| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039984.1 RNA polymerase sigma factor sigB isoform X1 [Cucumis melo var. makuwa] | 0.0 | 97.45 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D+EPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
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| XP_004154029.1 RNA polymerase sigma factor sigB [Cucumis sativus] | 0.0 | 100 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| XP_008460092.1 PREDICTED: RNA polymerase sigma factor sigB isoform X1 [Cucumis melo] | 0.0 | 97.07 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| XP_008460093.1 PREDICTED: RNA polymerase sigma factor sigB isoform X2 [Cucumis melo] | 0.0 | 94.14 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYT SPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| XP_038875580.1 RNA polymerase sigma factor sigB isoform X1 [Benincasa hispida] | 0.0 | 94.32 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYS-HHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVE
MSCLLPQFKCHPETFSIQFKTAANY+ HHH+FLPTA SSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRL LPPFDTNTDSVSVERLRSYLGAVE
Subjt: MSCLLPQFKCHPETFSIQFKTAANYS-HHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVE
Query: SSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTES
SSLASTLLTSEEA+IAAAAAEAV LAKAAVKVARDAALLANN NSSRAG KS+SSP+PDALHFKWAQFMESERADIIGEPVGVN RPME DAL+PSTT+S
Subjt: SSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTES
Query: DDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLL
DDMEPTSEELELLQDELSESITV+SKRQTERKARRTRAAEKT TSV+S KSGSSSRKKRNS+QEVDYSDPLRYLRATT+TSRLLTA EELELSEGIQDLL
Subjt: DDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLL
Query: KLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
KLERLQEEL +RYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Subjt: KLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAH
Query: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCE
WWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET E
Subjt: WWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCE
Query: DMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
DMLIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY++S
Subjt: DMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0K917 RNA polymerase sigma factor | 0.0 | 100 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| A0A1S3CBA5 RNA polymerase sigma factor | 0.0 | 94.14 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYT SPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| A0A1S3CD00 RNA polymerase sigma factor | 0.0 | 97.07 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSF+PTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D+EPTS+ELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| A0A5A7T955 RNA polymerase sigma factor | 0.0 | 97.45 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
MSCLLPQFKCHPETFSIQFKTAAN SHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTL+VDRLKLPPFDTNTDSVSVERLRSYLGAVES
Subjt: MSCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGAVES
Query: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
SLASTLLTSEEA+IAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQ SPKPDALHFKWAQFMESERADIIGEPVGVNKRP+EGDALEPSTTESD
Subjt: SLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALEPSTTESD
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D+EPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSV+ FKSGSSSRKKR+S+QEVDYSDPLRYLRATT+TSRLLTATEELELSEGIQDLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
LERLQEEL ERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Subjt: LERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHW
Query: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLL ENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAET ED
Subjt: WIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCED
Query: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
Subjt: MLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMG
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| A0A6J1DSR7 RNA polymerase sigma factor | 0.0 | 88.76 | Show/hide |
Query: MSCLLPQFKCHPETFSIQFKTAA-------NYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRS
MSCLLPQFKCHPETFSIQFKT A NYSHHH+FLPTA SS TKVRDPHSLRTQCILSAASP TSTGTATT +V+RLKLPP D NTDS+S ERLRS
Subjt: MSCLLPQFKCHPETFSIQFKTAA-------NYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRS
Query: YLGAVESSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALE
YL AVESS ASTLLTSEEA+IAAAAAEAVTLAKAAVKVA+DAALL NN NSS+ G KSQSS K DALHFKW QFMESERADIIG PVGVN RP EGDAL+
Subjt: YLGAVESSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDALE
Query: PSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSE
T ESD +PT+EELELLQDELS +I V+S+RQTER+A+RTRAAEK TSV+S KSGSSSRKKRNSVQEVDYSDPLRYLRATT+ SRLLTATEELELSE
Subjt: PSTTESDDMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSE
Query: GIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
GIQDLLKLERLQEEL ERYG EPTFAQWAAAAGVNQRTLRKRLNYGT CKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Subjt: GIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFK
Query: FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
FSTYAHWWIKQAVRK LSDQSRTIRLPFHMVEATYRVKEARKQL ENGRHPDD+EIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Subjt: FSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDP
Query: EAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
