; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6067 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6067
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosomal RNA adenine dimethylase family protein
Genome locationctg1425:1882140..1886869
RNA-Seq ExpressionCucsat.G6067
SyntenyCucsat.G6067
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574778.1 hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia]7.03e-9081.77Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV
        ME MA+G A PSL DL+LSL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST H PQSLPLP    PPSIN+  LSSATSAAF     +PMQV
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV

Query:  GDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        GDD+DADA QNSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  GDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

XP_008460165.1 PREDICTED: uncharacterized protein LOC103499058 [Cucumis melo]1.88e-10996.02Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
        ME MA+GTAPPSLSDLL SLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLP    PPSINETSLSSATSAAFDPMQVGDDDD
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD

Query:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
Subjt:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

XP_011656677.1 uncharacterized protein LOC105435764 [Cucumis sativus]5.18e-117100Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
        MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD

Query:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
Subjt:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

XP_023548054.1 uncharacterized protein LOC111806806 [Cucurbita pepo subsp. pepo]3.12e-8779.46Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV
        ME MA+G A PSL DL+LSL+QA+FMAKQL STSNP HLLQIYNSLHQANLNLS+FLST H PQSLP+P    PPSIN+  LSSATSAAF     +PMQV
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV

Query:  GDDDDADA----HQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        GDD+DADA     QNSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAAMAEERRVH  NRF+AT KGFDPHVERLRALDLISQFHA
Subjt:  GDDDDADA----HQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

XP_038876419.1 uncharacterized protein LOC120068853 [Benincasa hispida]5.84e-9185.08Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV
        MEAMA+G A PSLSDLLLSL+QA+FMAKQLPS+SNPTHLLQIYNSLHQANLNLSLFLS T   QSLPLP P    SINE SLSSATSAAF     +PMQV
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV

Query:  GDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        GDDDDADA  +SKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVH  NRFTATPKGFDPHVERLRALDLISQFHA
Subjt:  GDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

TrEMBL top hitse value%identityAlignment
A0A0A0KBH1 Uncharacterized protein2.51e-117100Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
        MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD

Query:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
Subjt:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

A0A1S3CC06 uncharacterized protein LOC1034990589.10e-11096.02Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
        ME MA+GTAPPSLSDLL SLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLP    PPSINETSLSSATSAAFDPMQVGDDDD
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD

Query:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
Subjt:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

A0A5D3DLF5 Putative AP2-like ethylene-responsive transcription factor SNZ9.10e-11096.02Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD
        ME MA+GTAPPSLSDLL SLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLP    PPSINETSLSSATSAAFDPMQVGDDDD
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDD

Query:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
Subjt:  ADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

A0A6J1DSG3 uncharacterized protein LOC1110230952.52e-7977.35Show/hide
Query:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV
        MEAMA+G A PSL DL+LSL+QA+FMAKQLPSTSNP+HLLQIYNSLHQAN NLS+FLS T  PQSLPLP P    S+NE SLSSATSAAF     +PMQV
Subjt:  MEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAF-----DPMQV

Query:  GDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
        GDD+     QNSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AAMAEERR+H  +RF AT KGFDP VERLRALDLISQFHA
Subjt:  GDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA

A0A7N2MFF3 Uncharacterized protein4.95e-5561.33Show/hide
Query:  MEAMADGTA--PPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLP--LP-PPSINETSLSSATSAA-FDPMQ
        ME MA+  A  P  L +L+L+L+QAT MAKQLP+T++PTHLLQIY SLHQA+ +LS FLS TH  Q  P PLP  LP P + +E S+SS T  A  DPMQ
Subjt:  MEAMADGTA--PPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLP--LP-PPSINETSLSSATSAA-FDPMQ

Query:  VGDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFH
        + DDD  D   NSKG IE VEEKM+DCFIKNKR KR LSPSAA MAEERR++    F  + KGFDP+  RLRALDL+ QFH
Subjt:  VGDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01840.1 unknown protein1.7e-1840.59Show/hide
Query:  LSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDDAD---AHQNSKG
        +++L+ SL+QAT MA+Q+ +T     LLQI +SL  A+  LS FL++              P +  E S SS      +PMQ+G+++  +   A +    
Subjt:  LSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSSATSAAFDPMQVGDDDDAD---AHQNSKG

Query:  TIEMVEEKMKDCFIKNKRVKRQLSPSAAAM---AEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA
         IE VEEKM++CFI+NKR+KR LSPS+A +   A E R      F +     DPH  +LRALDLI QFHA
Subjt:  TIEMVEEKMKDCFIKNKRVKRQLSPSAAAM---AEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAATATTCATTACTCATCTTCTACCTGCCTTTCCTTCTGCAATTCATTGCCCATTAATAAATAGTGGAAGGAGAAAGATGGAGGCCATGGCAGACGGAACAGCACCACC
TTCATTGTCCGATCTTTTACTATCTCTAGACCAAGCAACCTTCATGGCTAAGCAGCTTCCTTCTACCTCTAATCCAACCCATCTCCTCCAAATCTATAATTCTCTTCACC
AAGCAAACCTCAACCTCTCCCTCTTCCTTTCTACAACTCACCTTCCCCAATCTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTTCCATCAACGAAACTTCCCTCTCCTCC
GCAACCAGCGCCGCCTTCGACCCGATGCAGGTCGGCGACGACGATGATGCCGACGCCCACCAGAATTCCAAGGGTACGATTGAAATGGTTGAGGAGAAGATGAAGGATTG
TTTTATTAAGAACAAGCGGGTTAAGCGTCAGCTATCTCCCTCCGCAGCGGCTATGGCCGAGGAAAGACGAGTGCATCCTCATAATCGCTTTACTGCCACGCCCAAGGGTT
TCGATCCTCATGTAGAGAGATTGCGGGCCTTGGACCTTATTTCCCAGTTTCATGCGTGA
mRNA sequenceShow/hide mRNA sequence
TTAATATTCATTACTCATCTTCTACCTGCCTTTCCTTCTGCAATTCATTGCCCATTAATAAATAGTGGAAGGAGAAAGATGGAGGCCATGGCAGACGGAACAGCACCACC
TTCATTGTCCGATCTTTTACTATCTCTAGACCAAGCAACCTTCATGGCTAAGCAGCTTCCTTCTACCTCTAATCCAACCCATCTCCTCCAAATCTATAATTCTCTTCACC
AAGCAAACCTCAACCTCTCCCTCTTCCTTTCTACAACTCACCTTCCCCAATCTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTTCCATCAACGAAACTTCCCTCTCCTCC
GCAACCAGCGCCGCCTTCGACCCGATGCAGGTCGGCGACGACGATGATGCCGACGCCCACCAGAATTCCAAGGGTACGATTGAAATGGTTGAGGAGAAGATGAAGGATTG
TTTTATTAAGAACAAGCGGGTTAAGCGTCAGCTATCTCCCTCCGCAGCGGCTATGGCCGAGGAAAGACGAGTGCATCCTCATAATCGCTTTACTGCCACGCCCAAGGGTT
TCGATCCTCATGTAGAGAGATTGCGGGCCTTGGACCTTATTTCCCAGTTTCATGCGTGA
Protein sequenceShow/hide protein sequence
LIFITHLLPAFPSAIHCPLINSGRRKMEAMADGTAPPSLSDLLLSLDQATFMAKQLPSTSNPTHLLQIYNSLHQANLNLSLFLSTTHLPQSLPLPLPLPPPSINETSLSS
ATSAAFDPMQVGDDDDADAHQNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAMAEERRVHPHNRFTATPKGFDPHVERLRALDLISQFHA