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Cucsat.G591 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G591
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein CHUP1, chloroplastic
Genome locationctg1:11506533..11509817
RNA-Seq ExpressionCucsat.G591
SyntenyCucsat.G591
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:0009707 - chloroplast outer membrane (cellular component)
InterPro domainsIPR040265 - Protein CHUP1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052149.1 protein CHUP1 [Cucumis melo var. makuwa]4.02e-6697.27Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPR+M+GRSHA
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGIQSS
Subjt:  QGLIVGIQSS

KAG6597596.1 Protein CHUP1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.95e-5787.39Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGI SKIKQASMNLAKMYMKRVKTEL+S+RSSDKESN ESLLLQG+HF YRTHQFAGGLDSETLCAFEEIKQWVPR++VG SH+
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  Q-GLIVGIQSS
        Q G IVGI SS
Subjt:  Q-GLIVGIQSS

XP_004147632.1 protein CHUP1, chloroplastic [Cucumis sativus]6.72e-68100Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGIQSS
Subjt:  QGLIVGIQSS

XP_008439003.1 PREDICTED: protein CHUP1, chloroplastic [Cucumis melo]4.02e-6697.27Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPR+M+GRSHA
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGIQSS
Subjt:  QGLIVGIQSS

XP_038902728.1 protein CHUP1, chloroplastic [Benincasa hispida]7.31e-6392.73Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDS+RSSDKESN ESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPR+++GRSH+
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGI SS
Subjt:  QGLIVGIQSS

TrEMBL top hitse value%identityAlignment
A0A0A0L5G9 Uncharacterized protein3.26e-68100Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGIQSS
Subjt:  QGLIVGIQSS

A0A1S4DT91 protein CHUP1, chloroplastic1.94e-6697.27Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPR+M+GRSHA
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGIQSS
Subjt:  QGLIVGIQSS

A0A5D3C1G2 Protein CHUP11.94e-6697.27Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPR+M+GRSHA
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  QGLIVGIQSS
        QGLIVGIQSS
Subjt:  QGLIVGIQSS

A0A6J1G7Z6 protein CHUP1, chloroplastic1.26e-5787.39Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGI SKIKQASMNLAKMYMKRVKTEL+S+RSSDKESN ESLLLQG+HF YRTHQFAGGLDSETLCAFEEIKQWVPR++VG SH+
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  Q-GLIVGIQSS
        Q G IVGI SS
Subjt:  Q-GLIVGIQSS

A0A6J1I5F5 protein CHUP1, chloroplastic1.14e-5787.39Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA
        MHSYQ+LKLPTNWMLDSGI SKIKQASMNLAKMYMKRVKTEL+S+RSSDKESN ESLLLQG+HF YRTHQFAGGLDSETLCAFEEIKQWVPR++VG SH+
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHA

Query:  Q-GLIVGIQSS
        Q G IVGI SS
Subjt:  Q-GLIVGIQSS

SwissProt top hitse value%identityAlignment
Q9LI74 Protein CHUP1, chloroplastic1.1e-2155.95Show/hide
Query:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK
        Y+   +P +W+ D+G++ KIK +S+ LAK YMKRV  ELDSV  SDK+ N E LLLQG+ FA+R HQFAGG D+E++ AFEE++
Subjt:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK

Arabidopsis top hitse value%identityAlignment
AT1G48280.1 hydroxyproline-rich glycoprotein family protein1.3e-3065.96Show/hide
Query:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRM
        M SYQ+ K+P  WMLDSG++ KIK+AS+ LAK YM RV  EL S R+ D+ES  E+LLLQG+ FAYRTHQFAGGLD ETLCA EEIKQ VP  +
Subjt:  MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRM

AT3G25690.1 Hydroxyproline-rich glycoprotein family protein7.9e-2355.95Show/hide
Query:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK
        Y+   +P +W+ D+G++ KIK +S+ LAK YMKRV  ELDSV  SDK+ N E LLLQG+ FA+R HQFAGG D+E++ AFEE++
Subjt:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK

AT3G25690.2 Hydroxyproline-rich glycoprotein family protein7.9e-2355.95Show/hide
Query:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK
        Y+   +P +W+ D+G++ KIK +S+ LAK YMKRV  ELDSV  SDK+ N E LLLQG+ FA+R HQFAGG D+E++ AFEE++
Subjt:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK

AT3G25690.3 Hydroxyproline-rich glycoprotein family protein7.9e-2355.95Show/hide
Query:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK
        Y+   +P +W+ D+G++ KIK +S+ LAK YMKRV  ELDSV  SDK+ N E LLLQG+ FA+R HQFAGG D+E++ AFEE++
Subjt:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK

AT4G18570.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.9e-1948.81Show/hide
Query:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK
        +++ ++P +WML++GI S+IK AS+ LA  YMKRV  EL+++     E   E L++QG+ FA+R HQFAGG D+ET+ AFEE++
Subjt:  YQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTCTTATCAAAACCTGAAACTCCCAACAAATTGGATGCTAGACTCCGGTATCATGAGTAAGATAAAGCAAGCTTCTATGAATCTTGCCAAGATGTACATGAAAAG
GGTGAAAACGGAGCTGGATTCAGTTCGTAGTTCAGATAAAGAATCCAACCATGAATCTCTATTACTTCAGGGAATTCATTTTGCATACAGAACTCACCAGTTTGCTGGAG
GGCTTGATTCGGAAACATTGTGTGCTTTTGAGGAAATAAAACAATGGGTTCCAAGACGAATGGTTGGAAGATCCCATGCTCAAGGGTTGATAGTTGGCATACAATCATCA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGCATTCTTATCAAAACCTGAAACTCCCAACAAATTGGATGCTAGACTCCGGTATCATGAGTAAGATAAAGCAAGCTTCTATGAATCTTGCCAAGATGTACATGAAAAG
GGTGAAAACGGAGCTGGATTCAGTTCGTAGTTCAGATAAAGAATCCAACCATGAATCTCTATTACTTCAGGGAATTCATTTTGCATACAGAACTCACCAGTTTGCTGGAG
GGCTTGATTCGGAAACATTGTGTGCTTTTGAGGAAATAAAACAATGGGTTCCAAGACGAATGGTTGGAAGATCCCATGCTCAAGGGTTGATAGTTGGCATACAATCATCA
TAA
Protein sequenceShow/hide protein sequence
MHSYQNLKLPTNWMLDSGIMSKIKQASMNLAKMYMKRVKTELDSVRSSDKESNHESLLLQGIHFAYRTHQFAGGLDSETLCAFEEIKQWVPRRMVGRSHAQGLIVGIQSS