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Cucsat.G6461 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6461
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNADH-ubiquinone oxidoreductase chain 5
Genome locationctg1449:270474..272171
RNA-Seq ExpressionCucsat.G6461
SyntenyCucsat.G6461
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020712.1 hypothetical protein SDJN02_17399 [Cucurbita argyrosperma subsp. argyrosperma]4.70e-6884.11Show/hide
Query:  LMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFL
        L LSLNSISQFL+  +  CF SS LH   +S EAK+ RSRG+A  MITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FL
Subjt:  LMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFL

Query:  VFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_004144225.1 uncharacterized protein LOC101213289 [Cucumis sativus]2.39e-89100Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_008464874.1 PREDICTED: uncharacterized protein LOC103502637 isoform X1 [Cucumis melo]2.28e-8798.67Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV FLCRCF SSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_022951473.1 uncharacterized protein LOC111454282 [Cucurbita moschata]5.04e-6984.77Show/hide
Query:  LMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFL
        L LSLNSISQFL+ F+  CF SS LH   +S EAK+ RSRG+A  MITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FL
Subjt:  LMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFL

Query:  VFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

XP_038884232.1 uncharacterized protein LOC120075129 [Benincasa hispida]7.19e-7993.33Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+CRC  SSILH   SSLEAKKR+SRGSA  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

TrEMBL top hitse value%identityAlignment
A0A0A0KIH9 Uncharacterized protein1.16e-89100Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A1S3CMK7 uncharacterized protein LOC103502637 isoform X11.10e-8798.67Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV FLCRCF SSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1G568 uncharacterized protein LOC1114507862.62e-6682Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C    ILH   S    +K  SRG+A  MITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+LVCITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1GHS6 uncharacterized protein LOC1114542822.44e-6984.77Show/hide
Query:  LMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFL
        L LSLNSISQFL+ F+  CF SS LH   +S EAK+ RSRG+A  MITRSNLVEQLREYQIRSKHEWASVS FSS SNITSSRVDVVIFVIWELIIL+FL
Subjt:  LMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFL

Query:  VFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        VFSAVSLYFRHMQLA ILVCITMLLL+CMKVTKQVRLARKKKRRMLLPLSM
Subjt:  VFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

A0A6J1KBR2 uncharacterized protein LOC1114940241.51e-6580.67Show/hide
Query:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV
        MLSLNSISQFLV F+C C    I H   S    +K  SRG+A  MITRSNLVEQLREYQIRSKH+WAS SFFSSTSNITSSRVDVVIFVIWELIILSFLV
Subjt:  MLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLV

Query:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM
        FSAVSLYFRHMQL F+L+CITMLL++CMKVTKQ+RLARKKKRRMLLPLSM
Subjt:  FSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G20460.1 unknown protein1.2e-4286.79Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL+IL+F VFSAVSLYF+ +QLAFILVC+T+LLL+CMKVTKQVRLARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM

AT1G76185.1 unknown protein5.1e-4183.96Show/hide
Query:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM
        MITRSNL EQLREYQIRSKH+WASVSFFSSTSN +SSRVDVV+FVIWEL++L+ +VFSAVSLYFR +QLAFIL+C+T+LLLLCMK+TKQVR ARKKKRRM
Subjt:  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRM

Query:  LLPLSM
        LLPLSM
Subjt:  LLPLSM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGAATTTTGGGGGAGAAGAAGGCCGGGGGGTGGGGGTGTGGGGGGGTGAAGGAGTAGTGAGAGAAGGTCCACGCAGCGCATTCCAACAAACAAACCCCCTCCAACCTGA
ACCACTGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCTCAATTCCTTGTTTCATTCCTTTGTCGCTGCTTTCATTCCTCCATTCTTCACCTTCCCTCTTCCT
CCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGG
GCTTCCGTCTCCTTCTTCTCCTCTACCTCCAATATTACGTCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCCTGGTGTTCTCGGC
AGTTTCTTTATATTTTCGGCATATGCAGTTGGCATTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGA
AGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA
mRNA sequenceShow/hide mRNA sequence
TGGAATTTTGGGGGAGAAGAAGGCCGGGGGGTGGGGGTGTGGGGGGGTGAAGGAGTAGTGAGAGAAGGTCCACGCAGCGCATTCCAACAAACAAACCCCCTCCAACCTGA
ACCACTGCGAATTGAACGCCTCATGCTCTCTCTCAATTCCATTTCTCAATTCCTTGTTTCATTCCTTTGTCGCTGCTTTCATTCCTCCATTCTTCACCTTCCCTCTTCCT
CCCTTGAGGCAAAGAAAAGAAGGTCTCGGGGTTCAGCTTCAGCCATGATTACTCGATCGAATCTGGTTGAGCAGTTGAGAGAATACCAGATTCGATCCAAACACGAGTGG
GCTTCCGTCTCCTTCTTCTCCTCTACCTCCAATATTACGTCCTCCAGGGTGGATGTAGTGATTTTTGTAATATGGGAACTCATAATACTATCGTTCCTGGTGTTCTCGGC
AGTTTCTTTATATTTTCGGCATATGCAGTTGGCATTTATTTTAGTATGCATTACGATGTTGTTGCTTCTATGCATGAAAGTTACAAAGCAAGTGAGATTGGCTAGGAAGA
AGAAAAGAAGGATGCTTCTTCCATTGTCCATGTGA
Protein sequenceShow/hide protein sequence
WNFGGEEGRGVGVWGGEGVVREGPRSAFQQTNPLQPEPLRIERLMLSLNSISQFLVSFLCRCFHSSILHLPSSSLEAKKRRSRGSASAMITRSNLVEQLREYQIRSKHEW
ASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAVSLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM