; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6046 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6046
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationctg1425:1412034..1413999
RNA-Seq ExpressionCucsat.G6046
SyntenyCucsat.G6046
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140973.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis sativus]1.61e-184100Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_008441527.1 PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic [Cucumis melo]8.96e-18297.65Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRGSSRTRTLLAGARG VNVVSSSKLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_022993917.1 chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucurbita maxima]9.63e-17794.9Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRG SRT+TLLAGARG VNVV S KLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_031736148.1 LOW QUALITY PROTEIN: chlorophyll a-b binding protein CP24 10A, chloroplastic-like [Cucumis sativus]8.96e-18298.82Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGW ESKRWVDFF PESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGK PLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

XP_038885126.1 chlorophyll a-b binding protein CP24 10A, chloroplastic [Benincasa hispida]4.77e-17794.9Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRG SRT+TLLAG RG VNVVSS KLV+VAAAQPKKSWLP V+GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYI DTEKLERLKLAEIKHARIAMLAML FYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

TrEMBL top hitse value%identityAlignment
A0A0A0KEF5 Chlorophyll a-b binding protein, chloroplastic7.81e-185100Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A1S3B4E4 Chlorophyll a-b binding protein, chloroplastic4.34e-18297.65Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRGSSRTRTLLAGARG VNVVSSSKLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A5D3DGI0 Chlorophyll a-b binding protein, chloroplastic4.34e-18297.65Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRGSSRTRTLLAGARG VNVVSSSKLV++AAAQPKKSW+PGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JEC2 Chlorophyll a-b binding protein, chloroplastic5.44e-17694.12Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGA+L GLGSPFL G SRT+TLLAGARG VNVVSS KLVIVAAAQPKKSW+P V+GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIF+GQAWSGIPWFEAGADP AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGTLKDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

A0A6J1JU87 Chlorophyll a-b binding protein, chloroplastic4.66e-17794.9Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        MAATSGAVL GLGSPFLRG SRT+TLLAGARG VNVV S KLVIVAAAQPKKSW+P V+GGGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        GFAGT+KDGVYI DTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALG+
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

SwissProt top hitse value%identityAlignment
P13869 Chlorophyll a-b binding protein, chloroplastic1.0e-3035.66Show/hide
Query:  SGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGR
        +G+++    + FL G     +      GS +V  S+    VAA   +  W PG         PEWLDGSLPGD+GFDPLGLG DP  LKW  +AEL+H R
Subjt:  SGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGR

Query:  WAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        WAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P   + +   P      N    T + GYPGG +FD
Subjt:  WAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFE
        PLG+              K++ L+  EIK+ R+AMLA++  +F+
Subjt:  PLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFE

P27524 Chlorophyll a-b binding protein CP24 10A, chloroplastic4.1e-12081.64Show/hide
Query:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGS-VNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        MA TS AVL GL S FL G ++++ LLA    + V   ++ K   V AA  KKSW+P VRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
Subjt:  MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGS-VNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP
        LIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFG+LLGTQL+LMGWVESKRWVDFF+P+SQSVEWATPWS+TAENFAN TGEQGYPGGKFFDP
Subjt:  LIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDP

Query:  LGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        L  AGTL +GVY+ DTEKLERLK+AEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  LGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P27525 Chlorophyll a-b binding protein CP24 10B, chloroplastic1.1e-11780.54Show/hide
Query:  MAATSG-AVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAA-QPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA
        M  TS  AVL GL S FL G  +T+ LL GA  +  V +  + V+ AAA  PKKSW+P V+ GGNLVDPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREA
Subjt:  MAATSG-AVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAA-QPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREA

Query:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD
        ELIHGRWAMAAV+GIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFF+ +SQS++WATPWS+TAENFAN TGEQGYPGGKFFD
Subjt:  ELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFD

Query:  PLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        PL  AGTL +GVY+ DTEKLERLKLAEIKH+R+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  PLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

