; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G5897 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G5897
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNucleolar GTP-binding protein 2
Genome locationctg1402:1736468..1738471
RNA-Seq ExpressionCucsat.G5897
SyntenyCucsat.G5897
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005525 - GTP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646583.1 hypothetical protein Csa_005569, partial [Cucumis sativus]1.56e-102100Show/hide
Query:  MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP
        MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP
Subjt:  MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP

Query:  PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAE
        PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAE
Subjt:  PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAE

SBT45457.1 nucleolar GTP-binding protein 2, putative (NOG2) [Plasmodium ovale wallikeri]1.48e-0863.95Show/hide
Query:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED
        E+DND EEDND ++DND EEDN+ ++DND +EDND E+DND  EDND E+DND EEDN+ E+DND ++DND  KDND E+DND E+
Subjt:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED

SBT78842.1 nucleolar GTP-binding protein 2, putative [Plasmodium ovale]1.39e-0863.95Show/hide
Query:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED
        E+DND EEDND ++DND EEDN+ ++DND +EDND E+DND  EDND E+DND EEDN+ E+DND ++DND  KDND E+DND E+
Subjt:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED

XP_031743735.1 protein bfr2-like [Cucumis sativus]5.57e-188100Show/hide
Query:  MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP
        MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP
Subjt:  MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP

Query:  PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKD
        PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKD
Subjt:  PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKD

Query:  NDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRR
        NDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRR
Subjt:  NDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRR

Query:  MMRTIKEIRQL
        MMRTIKEIRQL
Subjt:  MMRTIKEIRQL

XP_042213564.1 protein PFC0760c-like [Homarus americanus]2.56e-1259.46Show/hide
Query:  EDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKD
        +D  +  K + DN + E  EEDN  EKDND EEDND ++DND EEDN+ +KDND +EDN+ EKDN+  E+ND E+DND EEDND E+DND E+DND +KD
Subjt:  EDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKD

Query:  NDTEEDNDTED
        ND EEDND ++
Subjt:  NDTEEDNDTED

TrEMBL top hitse value%identityAlignment
A0A0A0KAJ4 Uncharacterized protein3.71e-12765.85Show/hide
Query:  MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP
        MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP
Subjt:  MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRP

Query:  PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDI-------------------------------------------------
        PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDI                                                 
Subjt:  PRICRSFDPFELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDI-------------------------------------------------

Query:  ---------ANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEED
                      AE+D A+GEKAEEDNATEKDND                                                            AEED
Subjt:  ---------ANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEED

Query:  NDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRRMMRTIKEIRQL
        NDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRRMMRTIKEIRQL
Subjt:  NDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRRMMRTIKEIRQL

A0A1A8ZNR2 Nucleolar GTP-binding protein 27.17e-0963.95Show/hide
Query:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED
        E+DND EEDND ++DND EEDN+ ++DND +EDND E+DND  EDND E+DND EEDN+ E+DND ++DND  KDND E+DND E+
Subjt:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED

A0A1A8ZQ83 Nucleolar GTP-binding protein 27.19e-0963.95Show/hide
Query:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED
        E+DND EEDND ++DND EEDN+ ++DND +EDND E+DND  EDND E+DND EEDN+ E+DND ++DND  KDND E+DND E+
Subjt:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED

A0A1C3KX90 Nucleolar GTP-binding protein 26.75e-0963.95Show/hide
Query:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED
        E+DND EEDND ++DND EEDN+ ++DND +EDND E+DND  EDND E+DND EEDN+ E+DND ++DND  KDND E+DND E+
Subjt:  EKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTED

A0A7H0HBC9 Uncharacterized protein1.25e-0749.12Show/hide
Query:  SDAEEDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDND
        SD + D  N   ++ D  + + A+ DN  + DND + DND   DNDA+ DND   DNDA  DND + DNDA+ DND + DNDA+ DND + DNDA+ DND
Subjt:  SDAEEDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDNDTEKDNDAEEDNDTEKDNDAEEDND

