; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6181 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6181
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Genome locationctg1425:815751..819336
RNA-Seq ExpressionCucsat.G6181
SyntenyCucsat.G6181
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0030422 - production of siRNA involved in RNA interference (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0070919 - production of siRNA involved in chromatin silencing by small RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016020 - membrane (cellular component)
GO:0031380 - nuclear RNA-directed RNA polymerase complex (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR007523 - NDUFAF3/Mth938 domain-containing protein
IPR036748 - MTH938-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460070.1 PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo]1.16e-9295.8Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLP+LIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKF EIT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
XP_031742645.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]1.49e-9599.3Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKF EITSDSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
XP_031743290.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]1.49e-9599.3Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKF EITSDSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
XP_031745505.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus]3.50e-9497.9Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAAR KAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKF EITSDSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEILILGCGRYT+PVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
XP_038906819.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida]3.87e-9194.41Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLPNLIR+L+NDRR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKF EIT +SLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
TrEMBL top hitse value%identityAlignment
A0A1S3CB84 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 35.64e-9395.8Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLP+LIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKF EIT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
A0A5A7TES8 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 35.64e-9395.8Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLP+LIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKF EIT DSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQIVRPIPEIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
A0A6J1DH82 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 33.17e-8086.52Show/hide
Query:  ARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIF
        ARQK VATLPNLIR+L+ DRR+PG SQPLPSLRRAFSLYDQINL     EDQLRFQRYTETGFTVNGVDYEGSLLCVG+LLMSW+P+KF EIT++SLSIF
Subjt:  ARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIF

Query:  QIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        QIVRPIPEIL+LGCG+YTEPVNPELRQFIRSTGMKLEAVDT
Subjt:  QIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
A0A6J1HIQ3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 33.42e-8788.81Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLPNLIR+++ DRR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSW+PKKF EIT +SLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQI+RPIPEIL+LGCGRY EPVNP+LRQFIRSTGMKLEAVD+
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
A0A6J1KD25 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 35.64e-8688.11Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MAARQKAVATLPNLIR+++ DRR+PG SQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ YTETGFTVNG+DYEGSLLCVG+LLMSW+PKKF EIT +SLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQI+RPIPEIL+LGCGRY EPVNPELRQFIRSTGMKLEAVD+
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
SwissProt top hitse value%identityAlignment
O08776 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 32.9e-0829.7Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+ N     +    Y   GFT+NG    G    +   ++ W      +IT +S SIF ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Q2HJI2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 32.4e-0727.72Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+       +    Y+  GF VNG    G    +   ++ W    + +IT +S S+F ++ P  EI+++G G  TE + P + + +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Q6DFN1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 32.2e-0830.23Show/hide
Query:  QRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        + Y+  GF +NG    G    +   ++ W    + +I  +SLS+F ++ P  EIL++G G   E ++P + +F+R  G+ +E  DT
Subjt:  QRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
Q9BU61 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 31.9e-0727.72Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+       +    Y   GF +NG    G    + + ++ W      +IT DS S+F ++ P  EI+++G G  TE +  ++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Q9JKL4 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 38.3e-0827.72Show/hide
Query:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD
        +I+L+ +     +    Y+  GFT+ G    G  + +   ++ W      +IT +S S+F ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  D
Subjt:  QINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVD

Query:  T
        T
Subjt:  T
Arabidopsis top hitse value%identityAlignment
AT2G44525.1 Protein of unknown function (DUF498/DUF598)4.6e-5471.53Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSL
        MA R K++ATLP LI++++  +  P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ + +T FTVNGV YEGSLLCVGNLLMSW+P+KF EIT+DSL
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSL

Query:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        SIFQ VRPIPE+LI+GCGR   PV PE+RQF++S GMKLE VD+
Subjt:  SIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
AT3G60150.1 Protein of unknown function (DUF498/DUF598)3.8e-5672.73Show/hide
Query:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS
        MA RQKA+ATLP LI++++N+  K   S  LPSLRRAFSLYDQINLIDNVPEDQLRFQ + ET FTVNGV YEGSLLCVGNLLMSW+P+ F +IT+DSLS
Subjt:  MAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLS

Query:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT
        IFQ VRPIPE+LI+GCGRY  P+NP++RQF++S GMKLE VD+
Subjt:  IFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGATCCCTTCTCCTCCGTTGTCTGCACTGCCGCGCGACTCTCCGGCCGTCTGTATACGGTCTCTCCGTCGCAGGTCGTCTCTTCGCAAAGCTACTGCTCGATTTCTTTCG
CAAAACACTAAATGAAAAATGCAATTGTATCAAAGTTGATGTCCTAAAGAAGAAAAGTAAAAGAGAAAAAGGGATTTGGGGGCGAAACTCCGGGACGGGAACAGAGGGCC
TGAGAAAAATGGCGGCAAGGCAGAAAGCGGTGGCGACGCTGCCTAATCTAATTAGAACCCTTAAAAATGATCGCCGGAAGCCTGGTTTCAGCCAGCCTCTTCCGTCATTG
AGACGTGCCTTTTCACTTTACGATCAGATCAATCTCATTGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGA
TTATGAGGGCAGCTTGCTTTGTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTTGGAAATTACGTCTGATAGCTTATCTATCTTCCAGATTGTGCGCCCTA
TTCCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTA
CTTTTGGTTTGA
mRNA sequenceShow/hide mRNA sequence
CGATCCCTTCTCCTCCGTTGTCTGCACTGCCGCGCGACTCTCCGGCCGTCTGTATACGGTCTCTCCGTCGCAGGTCGTCTCTTCGCAAAGCTACTGCTCGATTTCTTTCG
CAAAACACTAAATGAAAAATGCAATTGTATCAAAGTTGATGTCCTAAAGAAGAAAAGTAAAAGAGAAAAAGGGATTTGGGGGCGAAACTCCGGGACGGGAACAGAGGGCC
TGAGAAAAATGGCGGCAAGGCAGAAAGCGGTGGCGACGCTGCCTAATCTAATTAGAACCCTTAAAAATGATCGCCGGAAGCCTGGTTTCAGCCAGCCTCTTCCGTCATTG
AGACGTGCCTTTTCACTTTACGATCAGATCAATCTCATTGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGA
TTATGAGGGCAGCTTGCTTTGTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTTGGAAATTACGTCTGATAGCTTATCTATCTTCCAGATTGTGCGCCCTA
TTCCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTA
CTTTTGGTTTGA
Protein sequenceShow/hide protein sequence
RSLLLRCLHCRATLRPSVYGLSVAGRLFAKLLLDFFRKTLNEKCNCIKVDVLKKKSKREKGIWGRNSGTGTEGLRKMAARQKAVATLPNLIRTLKNDRRKPGFSQPLPSL
RRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFLEITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTV
LLV