; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6565 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6565
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionHistone H2B
Genome locationctg1451:190690..196999
RNA-Seq ExpressionCucsat.G6565
SyntenyCucsat.G6565
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR000558 - Histone H2B
IPR007125 - Histone H2A/H2B/H3
IPR009072 - Histone-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7152864.1 hypothetical protein RHSIM_Rhsim01G0225200 [Rhododendron simsii]7.69e-4465.35Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQ
        KKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLP E         T    +  R K+
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQ

Query:  NLYLSRWILMVPGDFLEQIRVTQGLVP
         L        +P D  + +R  +  VP
Subjt:  NLYLSRWILMVPGDFLEQIRVTQGLVP

RDX60372.1 Histone H2B.4, partial [Mucuna pruriens]5.09e-4476.92Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQ
        KKR KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLP E         T   +Q G  K+
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQ

Query:  NLYL
         + L
Subjt:  NLYL

XP_004139453.1 histone H2B.7 [Cucumis sativus]9.74e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

XP_016903018.1 PREDICTED: LOW QUALITY PROTEIN: histone H2B.7-like [Cucumis melo]9.74e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

XP_022964661.1 histone H2B.7-like [Cucurbita moschata]9.74e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

TrEMBL top hitse value%identityAlignment
A0A0A0LST8 Histone H2B4.71e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

A0A0A0LV55 Histone H2B4.71e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

A0A371E2V8 Histone H2B (Fragment)2.47e-4476.92Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQ
        KKR KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLP E         T   +Q G  K+
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQ

Query:  NLYL
         + L
Subjt:  NLYL

A0A5A7SNI2 Histone H2B4.71e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

A0A6J1I3M0 Histone H2B4.71e-4498.73Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

SwissProt top hitse value%identityAlignment
O49118 Histone H2B1.2e-3496.2Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKRAKKSIETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

Q1S9I9 Probable histone H2B.11.6e-3494.94Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

Q1SU99 Probable histone H2B.32.7e-3493.67Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR KKS+ETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

Q1SWQ1 Probable histone H2B.24.6e-3493.67Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR+KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESS+LARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

Q9LQQ4 Histone H2B.11.6e-3494.94Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR+KK++ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

Arabidopsis top hitse value%identityAlignment
AT1G07790.1 Histone superfamily protein1.1e-3594.94Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR+KK++ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

AT2G28720.1 Histone superfamily protein4.3e-3594.94Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR KKS ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

AT2G37470.1 Histone superfamily protein4.3e-3592.41Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KK++KKS+ETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

AT5G22880.1 histone B27.3e-3593.67Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KKR+KK++ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESSKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE

AT5G59910.1 Histone superfamily protein9.6e-3593.67Show/hide
Query:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE
        KK  KKS+ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SKLARYNKKPTITSREIQTAVRLVLP E
Subjt:  KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAA
CAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCC
TTGTTCTTCCTGATGAGAATGGTTGGGAAAGAGCCGACGCCACCACACCTCCAAGGTTACAGGGAGGCAGGACCAAGCAAAACCTTTACCTTTCAAGGTGGATTCTAATG
GTTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTTCTCCTTGTTACTATATCAACAAGTAAAGATTTCACTCTTTTTCTCCTGTA
TTCACATTTGAACAATGCATAG
mRNA sequenceShow/hide mRNA sequence
AAGAAGAGAGCCAAGAAGAGCATTGAGACTTACAAGATCTACATCTTCAAAGTCCTCAAGCAAGTTCATCCCGACATCGGAATCTCCAGCAAGGCAATGGGGATTATGAA
CAGCTTCATCAACGACATTTTCGAGAAGCTCGCTCAGGAATCCTCAAAGCTCGCTCGCTACAACAAGAAGCCGACTATCACCTCTCGGGAGATCCAAACGGCGGTGCGCC
TTGTTCTTCCTGATGAGAATGGTTGGGAAAGAGCCGACGCCACCACACCTCCAAGGTTACAGGGAGGCAGGACCAAGCAAAACCTTTACCTTTCAAGGTGGATTCTAATG
GTTCCTGGGGATTTTCTGGAGCAAATAAGGGTAACCCAAGGATTAGTGCCAAGTTTATTTCTCCTTGTTACTATATCAACAAGTAAAGATTTCACTCTTTTTCTCCTGTA
TTCACATTTGAACAATGCATAG
Protein sequenceShow/hide protein sequence
KKRAKKSIETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPDENGWERADATTPPRLQGGRTKQNLYLSRWILM
VPGDFLEQIRVTQGLVPSLFLLVTISTSKDFTLFLLYSHLNNA