Query:  TDKDNDTEEDNDTE
         D DND + DND +
Subjt:  TDKDNDTEEDNDTE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGTTGCCACTGCCACAGCCGCAAGATTCTCAACCCCAAGCCCCGGTGAAACAACTCCAGCCCCAAGAATTTGATCCACCGCAAGAATCTCAACCCCATGCCCT
GGCCAAACTACTGCAAGAATCTGATCCAGTGGATCCCCCGGAAGAATCTGAGTCTCCTCGTCCTAGAATTGTTGTTCTGAATATGGCCGCGAAGTTAGCGTATAAACTGT
TGGCGAAGTGGTATAAGCAAGCTGGTAAGGTTTCCAATGATGAAAACCACGAAGCAACTGCGGCTAATCATTCTAGACCTCCAAGGATCTGCCGTTCGTTCGATCCATTT
GAGTTAAGTCAGAATGCTGTGAGATATGTGGCTGGCATAAGGCCAACAGAGCGTGAGACTCTTAATGTGACAGACGATTATGTGATTGTGAAGACATATAAGTCTGATGC
AGAGGAAGATATTGCTAATGGTGAAAAGGCTGAGGAAGATAATGCTAATGGTGAAAAGGCTGAGGAAGATAATGCTACTGAGAAAGACAATGATACTGAGGAGGATAACG
ATACTAAGAAAGACAATGATGCTGAGGAGGATAACGATACTAAGAAAGACAATGATGCTAAGGAGGATAACGATACTGAGAAAGACAATGATGCTAATGAGGATAATGAT
ACTGAGAAAGACAATGATGCTGAGGAGGATAACGATACTGAGAAAGACAATGATGCTGAGGAGGATAATGATACTGATAAAGACAATGATACTGAGGAGGATAATGATAC
TGAGGATATACTGAGGAAGATAATGATTATGAGAAAGCTAATGATTCTGACGAATATTATGATACTGAAGAAGATAATGATTTTGAGGAAGATGATGATTACGAGGAGGA
TGATGATTACGAGGAGGAGGATGATGCGCACGATCAAAGAGATTAGACAATTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCGTTGCCACTGCCACAGCCGCAAGATTCTCAACCCCAAGCCCCGGTGAAACAACTCCAGCCCCAAGAATTTGATCCACCGCAAGAATCTCAACCCCATGCCCT
GGCCAAACTACTGCAAGAATCTGATCCAGTGGATCCCCCGGAAGAATCTGAGTCTCCTCGTCCTAGAATTGTTGTTCTGAATATGGCCGCGAAGTTAGCGTATAAACTGT
TGGCGAAGTGGTATAAGCAAGCTGGTAAGGTTTCCAATGATGAAAACCACGAAGCAACTGCGGCTAATCATTCTAGACCTCCAAGGATCTGCCGTTCGTTCGATCCATTT
GAGTTAAGTCAGAATGCTGTGAGATATGTGGCTGGCATAAGGCCAACAGAGCGTGAGACTCTTAATGTGACAGACGATTATGTGATTGTGAAGACATATAAGTCTGATGC
AGAGGAAGATATTGCTAATGGTGAAAAGGCTGAGGAAGATAATGCTAATGGTGAAAAGGCTGAGGAAGATAATGCTACTGAGAAAGACAATGATACTGAGGAGGATAACG
ATACTAAGAAAGACAATGATGCTGAGGAGGATAACGATACTAAGAAAGACAATGATGCTAAGGAGGATAACGATACTGAGAAAGACAATGATGCTAATGAGGATAATGAT
ACTGAGAAAGACAATGATGCTGAGGAGGATAACGATACTGAGAAAGACAATGATGCTGAGGAGGATAATGATACTGATAAAGACAATGATACTGAGGAGGATAATGATAC
TGAGGATATACTGAGGAAGATAATGATTATGAGAAAGCTAATGATTCTGACGAATATTATGATACTGAAGAAGATAATGATTTTGAGGAAGATGATGATTACGAGGAGGA
TGATGATTACGAGGAGGAGGATGATGCGCACGATCAAAGAGATTAGACAATTATGA
Protein sequenceShow/hide protein sequence
MAPLPLPQPQDSQPQAPVKQLQPQEFDPPQESQPHALAKLLQESDPVDPPEESESPRPRIVVLNMAAKLAYKLLAKWYKQAGKVSNDENHEATAANHSRPPRICRSFDPF
ELSQNAVRYVAGIRPTERETLNVTDDYVIVKTYKSDAEEDIANGEKAEEDNANGEKAEEDNATEKDNDTEEDNDTKKDNDAEEDNDTKKDNDAKEDNDTEKDNDANEDND
TEKDNDAEEDNDTEKDNDAEEDNDTDKDNDTEEDNDTEDILRKIMIMRKLMILTNIMILKKIMILRKMMITRRMMITRRRMMRTIKEIRQL