CuGenDBv2

Gene ID	Cucsat.G641
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1
Genome location	ctg1:12533602..12538584
RNA-Seq Expression	Cucsat.G641
Synteny	Cucsat.G641
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process) GO:0009507 - chloroplast (cellular component)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6574156.1 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

7.76e-161

81.44

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Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        M  +I SP PL +L+S   FRAK+ +K P I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA  T AQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFL+GA+PSGEA LPEG EQIF+LSQ +SDN+K+D+AWATYILLRNTNSISVLIQ QG LCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDD
        LQSIGLSAL DA+YFPQIS       ESGLWQMLPKGTRSVLVQPV QNL QSGNE++ +GGFIL+ASSLSYAFSDKDRAWIRA+A KFD+
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDD

XP_004140790.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucumis sativus]

2.60e-197

97.63

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Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSALKDAVYFPQIS       ESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

XP_016899091.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo]

9.29e-191

94.24

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Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLNQLTSAL FRAKSK K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFLKGA+PSGEA LPEGTEQIFLLSQI+SDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSALKDAVYFPQIS       ESGLWQMLPKGTRSVLVQPVVQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

XP_031738698.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis sativus]

8.39e-207

100

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Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

XP_038884000.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida]

4.51e-182

89.49

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Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLN+LTSA  FRAK+KTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LG+SLAAFSIALPYLGKFLKGA+PSGEA LP  TEQIFLLSQI+SDN+KED+AWATYILLRNTNSISVLIQ QGALCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQ IGLSALKDA+YFPQIS       ESGLWQMLP+GTRSVLVQPVVQNLKQ+G+E++ MGGFILLASSLSYAF DKDRAWIRA+ANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBA9 Uncharacterized protein

1.26e-197

97.63

Show/hide

Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSALKDAVYFPQIS       ESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

4.50e-191

94.24

Show/hide

Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLNQLTSAL FRAKSK K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFLKGA+PSGEA LPEGTEQIFLLSQI+SDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSALKDAVYFPQIS       ESGLWQMLPKGTRSVLVQPVVQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

A0A5A7SUJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2

4.50e-191

94.24

Show/hide

Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        MISSIPSPSPLNQLTSAL FRAKSK K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFLKGA+PSGEA LPEGTEQIFLLSQI+SDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSALKDAVYFPQIS       ESGLWQMLPKGTRSVLVQPVVQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFDDRAIL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

1.63e-160

81.02

Show/hide

Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        M  SI SP+PL +LTS   FRAK++ K PA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LG+SLAAFSIALPYLGKFLKGA+PSGEA LPEGTEQIF+LSQ +SDN+KED+AWATYILLRNTNSISVLIQ +G LCVRGYWNSPNDI  ADL+AWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL
        LQSIGLSAL D +YFPQIS       +S LW+MLP GTRSVLVQPV    KQSGN+++ +GGFILLASSLSYAFSDKDRAWIRA+ANKF DR IL
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

2.24e-159

80.76

Show/hide

Query:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA
        M  +I SP PL +L+S   FRAK+ +K P I+ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTEA
Subjt:  MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEA

Query:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ
        LGISLAAFSIALPYLGKFL+GA+PSGEA LPEG EQIF+LSQ +SDN+K+D+AWATYILLRNTNSISVLIQ QG LCVRGYWNSPNDIS ADLLAWFEEQ
Subjt:  LGISLAAFSIALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQ

Query:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDD
        LQSIGLSAL DA+YFPQIS       ESGLWQMLPKGTRSVLVQPV QNL QSGNE++ +GGFIL+ASSLSYAFSDKDRAWIRA+A KFD+
Subjt:  LQSIGLSALKDAVYFPQISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDD

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

1.3e-77

55.68

Show/hide

Query:  ALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLG
        AL  RA+  T+  A +        +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY+G
Subjt:  ALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLG

Query:  KFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP
        KFLKG++   +  LPE  EQ+F++S  + D+LKED+AWATY+LLRNT++I+VLI  QG LCVRGYWN P+ +S A L  WF++++  IGL+ +K+ +YFP
Subjt:  KFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP

Query:  QISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKF
        Q +G       +    +LP GTRS+ VQP+VQN     NE Q + GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  QISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKF

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

9.4e-79

55.68

Show/hide

Query:  ALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLG
        AL  RA+  T+  A +        +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY+G
Subjt:  ALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLG

Query:  KFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP
        KFLKG++   +  LPE  EQ+F++S  + D+LKED+AWATY+LLRNT++I+VLI  QG LCVRGYWN P+ +S A L  WF++++  IGL+ +K+ +YFP
Subjt:  KFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP

Query:  QISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKF
        Q +G       +    +LP GTRS+ VQP+VQN     NE Q + GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  QISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKF

AT5G52110.2 Protein of unknown function (DUF2930)

9.4e-79

55.68

Show/hide

Query:  ALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLG
        AL  RA+  T+  A +        +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY+G
Subjt:  ALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLG

Query:  KFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP
        KFLKG++   +  LPE  EQ+F++S  + D+LKED+AWATY+LLRNT++I+VLI  QG LCVRGYWN P+ +S A L  WF++++  IGL+ +K+ +YFP
Subjt:  KFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFP

Query:  QISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKF
        Q +G       +    +LP GTRS+ VQP+VQN     NE Q + GF+L+AS+  YA+SDKDRAWI A+A KF
Subjt:  QISGFQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCAGCTCAATTCCCTCTCCCTCCCCGTTGAATCAGTTGACGTCCGCTCTCTCTTTTCGCGCTAAAAGTAAGACGAAGGGGCCAGCAATTTCTGCTCGTCTTGACGA
TTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTCCGGTTCACACTCGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGATATGGATTTG
GTTCACTTCTTCTATTGAATCACTTTGTTGGTTCGAATTCAGCTGCTCTCACCACCCCAGCACAATTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATT
GCACTCCCCTACTTGGGAAAGTTTCTTAAGGGTGCACTTCCATCTGGCGAAGCTATCCTCCCTGAAGGCACTGAGCAAATATTTCTCTTGTCACAAATATTATCGGATAA
CTTGAAGGAAGACATTGCTTGGGCAACATACATCTTGCTGCGCAACACAAACAGTATATCAGTGCTAATTCAGACTCAAGGGGCATTGTGTGTTCGAGGATACTGGAATA
GTCCAAATGATATATCATCAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTGTCTGCATTAAAGGATGCCGTCTATTTCCCTCAGATTTCAGGT
TTTCAGCACTATTTTCCAGAATCTGGACTGTGGCAAATGCTGCCCAAGGGCACTCGCTCGGTTTTGGTACAGCCAGTGGTTCAAAATCTAAAGCAAAGTGGCAATGAGGT
GCAAAACATGGGAGGATTCATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGTGATAAAGATAGAGCCTGGATAAGAGCTGTTGCCAACAAGTTTGATGACAGAGCCA
TCCTCTGA

mRNA sequence

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Protein sequence

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MISSIPSPSPLNQLTSALSFRAKSKTKGPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSI
ALPYLGKFLKGALPSGEAILPEGTEQIFLLSQILSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRGYWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFPQISG
FQHYFPESGLWQMLPKGTRSVLVQPVVQNLKQSGNEVQNMGGFILLASSLSYAFSDKDRAWIRAVANKFDDRAIL

Cucsat.G641 (gene) of Cucumber (B10) v3 genome