; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6118 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6118
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionSep15_SelM domain-containing protein
Genome locationctg1425:2658214..2661764
RNA-Seq ExpressionCucsat.G6118
SyntenyCucsat.G6118
Gene Ontology termsGO:0005788 - endoplasmic reticulum lumen (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
InterPro domainsIPR014912 - Selenoprotein F/M domain
IPR036249 - Thioredoxin-like superfamily
IPR038219 - Selenoprotein F/M, thioredoxin-like domain superfamily
IPR039992 - Selenoprotein F/M


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039920.1 15 kDa selenoprotein [Cucumis melo var. makuwa]5.61e-11290.11Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCAEDSDDATSKIT
        MQLLPGVWN A AVTVAL ATAIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELV+DCLKCCAEDSDDATSKIT
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCAEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIE+DKDQFPSVKVQYTFNSPPKLILLDD+GQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

XP_004140597.1 selenoprotein F [Cucumis sativus]4.49e-120100Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

XP_008460012.1 PREDICTED: 15 kDa selenoprotein [Cucumis melo]3.98e-11494.74Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWN A AVTV L A AIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIE+DKDQFPSVKVQYTFNSPPKLILLDD+GQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

XP_022954272.1 selenoprotein F-like [Cucurbita moschata]1.68e-10187.79Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV N A  VT+A   TAIIFI+SMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI
        KLVFYPEIVGFIE++KDQFPSV VQYTFNSPPKLILLDD+GQHKESIRIDNWKREH LQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI

XP_038875398.1 selenoprotein F [Benincasa hispida]3.52e-10890.06Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGV N A AVT+A+ AT +IFI+SMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIE++KDQFPSVKVQY FNSPPKLILLDD+GQHKESIRIDNWKREH LQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

TrEMBL top hitse value%identityAlignment
A0A0A0KA30 Sep15_SelM domain-containing protein2.17e-120100Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

A0A1S3CC00 15 kDa selenoprotein1.93e-11494.74Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLLPGVWN A AVTV L A AIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCCAEDSDDATSKITYSGAVLEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        KLVFYPEIVGFIE+DKDQFPSVKVQYTFNSPPKLILLDD+GQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

A0A5A7T9G4 15 kDa selenoprotein2.72e-11290.11Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCAEDSDDATSKIT
        MQLLPGVWN A AVTVAL ATAIIFISSMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ           ELV+DCLKCCAEDSDDATSKIT
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQ-----------ELVSDCLKCCAEDSDDATSKIT

Query:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI
        YSGAVLEVCMRKLVFYPEIVGFIE+DKDQFPSVKVQYTFNSPPKLILLDD+GQHKESIRIDNWKREHFLQFLQEKVKRSSAI
Subjt:  YSGAVLEVCMRKLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI

A0A6J1GQK6 selenoprotein F-like8.12e-10287.79Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV N A  VT+A   TAIIFI+SMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI
        KLVFYPEIVGFIE++KDQFPSV VQYTFNSPPKLILLDD+GQHKESIRIDNWKREH LQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI

A0A6J1JXH9 selenoprotein F-like1.91e-10087.21Show/hide
Query:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR
        MQLL GV N A  VT+A   TAIIFI+SMPL WSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELV+DCLKCC EDSDDATSKITYSGA+LEVCMR
Subjt:  MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMR

Query:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI
        KLVFYPEIVGFIE++K QFPSV VQYTFNSPPKLILLDD+GQHKESIRIDNWKREH LQFL+EKVK RSSAI
Subjt:  KLVFYPEIVGFIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVK-RSSAI

SwissProt top hitse value%identityAlignment
A1Z623 Selenoprotein F3.6e-1935.37Show/hide
Query:  PGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVF
        PG W         L ATA+  +S+        + SS  C +LGF+   LC  C  L ++   Q L  DC  CC E++   T K+ Y+GA+LEVC  KL  
Subjt:  PGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVF

Query:  YPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKR
        +P++  F+  DK + F  ++++Y   S P L LLDD G   E + I  W  +   +FL EK++R
Subjt:  YPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKR

A8YXY3 Selenoprotein F4.7e-1937.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDKGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDKGQHKESIRIDNWKREHFLQFLQEKVKR

