; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6158 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6158
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRRM domain-containing protein
Genome locationctg1425:438424..441938
RNA-Seq ExpressionCucsat.G6158
SyntenyCucsat.G6158
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0004601 - peroxidase activity (molecular function)
GO:0020037 - heme binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140894.1 uncharacterized RNA-binding protein C1827.05c [Cucumis sativus]2.07e-151100Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_008456579.1 PREDICTED: uncharacterized RNA-binding protein C1827.05c [Cucumis melo]1.74e-14395.75Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL KATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022922397.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita moschata]4.39e-13791.51Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKLNKAT L S+KKESADFLPLEGGPGRKL  QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

XP_022993750.1 uncharacterized RNA-binding protein C1827.05c-like [Cucurbita maxima]6.23e-13789.62Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT   SDKKESADFLPLEGGPGRKL  QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKS+HFGY+EFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYRH+PL+WSELERK HNKERTL+EHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

XP_038885284.1 MKI67 FHA domain-interacting nucleolar phosphoprotein [Benincasa hispida]1.31e-13891.98Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT LS  K+ESADFLPLEGGPGRKL  QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL+EHKKLVDRI+KRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

TrEMBL top hitse value%identityAlignment
A0A0A0KCE3 RRM domain-containing protein2.87e-175100Show/hide
Query:  LPSSPLSGQFSPNPNSQPRYPTTYFQFLNSSMGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEG
        LPSSPLSGQFSPNPNSQPRYPTTYFQFLNSSMGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEG
Subjt:  LPSSPLSGQFSPNPNSQPRYPTTYFQFLNSSMGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEG

Query:  FFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKL
        FFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKL
Subjt:  FFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKL

Query:  VDRILKRDQARQKRIRAAGIDYECPEIVGGVQPTPKKIKFDED
        VDRILKRDQARQKRIRAAGIDYECPEIVGGVQPTPKKIKFDED
Subjt:  VDRILKRDQARQKRIRAAGIDYECPEIVGGVQPTPKKIKFDED

A0A1S3C4U7 uncharacterized RNA-binding protein C1827.05c8.44e-14495.75Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL KATPLSSDKKESADFLPLEGGPGRKL VQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGYVEFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EHKKLVDRILKRDQARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1E350 uncharacterized RNA-binding protein C1827.05c-like2.12e-13791.51Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKLNKAT L S+KKESADFLPLEGGPGRKL  QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS+HFGY+EF+
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JIS9 uncharacterized RNA-binding protein C1827.05c-like1.67e-13490.09Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT L S++ ESADFLPLEGGPGRKL  QKPLESTATVLYI RIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGY+EF+
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEHILKVHLI PEHVHPKLWKGFNYRH PLNWSELERK HNKERTL EH+KLV+RILKR+QARQKRIRAA IDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QPTPKKIKFDED
Subjt:  QPTPKKIKFDED

A0A6J1JZE0 uncharacterized RNA-binding protein C1827.05c-like3.02e-13789.62Show/hide
Query:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE
        MGAKA+KAMKKKL+KAT   SDKKESADFLPLEGGPGRKL  QKPLE+TATVLYIGRIPHGFFEKEMEGFFGQFGKVKR+RIARN+KTGKS+HFGY+EFE
Subjt:  MGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFE

Query:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV
        SPEVAKIVADSMHNYLLYEH+LKVHLI PEHVHPKLWKGFNYRH+PL+WSELERK HNKERTL+EHKKLV+RILKRDQAR+KRIRAAGIDYECPEIVG V
Subjt:  SPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIVGGV

Query:  QPTPKKIKFDED
        QP PKKIKFDED
Subjt:  QPTPKKIKFDED

SwissProt top hitse value%identityAlignment
O74978 Uncharacterized RNA-binding protein C1827.05c1.1e-2940.65Show/hide
Query:  RKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLW
        +K+S  K L+    VLY+GR+PHGF+EK+M  +F QFG V RLR++RN+KTG SKH+ ++EFES +VA +VA++MHNYLLY  +L+  +I  + VH  ++
Subjt:  RKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLW

Query:  KGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYE
        KG +   + +  + + R  H K  + E+  KL+ R  ++ + ++++++  GI  E
Subjt:  KGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYE

Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein8.7e-2736.67Show/hide
Query:  LSSDKKESADFLPLEGGPGRKLSVQKPLES-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLL
        LS + +E A F        R+ + Q+  +  T  V+Y+G +P   +E ++  +F QFG V R R++R+KKTG SK +G+VEFES +VAKI A++M+NYL 
Subjt:  LSSDKKESADFLPLEGGPGRKLSVQKPLES-TATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLL

Query:  YEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV
         E +LK H I PE VH +L++ ++   +  ++  ++R  +N+ R+L +  ++ +R  K+++  +KR+   GIDY  P +V
Subjt:  YEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECPEIV

Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like2.1e-2846.15Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE
        V+YIG IP   +E ++  +F QFG V RLR++R+KKTG SK + YVEFE  EVAKIVAD+M+NYL  E +LK   + PE VHP+L+ G   + R      
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE

Query:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP
        + R  +NK R+  E KK+  R+L ++   +KR+   GIDY+ P
Subjt:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like4.2e-2943.18Show/hide
Query:  LSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLY
        LS D K   DF        RK   +K    T  V+YIG IP    E +++ +F QFG V RLR++R+KKTG SK + YVE+E  EVAKIVAD+M+NYL  
Subjt:  LSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLY

Query:  EHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP
        E +LK   + PE VHP+L+ G N R R      + R  +N +R  EE KK+  R++ ++   +KR+   GIDY+ P
Subjt:  EHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP

Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein4.2e-2946.85Show/hide
Query:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE
        VLY+G +P G FE +++ +F QFGKV RLR++R+KKTG SK +G+VEFE  EVAKIVA++M+NYL+ E I+K H+I PE VH KL+ G     +   +  
Subjt:  VLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSE

Query:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP
        + R  +NK  T ++ KK+  ++L ++   +KR+ A GIDY+ P
Subjt:  LERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDYECP

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-0634.78Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG+++ FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHN

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein5.1e-0634.78Show/hide
Query:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHN
        ++S    L+IG I     E+ ++ +F  FG+V    I +++ TG+++ FG+V F  P VA+IV    HN
Subjt:  LESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHN

AT3G52660.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-0627.41Show/hide
Query:  DKKESADFLPLEGGPGRKLSVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH
        +++E  D +  E    +K  V+   L    + +Y+G IP    E +++GF G  G+V  +RI R K +G  K + +V F S ++A    D+++N      
Subjt:  DKKESADFLPLEGGPGRKLSVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH

Query:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK
         +K      +H   +L+ G    + P NW E + K
Subjt:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK

AT3G52660.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.3e-0627.41Show/hide
Query:  DKKESADFLPLEGGPGRKLSVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH
        +++E  D +  E    +K  V+   L    + +Y+G IP    E +++GF G  G+V  +RI R K +G  K + +V F S ++A    D+++N      
Subjt:  DKKESADFLPLEGGPGRKLSVQ-KPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEH

Query:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK
         +K      +H   +L+ G    + P NW E + K
Subjt:  ILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERK

AT5G04600.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.4e-7460.63Show/hide
Query:  MGAKARKAMKKKLNKAT--------PLSSDKKESADFLPLEGGPGRKLSV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS
        MGAKA+KA+KK + K          PL  + K SADFLPLEGGP RK  V   PL++ ATVLYIGRIPHGF+E E+E FF QFG VKR+R+ARNKKTGKS
Subjt:  MGAKARKAMKKKLNKAT--------PLSSDKKESADFLPLEGGPGRKLSV-QKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKRLRIARNKKTGKS

Query:  KHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDY
        KHFG+++FE PEVA+I A +M++YLL EH+LKVH+I+PE+V P LW+GF    +P++  ++ER+  NKERTLEEH+K++ +I+K+DQ R+KRI AAGI+Y
Subjt:  KHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGIDY

Query:  ECPEIVGGVQPTPKKIKFDED
        ECPE+VG  QP PK+IKF E+
Subjt:  ECPEIVGGVQPTPKKIKFDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCCTTCTTCTCCTCTTTCAGGTCAGTTCTCTCCAAACCCTAATTCTCAACCTCGATACCCCACCACCTACTTTCAATTTCTGAATTCTTCAATGGGGGCTAAGGCGAG
GAAAGCTATGAAGAAGAAACTCAATAAGGCTACTCCTCTTTCATCCGACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGGGCGTAAGTTATCGGTAC
AGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTAAAAAGA
TTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAAGCATTTTGGCTACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGATTCCATGCATAACTATTT
GTTGTATGAACACATTCTGAAAGTCCATCTAATTGATCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCCATAGGCCCTTAAACTGGTCTGAACTTG
AGCGTAAGCATCATAACAAGGAAAGGACATTGGAGGAACACAAGAAGTTGGTGGATAGAATATTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGGGCTGCTGGGATT
GATTATGAGTGTCCAGAAATTGTGGGTGGTGTCCAACCAACTCCCAAGAAGATCAAATTCGATGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
CTTCCTTCTTCTCCTCTTTCAGGTCAGTTCTCTCCAAACCCTAATTCTCAACCTCGATACCCCACCACCTACTTTCAATTTCTGAATTCTTCAATGGGGGCTAAGGCGAG
GAAAGCTATGAAGAAGAAACTCAATAAGGCTACTCCTCTTTCATCCGACAAGAAGGAATCTGCCGATTTCTTGCCGTTGGAGGGTGGTCCTGGGCGTAAGTTATCGGTAC
AGAAGCCATTGGAAAGTACTGCTACTGTTCTTTACATTGGCCGCATACCCCATGGTTTCTTCGAGAAGGAGATGGAAGGGTTTTTCGGACAGTTTGGGAAAGTAAAAAGA
TTAAGAATTGCACGAAATAAAAAGACGGGGAAGTCGAAGCATTTTGGCTACGTTGAATTTGAATCTCCAGAGGTAGCAAAAATTGTAGCTGATTCCATGCATAACTATTT
GTTGTATGAACACATTCTGAAAGTCCATCTAATTGATCCCGAGCATGTTCACCCCAAACTATGGAAAGGTTTTAACTATCGCCATAGGCCCTTAAACTGGTCTGAACTTG
AGCGTAAGCATCATAACAAGGAAAGGACATTGGAGGAACACAAGAAGTTGGTGGATAGAATATTGAAGCGGGATCAGGCTAGACAGAAGAGGATAAGGGCTGCTGGGATT
GATTATGAGTGTCCAGAAATTGTGGGTGGTGTCCAACCAACTCCCAAGAAGATCAAATTCGATGAAGATTAG
Protein sequenceShow/hide protein sequence
LPSSPLSGQFSPNPNSQPRYPTTYFQFLNSSMGAKARKAMKKKLNKATPLSSDKKESADFLPLEGGPGRKLSVQKPLESTATVLYIGRIPHGFFEKEMEGFFGQFGKVKR
LRIARNKKTGKSKHFGYVEFESPEVAKIVADSMHNYLLYEHILKVHLIDPEHVHPKLWKGFNYRHRPLNWSELERKHHNKERTLEEHKKLVDRILKRDQARQKRIRAAGI
DYECPEIVGGVQPTPKKIKFDED