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Cucsat.G646 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G646
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionUnknown protein
Genome locationctg1:12636523..12638322
RNA-Seq ExpressionCucsat.G646
SyntenyCucsat.G646
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013222.1 hypothetical protein SDJN02_25980 [Cucurbita argyrosperma subsp. argyrosperma]4.00e-4069.52Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNH-PTSGSARINGRSTRRSRRISSPPYTSTQDQA
        M SHVQF++TGP WT+EKH+HFLNS+EASFVRSM++N  HRRRLRL+RLLPDTADSTLDS   + KNH PT+G  R++GRS+RRSRRISS P  S QDQ 
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNH-PTSGSARINGRSTRRSRRISSPPYTSTQDQA

Query:  SAETI
        S  +I
Subjt:  SAETI

XP_004140781.1 uncharacterized protein LOC101217506 [Cucumis sativus]1.53e-6198.98Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRR LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

XP_008439192.1 PREDICTED: uncharacterized protein LOC103484063 [Cucumis melo]9.82e-5893.88Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGP WTNEKHMHFLNS+EASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSP NHTKNHPTSGSAR+NGRSTRRSRR SSPPY+STQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

XP_038882732.1 uncharacterized protein LOC120073889 isoform X1 [Benincasa hispida]5.09e-4480Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++TGP WTNEKHMHFLNS+EASFV+SMF+NR H RRRLRLDR LPDTADSTLDSP  + TKNH TS + RINGRS+RRSRRISS P+TSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

XP_038882735.1 uncharacterized protein LOC120073889 isoform X2 [Benincasa hispida]1.63e-4280Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++TGP WTNEKHMHFLNS+EASFV+SMF+NR H RRRLRLDR LPDTADSTLDSP  + TKNH TS   RINGRS+RRSRRISS P+TSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAH-RRRLRLDRLLPDTADSTLDSPH-NHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

TrEMBL top hitse value%identityAlignment
A0A0A0L5V0 Uncharacterized protein7.43e-6298.98Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRR LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

A0A1S3AYV4 uncharacterized protein LOC1034840634.75e-5893.88Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQFTQTGP WTNEKHMHFLNS+EASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSP NHTKNHPTSGSAR+NGRSTRRSRR SSPPY+STQDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

A0A6J1CHV7 uncharacterized protein LOC1110116403.31e-4074.75Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRR-LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF +TG  WTNEKHMHFLNS+EASFVRSMF+NR HRRR LRLDR LPDT+DSTLDSP    KNH TSG+A I+GRS+ RSR  SS P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRR-LRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

A0A6J1J606 uncharacterized protein LOC111482903 isoform X25.70e-4074.49Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRRRLRLDR L DTADSTLDSP  + K H  SG+ R++GRS+RRSRRI S P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

A0A6J1JBA6 uncharacterized protein LOC111482903 isoform X12.92e-4073.47Show/hide
Query:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ
        MESHVQF++T P WTNEKHMHFLNS+EASFVRSMF+NR HRRRLRLDR L DTADSTLDSP  + K H  S   R++GRS+RRSRRI S P+TS QDQ
Subjt:  MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCGCATGTGCAATTCACCCAAACCGGGCCGCTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCGTGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAA
TCGCGCACATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACCAAAAACCATCCCACCTCCGGAAGTG
CAAGAATCAACGGTAGATCTACGAGGAGATCTAGGAGGATATCATCTCCACCGTACACTTCAACTCAAGATCAGGCTAGTGCAGAAACTATATACTATAAATTTAAACAT
TACATTTCTTTCTTTCTTTTATCTCTACTAATAATAGAAATGACCTATTTGTTTTTGTCTTTATCTCCTTCTTTTTCCATCGAAATAATTATGCTGCCTTTTTTTTTTTT
TTGCGGCTGGTGTGGGTATTTTGGAAATGCCACGTGGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAATCGCATGTGCAATTCACCCAAACCGGGCCGCTTTGGACTAATGAGAAGCACATGCACTTCTTGAATTCCGTGGAAGCTTCTTTCGTCCGATCAATGTTCCAAAA
TCGCGCACATCGCCGCCGTCTACGGCTGGACCGCCTCTTGCCGGACACCGCTGACTCAACCCTAGATTCCCCTCATAACCACACCAAAAACCATCCCACCTCCGGAAGTG
CAAGAATCAACGGTAGATCTACGAGGAGATCTAGGAGGATATCATCTCCACCGTACACTTCAACTCAAGATCAGGCTAGTGCAGAAACTATATACTATAAATTTAAACAT
TACATTTCTTTCTTTCTTTTATCTCTACTAATAATAGAAATGACCTATTTGTTTTTGTCTTTATCTCCTTCTTTTTCCATCGAAATAATTATGCTGCCTTTTTTTTTTTT
TTGCGGCTGGTGTGGGTATTTTGGAAATGCCACGTGGATATAG
Protein sequenceShow/hide protein sequence
MESHVQFTQTGPLWTNEKHMHFLNSVEASFVRSMFQNRAHRRRLRLDRLLPDTADSTLDSPHNHTKNHPTSGSARINGRSTRRSRRISSPPYTSTQDQASAETIYYKFKH
YISFFLLSLLIIEMTYLFLSLSPSFSIEIIMLPFFFFCGWCGYFGNATWI