR+IK+LPIFQNDSII V VT S++KFSIAS +I+ +EG HC+IEGFEEEVE
Subjt:  ILRFDTPSSQIQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVE

Query:  TQFQINLCPMLF
        TQFQI LCPM++
Subjt:  TQFQINLCPMLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAAGCTTACAGAGTTTGAGCCTCTTCTTGACTCAACCTACTTTCTTGCTCTATATTCCAACAACAATGCCCACGTGAAATTCACACCAGGGAAGCTCTT
CTTAATCGTCTCGAACCGTTTCCCGAACTTCATTGCAACGCTACAATTGTCGCCGAGATGGTTCACCAACTTTTCCGTTGATCATGTTCATAGTTCTAAGGTTTCCCTTG
AATCCTTCCATGATGCTATGTTGGATGGTGGAGAATTTTCTACAATGTCAATCCATCTCTTGGACAAAACAAACCAAATGATCCTTAGATTTGATACTCCTTCAAGCCAA
ATCCAACCTTTGCATCGTGAATTGACTTTGTCACCTCCCCAATCAGAAGACGATCGAATTGGCCAACATGAACTTAATCTACAGAAATTTTTCATAGTTACATCTAAGTC
ATTAAGAAGAGTTATAAAAGAGTTACCTATCTTCCAAAATGATTCAATCATTTGTGTTTGTGTAACCGCTTCTCAAATCAAGTTCTCCATTGCATCTCACGATATTGTCT
TCAGTGAGGGTGATCATTGTAGAATCGAAGGTTTTGAAGAAGAAGTTGAAACTCAATTCCAAATCAATCTTTGTCCTATGTTGTTTTTCCTCAATTTTACATATAGAGCA
AGCAGGGTTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATACGCAATCTATTTTCCCACCACTTACATGTG
CATGGCAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAAGCTTACAGAGTTTGAGCCTCTTCTTGACTCAACCTACTTTCTTGCTCTATATTCCAACAACAATGCCCACGTGAAATTCACACCAGGGAAGCTCTT
CTTAATCGTCTCGAACCGTTTCCCGAACTTCATTGCAACGCTACAATTGTCGCCGAGATGGTTCACCAACTTTTCCGTTGATCATGTTCATAGTTCTAAGGTTTCCCTTG
AATCCTTCCATGATGCTATGTTGGATGGTGGAGAATTTTCTACAATGTCAATCCATCTCTTGGACAAAACAAACCAAATGATCCTTAGATTTGATACTCCTTCAAGCCAA
ATCCAACCTTTGCATCGTGAATTGACTTTGTCACCTCCCCAATCAGAAGACGATCGAATTGGCCAACATGAACTTAATCTACAGAAATTTTTCATAGTTACATCTAAGTC
ATTAAGAAGAGTTATAAAAGAGTTACCTATCTTCCAAAATGATTCAATCATTTGTGTTTGTGTAACCGCTTCTCAAATCAAGTTCTCCATTGCATCTCACGATATTGTCT
TCAGTGAGGGTGATCATTGTAGAATCGAAGGTTTTGAAGAAGAAGTTGAAACTCAATTCCAAATCAATCTTTGTCCTATGTTGTTTTTCCTCAATTTTACATATAGAGCA
AGCAGGGTTTGGTTTTATAAGACAAAGAATAATGCTTATACTGTAATGATGGTTCCAGCTTTTGGAATTTATGGTCAATACGCAATCTATTTTCCCACCACTTACATGTG
CATGGCAAAATAG
Protein sequenceShow/hide protein sequence
MFLVKLTEFEPLLDSTYFLALYSNNNAHVKFTPGKLFLIVSNRFPNFIATLQLSPRWFTNFSVDHVHSSKVSLESFHDAMLDGGEFSTMSIHLLDKTNQMILRFDTPSSQ
IQPLHRELTLSPPQSEDDRIGQHELNLQKFFIVTSKSLRRVIKELPIFQNDSIICVCVTASQIKFSIASHDIVFSEGDHCRIEGFEEEVETQFQINLCPMLFFLNFTYRA
SRVWFYKTKNNAYTVMMVPAFGIYGQYAIYFPTTYMCMAK