CuGenDBv2

Gene ID	Cucsat.G6578
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Cyclin-dependent kinases regulatory subunit
Genome location	ctg1451:190352..191558
RNA-Seq Expression	Cucsat.G6578
Synteny	Cucsat.G6578
Gene Ontology terms	GO:0007346 - regulation of mitotic cell cycle (biological process) GO:0045737 - positive regulation of cyclin-dependent protein serine/threonine kinase activity (biological process) GO:0051301 - cell division (biological process) GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0016301 - kinase activity (molecular function) GO:0019901 - protein kinase binding (molecular function) GO:0042393 - histone binding (molecular function) GO:0043130 - ubiquitin binding (molecular function) GO:0061575 - cyclin-dependent protein serine/threonine kinase activator activity (molecular function)
InterPro domains	IPR000789 - Cyclin-dependent kinase, regulatory subunit IPR036858 - Cyclin-dependent kinase, regulatory subunit superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

GAV69670.1 CKS domain-containing protein [Cephalotus follicularis]

1.38e-41

97.18

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQ +LAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

XP_011654109.1 cyclin-dependent kinases regulatory subunit 1 [Cucumis sativus]

8.40e-43

100

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

XP_016903011.1 PREDICTED: cyclin-dependent kinases regulatory subunit 1 isoform X1 [Cucumis melo]

4.88e-42

100

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

XP_022964884.1 cyclin-dependent kinases regulatory subunit 1-like [Cucurbita moschata]

2.40e-42

98.59

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

XP_038894383.1 cyclin-dependent kinases regulatory subunit 1 [Benincasa hispida]

6.84e-42

98.59

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY04 Cyclin-dependent kinases regulatory subunit

4.06e-43

100

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

A0A1S4E453 Cyclin-dependent kinases regulatory subunit

2.36e-42

100

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
        RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILA

A0A1S4E4W6 Cyclin-dependent kinases regulatory subunit

4.06e-43

100

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

A0A6J1HM34 Cyclin-dependent kinases regulatory subunit

1.16e-42

98.59

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

A0A6J1I3M7 Cyclin-dependent kinases regulatory subunit

1.16e-42

98.59

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
        RHVVLTP+VAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

SwissProt top hits

e value

%identity

Alignment

A2XCH8 Cyclin-dependent kinases regulatory subunit 1

1.5e-28

93.75

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        RHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

O23249 Cyclin-dependent kinases regulatory subunit 1

4.4e-31

91.3

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL
        RHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL

P55933 Probable cyclin-dependent kinases regulatory subunit

7.7e-20

78.85

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR
        RHV+L P+VAK +PKNRLLSE EWR +GVQQS+GWVHYA+HRPEPHI+LFRR
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRR

Q6PS57 Cyclin-dependent kinases regulatory subunit 1

1.5e-28

93.75

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA
        RHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLN+QQQQE  A
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQA

Q9SJJ5 Cyclin-dependent kinases regulatory subunit 2

3.8e-27

88.89

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        RHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ

Arabidopsis top hits

e value

%identity

Alignment

AT2G27960.1 cyclin-dependent kinase-subunit 1

3.1e-32

91.3

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL
        RHVVL PEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYA+HRPEPHIMLFRRPLNYQQQQENQAQ  ++
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQIL

AT2G27970.1 CDK-subunit 2

2.7e-28

88.89

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Query:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ
        RHVVL PEVAKLLPKNR+LSE+EWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQ+ + Q
Subjt:  RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQ

Sequences

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CDS sequence

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TCCCAAAATTCAACCCACTATTTCAACTTCATCGTCTCACTTTCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCGCTCCTCCAATTTCTGGAATCCATTTCTCC
AATTCCTTTCCATTTTCTTCAGATCAAAACAAGCCCGACCGACTTTTTTCTCTCTTGTTCGGTGCGATGGGTCAGATTCAGTACTCTGAGAAGTACTTTGATGATATCTA
TGAGTATAGGTCTGAGATTTCTCTTCGATGGTTTTTTTCATCGACATGGTTTGATTCTCATGGGGTTTGTTTTTTTTTTTCTTTTTTTCTTTTTTGTTGATGTTTGTTGT
AGGCATGTGGTGCTTACTCCTGAAGTGGCGAAACTTCTCCCCAAGAATCGCCTTCTTTCTGAAAATGAATGGAGAGCGATCGGTGTTCAACAAAGCCGTGGATGGGTTCA
TTATGCAATTCATCGCCCAGAGCCACACATAATGTTGTTCAGAAGGCCACTCAACTATCAACAGCAGCAAGAGAATCAAGCACAACAGCAGATTTTGGCCAAGTAA

mRNA sequence

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Protein sequence

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SQNSTHYFNFIVSLSPSSSSSSSSSSSLLQFLESISPIPFHFLQIKTSPTDFFLSCSVRWVRFSTLRSTLMISMSIGLRFLFDGFFHRHGLILMGFVFFFLFFFFVDVCC
RHVVLTPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNYQQQQENQAQQQILAK

Cucsat.G6578 (gene) of Cucumber (B10) v3 genome