EAET ED+LIKQFMKQDLEKVLDSLNPRE+QVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY+MS
Subjt: EAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 9.2e-184 | 63.01 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T + LDV +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L N+ N++ T S + + KW QF E ERA I+G + V+ + D +
Subjt: -----VESSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
Query: EPSTTESD---DME-PTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEE
S + + D+E EE+ELL+++ S S+ V+S RQTERKARR + EKT + + S K+GSS +KKR QEVD++DPLRYLR TT++S+LLT EE
Subjt: EPSTTESD---DME-PTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEE
Query: LELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Subjt: LELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Query: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
+KGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATYRVKEARKQL E G+HP ++EIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKPSE
Subjt: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
Query: VISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
VI+DPEA T ED+LIK+FM+QDL+KVLDSL REKQVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQY+++
Subjt: VISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| P26683 RNA polymerase sigma factor SigA | 4.9e-76 | 45.78 | Show/hide |
Query: KSGSSSRKKRNSVQEVDY--SDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
KSG +++ +R + + + D +R RLL A EE+EL+ I DLL+LER++E L E+ +P ++WA A + R RL+ G KDKM
Subjt: KSGSSSRKKRNSVQEVDY--SDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKM
Query: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPD
++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E GR P
Subjt: IKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPD
Query: DKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEI
++EIA +++++L + + + P SLE IG ++ + + I + + ET ED + K +++DLEKVLDSL+PRE+ V+R R+G++DGRMKTL+EIG+I
Subjt: DKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEI
Query: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYV
V+RERIRQIE+ A RKL++ R L++Y+
Subjt: MGVSRERIRQIESCAFRKLKNKKRTKHLQQYV
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| P38023 RNA polymerase sigma factor SigA1 | 1.2e-71 | 41.71 | Show/hide |
Query: SEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSF-------------KSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELS
++ ELL L + T K+KR + +KA T A + T++ + ++ K + V++ D +R RLL A EE+EL+
Subjt: SEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSF-------------KSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELS
Query: EGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
I DLL LER+++EL E+ P+ A+WAAA R+RL G KDKM++SN+RLV+SIAK Y G++ QDL+QEG GL+R AEKFD KG+
Subjt: EGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGF
Query: KFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E GR P ++EIA +++++L + + + P SLE IG ++ + + I +
Subjt: KFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISD
Query: PEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV
+ ET ED + K +++DLE VL +L+PRE+ V+R R+G++DGRMKTL+EIG++ V+RERIRQIE+ A RKL++ R L++Y+
Subjt: PEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV
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| P52322 RNA polymerase sigma factor SigA | 2.3e-65 | 37.65 | Show/hide |
Query: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
D + E++EL +E S+S K R+ RR A +K T D +R RLL A EE+EL+ I DLLK
Subjt: DMEPTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLK
Query: LERLQEE---------------------------------------LGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNY
LER++E+ LG+ P +W A + ++RL +G K+KM++SN+RLV+SIAK Y
Subjt: LERLQEE---------------------------------------LGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNY
Query: QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRL
G++ QDL+QEG GL+R AEKFD KG+KFSTYA WWI+QA+ + ++DQSRTIRLP H+ E R+K+ K L E R P ++EIA +++++L
Subjt: QGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRL
Query: AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
+ + + P SLE IG ++ + + I + + ET ED + K +++DLE VLD+L+PRE+ V+R R+G++DGRMKTL+EIG+I V+RERIRQIE+ A
Subjt: AAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA
Query: FRKLKNKKRTKHLQQYV
RKL++ R L++Y+
Subjt: FRKLKNKKRTKHLQQYV
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| Q9LD95 RNA polymerase sigma factor sigF, chloroplastic | 1.6e-63 | 39.04 | Show/hide |
Query: VKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW
V+SKRQ ER+A+ RA + + +S KK+ Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT +W
Subjt: VKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RK + SRTIRLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPR
++ +V EARK + E P +E+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Subjt: HMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPR
Query: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
E+++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 6.6e-185 | 63.01 | Show/hide |
Query: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGA----
SCLLPQFKC P++FSI F+T SF ++ + P QC +S SP T + LDV +L+LP FDT++DS+ +R +Y
Subjt: SCLLPQFKCHPETFSIQFKTAANYSHHHSFLPTAYSSYTKVRDPHSLRTQCILSAASPPTSTGTATTLDVDRLKLPPFDTNTDSVSVERLRSYLGA----
Query: -----VESSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
+E+ + TLLTS+EA + AAAAEAV LA+AAVKVA+DA L N+ N++ T S + + KW QF E ERA I+G + V+ + D +
