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Cucsat.G6525 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6525
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionXyloglucan endotransglucosylase/hydrolase
Genome locationctg1450:60831..62419
RNA-Seq ExpressionCucsat.G6525
SyntenyCucsat.G6525
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0010411 - xyloglucan metabolic process (biological process)
GO:0042546 - cell wall biogenesis (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0048046 - apoplast (cellular component)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
GO:0016762 - xyloglucan:xyloglucosyl transferase activity (molecular function)
InterPro domainsIPR000757 - Glycoside hydrolase family 16
IPR008263 - Glycoside hydrolase, family 16, active site
IPR013320 - Concanavalin A-like lectin/glucanase domain superfamily
IPR044791 - Beta-glucanase/XTH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CCH26416.1 xyloglucan endotransglycosylase, partial [Cucumis sativus]1.71e-84100Show/hide
Query:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
        MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
Subjt:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS

Query:  DTDTIRDELDFEFLGNRSGQPYTVQTNI
        DTDTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  DTDTIRDELDFEFLGNRSGQPYTVQTNI

XP_008458951.1 PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 7 [Cucumis melo]1.02e-7492.37Show/hide
Query:  MKGLRGFDVIGLFVI--CMYVVALS-IVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFY
        MKGLR  +VIGLFVI   +YVVAL  +VVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFY
Subjt:  MKGLRGFDVIGLFVI--CMYVVALS-IVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFY

Query:  MNSDTDTIRDELDFEFLGNRSGQPYTVQTNI
        MNSDTDTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  MNSDTDTIRDELDFEFLGNRSGQPYTVQTNI

XP_011655092.1 probable xyloglucan endotransglucosylase/hydrolase protein 7 [Cucumis sativus]5.12e-84100Show/hide
Query:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
        MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
Subjt:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS

Query:  DTDTIRDELDFEFLGNRSGQPYTVQTNI
        DTDTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  DTDTIRDELDFEFLGNRSGQPYTVQTNI

XP_022941679.1 probable xyloglucan endotransglucosylase/hydrolase protein 6 [Cucurbita moschata]6.63e-7290.32Show/hide
Query:  RGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT
        R F+ +G  V+C+ VVALSI VSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQ+SGCGFAS+RQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT
Subjt:  RGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT

Query:  IRDELDFEFLGNRSGQPYTVQTNI
        IRDELDFEFLGNRSGQPYTVQTNI
Subjt:  IRDELDFEFLGNRSGQPYTVQTNI

XP_038903673.1 probable xyloglucan endotransglucosylase/hydrolase protein 6 [Benincasa hispida]6.63e-7291.27Show/hide
Query:  GLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDT
        GL  F+ IGL V CM  VA SI VSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFAS+RQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDT
Subjt:  GLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDT

Query:  DTIRDELDFEFLGNRSGQPYTVQTNI
        DTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  DTIRDELDFEFLGNRSGQPYTVQTNI

TrEMBL top hitse value%identityAlignment
A0A0A0LT47 Xyloglucan endotransglucosylase/hydrolase2.48e-84100Show/hide
Query:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
        MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
Subjt:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS

Query:  DTDTIRDELDFEFLGNRSGQPYTVQTNI
        DTDTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  DTDTIRDELDFEFLGNRSGQPYTVQTNI

A0A1S3C963 Xyloglucan endotransglucosylase/hydrolase4.92e-7592.37Show/hide
Query:  MKGLRGFDVIGLFVI--CMYVVALS-IVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFY
        MKGLR  +VIGLFVI   +YVVAL  +VVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFY
Subjt:  MKGLRGFDVIGLFVI--CMYVVALS-IVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFY

Query:  MNSDTDTIRDELDFEFLGNRSGQPYTVQTNI
        MNSDTDTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  MNSDTDTIRDELDFEFLGNRSGQPYTVQTNI

A0A6J1FP46 Xyloglucan endotransglucosylase/hydrolase3.21e-7290.32Show/hide
Query:  RGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT
        R F+ +G  V+C+ VVALSI VSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQ+SGCGFAS+RQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT
Subjt:  RGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT

