; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6558 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6558
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionBED-type domain-containing protein
Genome locationctg1451:71117..71677
RNA-Seq ExpressionCucsat.G6558
SyntenyCucsat.G6558
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008465850.1 PREDICTED: uncharacterized protein LOC103503443 [Cucumis melo]7.92e-10894.3Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAA YYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSK+KRA
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        EALFGQPLAIRQR+KISPVEWWDNFGQSTPNLQKFA+RILGLTCSAS CERNWSVFEQ
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

XP_011660188.2 uncharacterized protein LOC105436349 [Cucumis sativus]3.08e-10796.2Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPN QEDDEIVNGLYSCITKMVASLEVQDKIL ELSKYKRA
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        +ALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLT SASGC RNWSV EQ
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

XP_016900525.1 PREDICTED: uncharacterized protein LOC103490621 [Cucumis melo]1.39e-10996.86Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL+VQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASG ERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

XP_031737060.1 uncharacterized protein LOC101204843 [Cucumis sativus]3.29e-10799.37Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLN SFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

XP_031739008.1 uncharacterized protein LOC116402801 [Cucumis sativus]7.10e-10799.37Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLN SFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

TrEMBL top hitse value%identityAlignment
A0A1S3CR94 uncharacterized protein LOC1035034433.83e-10894.3Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAA YYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSK+KRA
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        EALFGQPLAIRQR+KISPVEWWDNFGQSTPNLQKFA+RILGLTCSAS CERNWSVFEQ
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

A0A1S4DXT8 uncharacterized protein LOC1034906216.75e-11096.86Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL+VQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASG ERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

A0A5A7TY62 BED-type domain-containing protein2.21e-10596.86Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

A0A5A7U370 Uncharacterized protein8.50e-10696.86Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL++QDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

A0A5A7V8P5 BED-type domain-containing protein1.57e-10597.48Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIID+RWELQLHRPLHAAGYYLNPSFYYSNP+IQEDDEIVNGLYSCITKMVASL+VQDKILAELSKYKR
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ
        AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFA+RILGLTCSASGCERNWSVFEQ
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G22220.1 hAT transposon superfamily5.5e-3345.96Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK
        MGY+Y AM RAKEAI  +  + EE Y   + IID+ W   L +PL+AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++ +++ YK
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK

Query:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQ
         A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S G  RN +   Q
Subjt:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQ

AT3G22220.2 hAT transposon superfamily5.5e-3345.96Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK
        MGY+Y AM RAKEAI  +  + EE Y   + IID+ W   L +PL+AAG+YLNP F+YS   I E+   EI   +  CI K+V  + +QD ++ +++ YK
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQED--DEIVNGLYSCITKMVASLEVQDKILAELSKYK

Query:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQ
         A  +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S G  RN +   Q
Subjt:  RAEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERNWSVFEQ

AT4G15020.1 hAT transposon superfamily7.6e-3547.71Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGY+Y A+ RAK+AI K+   N E Y   + IID+ WE Q H PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ YK A
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERN
          +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S  C RN
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERN

AT4G15020.2 hAT transposon superfamily7.6e-3547.71Show/hide
Query:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA
        MGY+Y A+ RAK+AI K+   N E Y   + IID+ WE Q H PL AAG++LNP  +Y N N +   E++  +  CI ++V   ++QDKI+ EL+ YK A
Subjt:  MGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRA

Query:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERN
          +FG+ LAIR RD + P EWW  +G+S  NL +FA+RIL  TCS+S  C RN
Subjt:  EALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSAS-GCERN

AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related7.1e-5759.49Show/hide
Query:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR
        PMGYIY AMD+AKE I KSF   EE YK  F IID+RW++QLHRPLHAAGYYLNP F+Y  P+    +E++ G   C+ ++V  +E QDKI+ EL  +K+
Subjt:  PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKR

Query:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFE
        A  LFG P+AIR R K+SP EWW  +G STPNLQ FA+++L LTCSA+GCERNW VF+
Subjt:  AEALFGQPLAIRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTATGGGATATATTTATGAGGCCATGGATAGAGCTAAGGAAGCTATTGCTAAATCCTTTAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAG
ATGGGAGCTTCAGTTGCATCGTCCTCTGCATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGAC
TCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCA
ATCAGACAAAGGGACAAAATATCTCCAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGC
TTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAG
mRNA sequenceShow/hide mRNA sequence
CCTATGGGATATATTTATGAGGCCATGGATAGAGCTAAGGAAGCTATTGCTAAATCCTTTAATAATAATGAAGAAAAATACAAGGACATTTTCACCATAATTGATAAAAG
ATGGGAGCTTCAGTTGCATCGTCCTCTGCATGCAGCGGGGTATTATTTAAACCCGTCATTCTATTATTCGAATCCTAACATCCAGGAGGATGATGAAATAGTTAATGGAC
TCTACTCATGCATAACGAAAATGGTTGCTTCATTGGAAGTACAAGACAAAATACTTGCAGAACTAAGCAAGTATAAGAGGGCTGAAGCATTATTCGGACAACCTTTAGCA
ATCAGACAAAGGGACAAAATATCTCCAGTGGAATGGTGGGATAATTTTGGACAATCAACTCCAAACTTGCAAAAGTTTGCTGTGAGAATTTTAGGTCTTACTTGTAGTGC
TTCTGGATGCGAGCGTAATTGGAGTGTGTTTGAACAG
Protein sequenceShow/hide protein sequence
PMGYIYEAMDRAKEAIAKSFNNNEEKYKDIFTIIDKRWELQLHRPLHAAGYYLNPSFYYSNPNIQEDDEIVNGLYSCITKMVASLEVQDKILAELSKYKRAEALFGQPLA
IRQRDKISPVEWWDNFGQSTPNLQKFAVRILGLTCSASGCERNWSVFEQ