O60613 Selenoprotein F8.0e-1937.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLI
        + SS  C +LGF+   LCS C  L ++    +L  DC  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDKGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDKGQHKESIRIDNWKREHFLQFLQEKVKR

Q802F3 Selenoprotein F1.8e-1837.88Show/hide
Query:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLI
        +LSS  C +LGF+   LCS C  L ++  +Q L   C +CC E++     K+ Y GA+LEVC  KL  +P++  F+  DK + F  ++++Y   S P L 
Subjt:  QLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKDQ-FPSVKVQYTFNSPPKLI

Query:  LLDDKGQHKESIRIDNWKREHFLQFLQEKVKR
        LLDD G   E + I  W  +   +FL EK++R
Subjt:  LLDDKGQHKESIRIDNWKREHFLQFLQEKVKR

Q923V8 Selenoprotein F2.6e-1735.76Show/hide
Query:  LTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKD
        L ATA   +S++       + SS  C +LGF+   LCS C  L ++     L   C  CC E++   T K+ Y+GA+LEVC  KL  +P++  F+  DK 
Subjt:  LTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGFIEDDKD

Query:  Q-FPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKR
        + F  ++++Y   S P L LLDD G   E + I  W  +   +FL EK++R
Subjt:  Q-FPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKR

Arabidopsis top hitse value%identityAlignment
AT1G05720.1 selenoprotein family protein1.2e-6571.7Show/hide
Query:  IAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGF
        +A  V L+A  I+ ++S   + +KEQLS++ECEDLGF+GLALCSDCH+L+EY+KDQELVSDCLKCCA+DS+D+ SK+TYSGA+LEVCMRKLVFYPEIVGF
Subjt:  IAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVGF

Query:  IEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSA
        IE++K++FPSVKVQY FNSPPKLI+LD+ G+HKESIRIDNWKREH LQ+++EKVK ++A
Subjt:  IEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCTTCTCCCCGGAGTATGGAATTCCGCTATCGCGGTGACGGTAGCGTTAACTGCGACGGCGATCATTTTCATCTCGTCAATGCCGTTGGTTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACCGGCCTTGCTCTCTGTTCTGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGTCGGACTGTT
TAAAGTGTTGTGCCGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAGGTCTGCATGAGAAAGCTAGTTTTCTATCCTGAAATTGTTGGC
TTCATTGAAGACGATAAGGATCAATTCCCTTCAGTTAAGGTTCAATATACCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATAAGGGCCAGCATAAAGAAAGCAT
CAGGATTGATAATTGGAAACGAGAACATTTTTTGCAATTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAGCTTCTCCCCGGAGTATGGAATTCCGCTATCGCGGTGACGGTAGCGTTAACTGCGACGGCGATCATTTTCATCTCGTCAATGCCGTTGGTTTGGTCAAAGGAGCA
ACTCAGCTCGAGGGAATGTGAGGATCTAGGTTTCACCGGCCTTGCTCTCTGTTCTGATTGTCACACTTTAGCTGAATATATCAAAGATCAAGAATTAGTGTCGGACTGTT
TAAAGTGTTGTGCCGAGGATTCTGATGATGCCACGAGTAAGATAACTTATTCTGGTGCCGTGCTGGAGGTCTGCATGAGAAAGCTAGTTTTCTATCCTGAAATTGTTGGC
TTCATTGAAGACGATAAGGATCAATTCCCTTCAGTTAAGGTTCAATATACCTTCAACTCTCCACCGAAGCTGATTTTGCTGGATGATAAGGGCCAGCATAAAGAAAGCAT
CAGGATTGATAATTGGAAACGAGAACATTTTTTGCAATTCCTGCAAGAGAAGGTTAAGCGATCTTCAGCAATTTAA
Protein sequenceShow/hide protein sequence
MQLLPGVWNSAIAVTVALTATAIIFISSMPLVWSKEQLSSRECEDLGFTGLALCSDCHTLAEYIKDQELVSDCLKCCAEDSDDATSKITYSGAVLEVCMRKLVFYPEIVG
FIEDDKDQFPSVKVQYTFNSPPKLILLDDKGQHKESIRIDNWKREHFLQFLQEKVKRSSAI