Query:  IRDELDFEFLGNRSGQPYTVQTNI
        IRDELDFEFLGNRSGQPYTVQTNI
Subjt:  IRDELDFEFLGNRSGQPYTVQTNI

A0A6J1KKU5 Xyloglucan endotransglucosylase/hydrolase3.21e-7290.32Show/hide
Query:  RGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT
        R F+ +G  V+C+ VVALSI VSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQ+SGCGFAS+RQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT
Subjt:  RGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDT

Query:  IRDELDFEFLGNRSGQPYTVQTNI
        IRDELDFEFLGNRSGQPYTVQTNI
Subjt:  IRDELDFEFLGNRSGQPYTVQTNI

N0DX37 Xyloglucan endotransglycosylase (Fragment)8.27e-85100Show/hide
Query:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
        MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS
Subjt:  MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNS

Query:  DTDTIRDELDFEFLGNRSGQPYTVQTNI
        DTDTIRDELDFEFLGNRSGQPYTVQTNI
Subjt:  DTDTIRDELDFEFLGNRSGQPYTVQTNI

SwissProt top hitse value%identityAlignment
P93349 Probable xyloglucan endotransglucosylase/hydrolase protein1.6e-2757.29Show/hide
Query:  FLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYTVQTNI
        F +++  +WA +H++ L GG  + LVLD+SSG GF S++ YLFG  SMK+KLV GDSAG VTAFY++S+ +   DE+DFEFLGNR+GQPY +QTN+
Subjt:  FLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYTVQTNI

Q41542 Probable xyloglucan endotransglucosylase/hydrolase2.3e-2657.29Show/hide
Query:  FLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYTVQTNI
        F +++  TWA +H+  ++GGR +QL LD+++G GF +R  YLFG  SM IKLV GDSAGTVTAFY++S  ++  DE+DFEFLGNR+GQPY +QTN+
Subjt:  FLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYTVQTNI

Q41638 Xyloglucan endotransglucosylase/hydrolase protein A6.0e-2752.94Show/hide
Query:  CMYVVAL-SIVVSGRPAT-----FLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDEL
        C+ +++L S   +  P T     F  ++  TWA +H++ L+GG  IQL LD+ +G GF S+  YLFG  SM IKLVPGDSAGTVTAFY++S T+   DE+
Subjt:  CMYVVAL-SIVVSGRPAT-----FLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDEL

Query:  DFEFLGNRSGQPYTVQTNI
        DFEFLGNR+GQPY +QTN+
Subjt:  DFEFLGNRSGQPYTVQTNI

Q8LER3 Probable xyloglucan endotransglucosylase/hydrolase protein 79.9e-4673.68Show/hide
Query:  ICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFL
        +C++  AL   V  RPA F +DFR+ W+D H+ Q+DGGR IQL LD SSGCGFAS++QYLFG+VSMKIKL+PGDSAGTVTAFYMNSDTD++RDELDFEFL
Subjt:  ICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFL

Query:  GNRSGQPYTVQTNI
        GNRSGQPYTVQTN+
Subjt:  GNRSGQPYTVQTNI

Q8LF99 Probable xyloglucan endotransglucosylase/hydrolase protein 65.8e-4670Show/hide
Query:  GLFVICMY--VVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDE
        G   +C++  +  + I VS RPATF+EDF+  W+++H+RQ++ G+ IQLVLDQS+GCGFAS+R+YLFG+VSMKIKL+PGDSAGTVTAFYMNSDT T+RDE
Subjt:  GLFVICMY--VVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDE

Query:  LDFEFLGNRSGQPYTVQTNI
        LDFEFLGNRSGQPY+VQTNI
Subjt:  LDFEFLGNRSGQPYTVQTNI

Arabidopsis top hitse value%identityAlignment
AT4G25820.1 xyloglucan endotransglucosylase/hydrolase 141.4e-2650Show/hide
Query:  VVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYTV
        VV+     F E F +TW +      + G+ +   LD+ SG GF S+++YLFGK+ MK+KLV G+SAGTVTA+Y++S   T  DE+DFEFLGNR+G PYT+
Subjt:  VVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYTV

Query:  QTNI
         TN+
Subjt:  QTNI

AT4G37800.1 xyloglucan endotransglucosylase/hydrolase 77.0e-4773.68Show/hide
Query:  ICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFL
        +C++  AL   V  RPA F +DFR+ W+D H+ Q+DGGR IQL LD SSGCGFAS++QYLFG+VSMKIKL+PGDSAGTVTAFYMNSDTD++RDELDFEFL
Subjt:  ICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFL

Query:  GNRSGQPYTVQTNI
        GNRSGQPYTVQTN+
Subjt:  GNRSGQPYTVQTNI

AT5G13870.1 xyloglucan endotransglucosylase/hydrolase 52.1e-2749.17Show/hide
Query:  ICMYVVALSIVVSGRP------ATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDE
        +C+  + L+ V  G P        F  ++  TWA +H++ L+GG  + LVLD+ +G GF S+  YLFG  SM IK+V GDSAGTVTAFY++S  ++  DE
Subjt:  ICMYVVALSIVVSGRP------ATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDE

Query:  LDFEFLGNRSGQPYTVQTNI
        +DFEFLGNR+GQPY +QTN+
Subjt:  LDFEFLGNRSGQPYTVQTNI

AT5G57560.1 Xyloglucan endotransglucosylase/hydrolase family protein8.0e-2753.33Show/hide
Query:  IVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYT
        I+ S   A F  D  +TW D   +  + G  + L LD+SSG GF S+ +YLFGKVSM++KLVPG+SAGTVT  Y+ S   T  DE+DFEFLGN SG+PYT
Subjt:  IVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELDFEFLGNRSGQPYT

Query:  VQTNI
        + TN+
Subjt:  VQTNI

AT5G65730.1 xyloglucan endotransglucosylase/hydrolase 64.1e-4770Show/hide
Query:  GLFVICMY--VVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDE
        G   +C++  +  + I VS RPATF+EDF+  W+++H+RQ++ G+ IQLVLDQS+GCGFAS+R+YLFG+VSMKIKL+PGDSAGTVTAFYMNSDT T+RDE
Subjt:  GLFVICMY--VVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDE

Query:  LDFEFLGNRSGQPYTVQTNI
        LDFEFLGNRSGQPY+VQTNI
Subjt:  LDFEFLGNRSGQPYTVQTNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGACTGAGAGGTTTCGATGTCATTGGTTTATTCGTAATTTGCATGTATGTTGTTGCATTGTCCATTGTTGTTTCAGGACGGCCAGCCACTTTTCTTGAGGATTT
TAGGGTCACTTGGGCGGATAACCATGTAAGGCAACTTGATGGTGGAAGGGGAATACAACTTGTTCTCGACCAAAGTTCTGGCTGTGGGTTTGCGTCGAGGCGGCAATACT
TATTTGGAAAAGTGAGCATGAAAATAAAGTTGGTTCCTGGCGACTCGGCAGGAACAGTGACTGCATTTTACATGAACTCAGACACGGACACAATACGGGATGAATTAGAC
TTTGAGTTCTTGGGAAATAGGAGTGGACAACCATACACAGTTCAAACTAATATA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGACTGAGAGGTTTCGATGTCATTGGTTTATTCGTAATTTGCATGTATGTTGTTGCATTGTCCATTGTTGTTTCAGGACGGCCAGCCACTTTTCTTGAGGATTT
TAGGGTCACTTGGGCGGATAACCATGTAAGGCAACTTGATGGTGGAAGGGGAATACAACTTGTTCTCGACCAAAGTTCTGGCTGTGGGTTTGCGTCGAGGCGGCAATACT
TATTTGGAAAAGTGAGCATGAAAATAAAGTTGGTTCCTGGCGACTCGGCAGGAACAGTGACTGCATTTTACATGAACTCAGACACGGACACAATACGGGATGAATTAGAC
TTTGAGTTCTTGGGAAATAGGAGTGGACAACCATACACAGTTCAAACTAATATA
Protein sequenceShow/hide protein sequence
MKGLRGFDVIGLFVICMYVVALSIVVSGRPATFLEDFRVTWADNHVRQLDGGRGIQLVLDQSSGCGFASRRQYLFGKVSMKIKLVPGDSAGTVTAFYMNSDTDTIRDELD
FEFLGNRSGQPYTVQTNI