Subjt: -----VESSLASTLLTSEEASIAAAAAEAVTLAKAAVKVARDAALLANNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGEPVGVNKRPMEGDAL
Query: EPSTTESD---DME-PTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEE
S + + D+E EE+ELL+++ S S+ V+S RQTERKARR + EKT + + S K+GSS +KKR QEVD++DPLRYLR TT++S+LLT EE
Subjt: EPSTTESD---DME-PTSEELELLQDELSESITVKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEE
Query: LELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
ELS GIQDLLKLERLQ EL ER G +PTFAQWA+AAGV+Q++LR+R+++GTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Subjt: LELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDA
Query: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
+KGFKFSTYAHWWIKQAVRK LSDQSR IRLPFHMVEATYRVKEARKQL E G+HP ++EIAEA GLSMKRL AVL++PK PRSL+QKIG+NQNLKPSE
Subjt: SKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSE
Query: VISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
VI+DPEA T ED+LIK+FM+QDL+KVLDSL REKQVIRWRFGMEDGRMKTLQEIGE+MGVSRER+RQIES AFRKLKNKKR HLQQY+++
Subjt: VISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVMS
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| AT1G64860.1 sigma factor A | 1.3e-36 | 29.7 | Show/hide |
Query: NNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGE-----PVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDE--------LSESITVKSKR
+ I + +A S S P + H + A+ ++ E D+ P G +K LE + DD+ S E LL + LS V S+
Subjt: NNINSSRAGTKSQSSPKPDALHFKWAQFMESERADIIGE-----PVGVNKRPMEGDALEPSTTESDDMEPTSEELELLQDE--------LSESITVKSKR
Query: QTERKARRTRAAEKTVTSVLSFKSGSSSRKKRN-----SVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW
+ R+ + T + + + + ++KK N +V +V +R + +L+ E + LS+ I+ L+L+ + L +R G EP+ Q
Subjt: QTERKARRTRAAEKTVTSVLSFKSGSSSRKKRN-----SVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A + +++ L+ L L ++K+ SN+RLV+SIA+ Y G + DLVQ G GL+RG EKFD+SKGF+ STY +WWI+Q V + L D SRT+RLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEV----ISDPEAET-----CEDMLIKQFMKQDLE
H+ E ++ A K L E G P IAE+ +S K++ SL++ + N P E I+D E +D+ +K+++
Subjt: HMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEV----ISDPEAET-----CEDMLIKQFMKQDLE
Query: KVLD-SLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM
K++ +L REK++IR +G+ D T ++I + +G+SRER+RQ+ A KLK+ R + ++ ++
Subjt: KVLD-SLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM
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| AT2G36990.1 RNApolymerase sigma-subunit F | 1.2e-64 | 39.04 | Show/hide |
Query: VKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW
V+SKRQ ER+A+ RA + + +S KK+ Q D D L+ T +LLTA EE EL IQ LLKLE+++ +L + G EPT +W
Subjt: VKSKRQTERKARRTRAAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW
Query: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
A A G++ L+ ++ G ++K+I +N+RLV+ IAK YQ G+N QDL+QEG GL++ EKF G +F+TYA+WWI+Q++RK + SRTIRLP
Subjt: AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPF
Query: HMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPR
++ +V EARK + E P +E+A G+S ++L +L + P S++Q I +Q+ E+ D ET + KQ M+ + +L+ L+P+
Subjt: HMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPR
Query: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
E+++I+ RFG++ G+ ++L EIGEI G+S+ER+RQ+ES A +LK + L Y
Subjt: EKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQY
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| AT3G53920.1 RNApolymerase sigma-subunit C | 2.1e-53 | 33.33 | Show/hide |
Query: SEELELLQDELSESITVKSKRQTERKARRTR-AAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERL
S+ EL+ ++ + V S+R+ ++KARR+ AE S L R N++ P +Y + SR E E+S G++ + +ER+
Subjt: SEELELLQDELSESITVKSKRQTERKARRTR-AAEKTVTSVLSFKSGSSSRKKRNSVQEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERL
Query: QEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ
+ +L E G + + WAAAAG+N++ L + L+YG C+D+++KS LV+ +A+NY+G G+ +DL+Q G G+++GAE+FD ++G+KFSTY +WI++
Subjt: QEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVRGAEKFDASKGFKFSTYAHWWIKQ
Query: AVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENG-RHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLI
++ +S +R + +P ++ +++ARK L +G ++ D+EIA+ G S+K++ A K S+++K+G K E D E+ E+ ++
Subjt: AVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENG-RHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDMLI
Query: KQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV
+Q ++D+ +L+ L PREKQV+ R+G++D R K+L+EIG+++ VS+E IR+IE A KL+++ + L+ Y+
Subjt: KQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYV
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| AT5G13730.1 sigma factor 4 | 5.4e-46 | 35.88 | Show/hide |
Query: SRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL
S L+ EE++L +++ KLE L + E NE A+ G +R+ + L ++K+ + RLV+SIA YQG G+NLQDL+QEG GL
Subjt: SRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQWAAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGL
Query: VRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIG
+RGAE+FD +G+K STY +WWIKQA+ + ++ +SR ++LP M E T +V EA L + R P +EIAE L++ + + ++P SL++
Subjt: VRGAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHENGRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIG
Query: INQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM
N + E++ P+ E+M+ ++ MK ++E++L SL RE +V+ FG+ + +EIG+ + +SRER+RQI A +KL+N L+ Y
Subjt: INQNLKPSEVISDPEAETCEDMLIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCAFRKLKNKKRTKHLQQYVM
Query: S
S
Subjt: S
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