CuGenDBv2

Gene ID	Cucsat.G6190
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	WD repeat protein
Genome location	ctg1425:976406..980425
RNA-Seq Expression	Cucsat.G6190
Synteny	Cucsat.G6190
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140944.1 uncharacterized protein LOC101218374 [Cucumis sativus]

1.12e-137

100

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Query:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_008456707.1 PREDICTED: uncharacterized protein LOC103496571 [Cucumis melo]

5.10e-134

96.35

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Query:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_022990468.1 uncharacterized protein LOC111487320 [Cucurbita maxima]

2.77e-123

89.58

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Query:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL++ NPSSNS++VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT LS  R+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_023518857.1 uncharacterized protein LOC111782248 [Cucurbita pepo subsp. pepo]

2.28e-122

89.06

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Query:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL++ N SSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITI+IT LS  R+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

XP_038884244.1 uncharacterized protein LOC120075142 [Benincasa hispida]

2.65e-129

92.71

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Query:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVE+T+SKSELQPLLE+ NP+ NSK V+TKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDIL+KYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVA+ITILITFLSRDSQGWMKK NITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K9G4 Uncharacterized protein

5.40e-138

100

Show/hide

Query:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

A0A1S3C3V7 uncharacterized protein LOC103496571

2.47e-134

96.35

Show/hide

Query:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
        MDQSE+EIREV+ETNSKSELQPLLET NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN
Subjt:  MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFN

Query:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  PRNGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

A0A6J1BYH2 uncharacterized protein LOC111006735

1.23e-119

86.77

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Query:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        Q+ESEIRE+EET S SE QPLL++ NPSS+SK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGWDQDQLE+R+ILDKYGFKS FAFKP++GRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYG
        NGRSILTYRDGAEI+IDGEPKDSLIKP+TRIIFGVAI+TILITFLSR+SQG MKKLNI+GNFPPWILACVVIVFTRSRKRT+DLLKK+G
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYG

A0A6J1HAT7 uncharacterized protein LOC111461110

1.50e-120

88.02

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Query:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL++ NPSSNSK+VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYR GAEI+IDGEPKDSLIKPVT I+F VAIITI+IT LS  R SQGWMK LNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

A0A6J1JTD1 uncharacterized protein LOC111487320

1.34e-123

89.58

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Query:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR
        QSESEIRE+EET+S SELQPLL++ NPSSNS++VKTKVPE+EIHL+RQGKGPIDVFKSSLGGW+QDQLEVR+ILDKYGFKSVFAFKPDSGRGVPIRFNPR
Subjt:  QSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPR

Query:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        NGRSILTYRDGAEI+IDGEPKDSLIKPVTRI+F VAIITILIT LS  R+SQGWMKKLNITGNFPPWILACVVIVFTRSRKRT+DLLKKYGW
Subjt:  NGRSILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLS--RDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G71780.1 unknown protein

2.4e-67

63.44

Show/hide

Query:  REVEETNSKSELQPLLETHNPSS--NSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS
        +E+EET       PLLE   P S   S +   KVPE+EIHL++ GKGPIDVFKS+LGG++QDQLEVR IL+KYG K++FAF  + GR VPIRF+PRNGRS
Subjt:  REVEETNSKSELQPLLETHNPSS--NSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRS

Query:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW
        +L YRDGA I+IDGEP+DSL+KP+TRII GV I+T+LITFL +D   W+K     G FPPW+LAC+VIVFTR+RKRT+D  KKYGW
Subjt:  ILTYRDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

Sequences

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CDS sequence

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ATGGATCAAAGCGAGAGCGAAATTCGAGAAGTTGAAGAAACAAATTCCAAATCGGAGTTGCAACCTCTTCTTGAGACACACAATCCAAGTTCGAACTCCAAATCTGTGAA
GACCAAGGTTCCGGAGATTGAGATCCATCTTTTTCGTCAGGGAAAAGGTCCGATCGATGTGTTTAAATCAAGCCTTGGTGGTTGGGATCAAGATCAGCTTGAGGTCCGAG
ATATTCTGGACAAATACGGATTCAAGTCCGTATTCGCCTTCAAACCTGACTCTGGTCGTGGCGTCCCCATTCGATTCAACCCTAGAAATGGCAGGTCTATACTGACTTAC
AGAGATGGAGCCGAAATTTTCATTGACGGAGAGCCTAAGGATTCCCTGATCAAACCAGTAACCAGGATCATTTTTGGCGTGGCAATTATAACCATTTTGATAACGTTTCT
CTCTCGAGACTCACAAGGGTGGATGAAGAAACTTAATATCACTGGGAACTTCCCTCCTTGGATTCTAGCTTGTGTCGTTATCGTTTTTACGCGCTCAAGGAAGAGAACTA
AGGACTTACTTAAAAAGTACGGTTGGTAA

mRNA sequence

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Protein sequence

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MDQSESEIREVEETNSKSELQPLLETHNPSSNSKSVKTKVPEIEIHLFRQGKGPIDVFKSSLGGWDQDQLEVRDILDKYGFKSVFAFKPDSGRGVPIRFNPRNGRSILTY
RDGAEIFIDGEPKDSLIKPVTRIIFGVAIITILITFLSRDSQGWMKKLNITGNFPPWILACVVIVFTRSRKRTKDLLKKYGW

Cucsat.G6190 (gene) of Cucumber (B10) v3 genome