P36494 Chlorophyll a-b binding protein CP24, chloroplastic8.1e-11678.38Show/hide
Query:  AATSG-AVLTGLGSPFLRGSSRTRTLLAGARGSVNV---VSSSKLVIV-AAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR
        AATS  A++ G  SPFL G  ++   L      V      +S KLV+V AAA PKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYR
Subjt:  AATSG-AVLTGLGSPFLRGSSRTRTLLAGARGSVNV---VSSSKLVIV-AAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYR

Query:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF
        EAELIHGRWAM AV+GIFVGQAW+GIPWFEAGADPGA+APFSFG+LLGTQLLLMGWVESKRWVDFF+P+SQSVEWATPWSRTAENF+N+TGEQGYPGGKF
Subjt:  EAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKF

Query:  FDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        FDPL  AGT+ +GVY  DT+KLERLKLAEIKHAR+AMLAMLIFYFEAGQGKTPLGALGL
Subjt:  FDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

Q9C639 Photosystem I chlorophyll a/b-binding protein 5, chloroplastic3.6e-3143.41Show/hide
Query:  AQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS
        A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W+EAGA       F F S
Subjt:  AQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS

Query:  ---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLI
           L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML 
Subjt:  ---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLI

Query:  FYFEA
        F+ +A
Subjt:  FYFEA

Arabidopsis top hitse value%identityAlignment
AT1G15820.1 light harvesting complex photosystem II subunit 64.0e-11880Show/hide
Query:  ATSGAVLTGLGSPFLRGSSRTRTLLAG--ARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL
        A SGAVL+GLGS FL G  R  T LA     G+  V   + +V  AAAQPKKSW+P V+GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAEL
Subjt:  ATSGAVLTGLGSPFLRGSSRTRTLLAG--ARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAEL

Query:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL
        IHGRWAMAAV+GIFVGQAWSG+ WFEAGA P AIAPFSFGSLLGTQLLLMGWVESKRWVDFFNP+SQSVEWATPWS+TAENFAN TG+QGYPGG+FFDPL
Subjt:  IHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPL

Query:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL
        G AG  +DGVY  D EKLERLKLAEIKH+R+AM+AMLIFYFEAGQGKTPLGALGL
Subjt:  GFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL

AT1G19150.1 photosystem I light harvesting complex gene 62.2e-3135.38Show/hide
Query:  MAATSGAVLTG---LGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLG
        MA    + LT    L +  ++  ++ R  +A    +   +   +LV+V A +   S           W PG         PEWLDGSLPGD+GFDPLGLG
Subjt:  MAATSGAVLTG---LGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKS-----------WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLG

Query:  KDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA
         DP  LKW+ +AELIH RWAM AV GI + +    + + E  +  D G+   F+   +L   Q++LMGW E +RW D   P S  +E   P      +  
Subjt:  KDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFE--AGADPGAIAPFSFG-SLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFA

Query:  NATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEA
        N   + GYPGG +FD + +     + V +        L+  EIK+ R+AMLA L F F+A
Subjt:  NATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFEA

AT1G45474.1 photosystem I light harvesting complex gene 52.6e-3243.41Show/hide
Query:  AQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS
        A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W+EAGA       F F S
Subjt:  AQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS

Query:  ---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLI
           L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML 
Subjt:  ---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLI

Query:  FYFEA
        F+ +A
Subjt:  FYFEA

AT1G45474.2 photosystem I light harvesting complex gene 52.6e-3243.41Show/hide
Query:  AQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS
        A  + +WLPG      L  P +LDG+L GDYGFDPLGLG+DP  LKWY +AEL+H R+AM  V GI        +GI     W+EAGA       F F S
Subjt:  AQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGI----PWFEAGADPGAIAPFSFGS

Query:  ---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLI
           L+  Q LLMG+ E+KR++DF +P SQ+ E +  +   A   A    E GYPGG   +PLG A          D +     KL EIK+ R+AM+AML 
Subjt:  ---LLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLI

