| GenBank top hits | e value | %identity | Alignment |
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| KAA0045541.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 5.78e-60 | 72.48 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
MFSRLSSFH+SFSSPQ FT+ SV+LFPLS+ TLD EL QS P +AN + VSDD E P TP RRSTR KAM++ELQAL+KT+TWDYVDL
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
Query: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
PP +RPIGCKWIYKIKTHSD TIERYKARL+AKGYSQ+YGIDYEETFAP
Subjt: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| KAA0053710.1 retrotransposon protein [Cucumis melo var. makuwa] | 1.19e-58 | 71.92 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
MFSRLSSFH SFSSPQSFFT+ S+DLFPLS+ L EL QS P +A D +SD E P TP R+++ +KAM++ELQALEKT+TWDYVDL PG
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
Query: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
KRPIG KWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAP
Subjt: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| KAA0056932.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.73e-58 | 63.28 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR-----------------------------
MFSRLSSFHTSFSSPQSFFT+ S+DLFPLS+ T EL QS P +A D +SD + PP P RRSTR
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR-----------------------------
Query: -------KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
KAM++ELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
Subjt: -------KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| KAA0067103.1 retrotransposon protein [Cucumis melo var. makuwa] | 1.64e-63 | 73.15 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
MFSRLSS HTSFSSPQ FFT+ S+DLFPLSK L EL QS P A D +SD E P TP RRSTR KAM++ELQALEKTHT DYVDL
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
Query: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
PPGKR IGCKWIYKIKTHSDGTIERYKA LVAKGYSQ+YGIDYEETFAP
Subjt: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| TYK17748.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.69e-59 | 71.92 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
MFSRLSSFH SFSSPQSFFT+ S+DLFPLS+ L EL QS P +A D +SD E P TP R+++ +KAM++ELQALEKT+TWDYVDL PG
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
Query: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
KRPIG KWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAP
Subjt: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UES9 Retrotransposon protein | 5.77e-59 | 71.92 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
MFSRLSSFH SFSSPQSFFT+ S+DLFPLS+ L EL QS P +A D +SD E P TP R+++ +KAM++ELQALEKT+TWDYVDL PG
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
Query: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
KRPIG KWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAP
Subjt: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| A0A5A7UM60 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 8.37e-59 | 63.28 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR-----------------------------
MFSRLSSFHTSFSSPQSFFT+ S+DLFPLS+ T EL QS P +A D +SD + PP P RRSTR
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR-----------------------------
Query: -------KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
KAM++ELQALEK HTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
Subjt: -------KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| A0A5D3BEL1 Retrotransposon protein | 7.93e-64 | 73.15 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
MFSRLSS HTSFSSPQ FFT+ S+DLFPLSK L EL QS P A D +SD E P TP RRSTR KAM++ELQALEKTHT DYVDL
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
Query: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
PPGKR IGCKWIYKIKTHSDGTIERYKA LVAKGYSQ+YGIDYEETFAP
Subjt: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| A0A5D3D2J9 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.30e-59 | 71.92 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
MFSRLSSFH SFSSPQSFFT+ S+DLFPLS+ L EL QS P +A D +SD E P TP R+++ +KAM++ELQALEKT+TWDYVDL PG
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRST-----RKAMDEELQALEKTHTWDYVDLPPG
Query: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
KRPIG KWIYKIKTHSDGTIE YKARLVAKGYSQEYGIDYEETFAP
Subjt: KRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| A0A5D3DZA5 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 2.80e-60 | 72.48 | Show/hide |
Query: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
MFSRLSSFH+SFSSPQ FT+ SV+LFPLS+ TLD EL QS P +AN + VSDD E P TP RRSTR KAM++ELQAL+KT+TWDYVDL
Subjt: MFSRLSSFHTSFSSPQSFFTNPSVDLFPLSKPTLDTELVQSTPATANPDPPPVSDDVHESPPATPLRRSTR--------KAMDEELQALEKTHTWDYVDL
Query: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
PP +RPIGCKWIYKIKTHSD TIERYKARL+AKGYSQ+YGIDYEETFAP
Subjt: PPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 6.0e-12 | 42.67 | Show/hide |
Query: RRSTRKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
+ S +A++ EL A + +TW P K + +W++ +K + G RYKARLVA+G++Q+Y IDYEETFAP
Subjt: RRSTRKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 9.6e-18 | 49.35 | Show/hide |
Query: PLRRSTRKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
P + KAM EE+++L+K T+ V+LP GKRP+ CKW++K+K D + RYKARLV KG+ Q+ GID++E F+P
Subjt: PLRRSTRKAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| P92520 Uncharacterized mitochondrial protein AtMg00820 | 2.4e-16 | 54.29 | Show/hide |
Query: KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
+AM EEL AL + TW V P + +GCKW++K K HSDGT++R KARLVAKG+ QE GI + ET++P
Subjt: KAMDEELQALEKTHTWDYVDLPPGKRPIGCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.2e-15 | 50 | Show/hide |
Query: ESPPATPLR----RSTRKAMDEELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
ES P T ++ R AM E+ A HTWD V PP I GC+WI+ K +SDG++ RYKARLVAKGY+Q G+DY ETF+P
Subjt: ESPPATPLR----RSTRKAMDEELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 6.9e-16 | 55.56 | Show/hide |
Query: RKAMDEELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
R+AM E+ A HTWD V PP I GC+WI+ K +SDG++ RYKARLVAKGY+Q G+DY ETF+P
Subjt: RKAMDEELQALEKTHTWDYVDLPPGKRPI-GCKWIYKIKTHSDGTIERYKARLVAKGYSQEYGIDYEETFAP
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