Query:  FYFEA
        F+ +A
Subjt:  FYFEA

AT3G61470.1 photosystem I light harvesting complex gene 28.2e-3134.94Show/hide
Query:  SGAVLTGLGSPFLRGSSRTR-----TLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE
        + + +  + SP   G  + R     T+ A +R   +V +      VAA   +  W PG         PEWLDGSLPGD+GFDPLGL  DP  LKW  +AE
Subjt:  SGAVLTGLGSPFLRGSSRTR-----TLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAE

Query:  LIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG
        ++H RWAM    GIF+ +  + I       W+ AG            +L   +L+L+GW E +RW D   P S + +   P      N    T + GYPG
Subjt:  LIHGRWAMAAVVGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPG

Query:  GKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFE
        G +FDPLG+              KL+ L+  EIK+ R+AMLA++  +F+
Subjt:  GKFFDPLGFAGTLKDGVYIADTEKLERLKLAEIKHARIAMLAMLIFYFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTACTGGATTGGGCTCACCCTTCCTCCGTGGAAGTAGCAGAACTCGGACCTTGCTGGCCGGAGCTAGAGGTAGTGTCAATGTTGT
CAGCTCTAGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCTAAGAAGTCTTGGCTCCCTGGTGTTAGGGGTGGTGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCAC
TTCCAGGTGACTACGGCTTCGACCCATTGGGTTTGGGGAAGGACCCTGCATTTTTGAAGTGGTATAGAGAAGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTG
GTCGGAATCTTCGTCGGACAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTAGGAACCCAGCT
TCTGCTAATGGGATGGGTTGAAAGCAAACGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCTACACCATGGTCGAGGACGGCAGAGAATTTCGCAA
ACGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTTAAAGATGGGGTTTACATTGCAGACACGGAGAAATTGGAGAGA
TTGAAGTTGGCAGAAATCAAGCATGCTAGGATCGCCATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAAACACCATTGGGTGCTCTTGGATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCAACTTCTGGTGCTGTGCTTACTGGATTGGGCTCACCCTTCCTCCGTGGAAGTAGCAGAACTCGGACCTTGCTGGCCGGAGCTAGAGGTAGTGTCAATGTTGT
CAGCTCTAGCAAGCTTGTCATCGTCGCTGCTGCTCAGCCTAAGAAGTCTTGGCTCCCTGGTGTTAGGGGTGGTGGCAACTTGGTCGACCCAGAATGGCTTGATGGCTCAC
TTCCAGGTGACTACGGCTTCGACCCATTGGGTTTGGGGAAGGACCCTGCATTTTTGAAGTGGTATAGAGAAGCAGAGCTGATCCACGGGCGGTGGGCAATGGCAGCAGTG
GTCGGAATCTTCGTCGGACAAGCCTGGAGTGGAATCCCATGGTTCGAAGCCGGAGCAGATCCAGGCGCAATTGCTCCATTCTCCTTCGGATCACTTCTAGGAACCCAGCT
TCTGCTAATGGGATGGGTTGAAAGCAAACGATGGGTGGATTTCTTCAACCCAGAATCTCAATCGGTGGAATGGGCTACACCATGGTCGAGGACGGCAGAGAATTTCGCAA
ACGCAACCGGAGAACAAGGGTATCCCGGAGGAAAATTCTTCGATCCATTGGGATTTGCAGGAACTCTTAAAGATGGGGTTTACATTGCAGACACGGAGAAATTGGAGAGA
TTGAAGTTGGCAGAAATCAAGCATGCTAGGATCGCCATGTTAGCAATGCTCATCTTCTACTTTGAAGCTGGACAGGGGAAAACACCATTGGGTGCTCTTGGATTGTAA
Protein sequenceShow/hide protein sequence
MAATSGAVLTGLGSPFLRGSSRTRTLLAGARGSVNVVSSSKLVIVAAAQPKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV
VGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIADTEKLER
LKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL