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Cucsat.G6613 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6613
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionprotein SINE3
Genome locationctg1456:72518..73647
RNA-Seq ExpressionCucsat.G6613
SyntenyCucsat.G6613
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575120.1 hypothetical protein SDJN03_25759, partial [Cucurbita argyrosperma subsp. sororia]5.16e-8869.37Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIH-----SSFLQGVNPEFSACCDTSLFPDLSSSSV
        MEKRMKD QTPQR+Q  NR SRKP KIAKC +AT  SLS+DKI   SK++ SPIS VSD+NQI DI       S+L  VNP  SACC +SL PDLS SSV
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIH-----SSFLQGVNPEFSACCDTSLFPDLSSSSV

Query:  VSFDNELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWII
        V+FDN  LDKV  +FSGSND++E  AGSV AEIAVN + RALTQVLQSTDVDHQ+KKLIDAS+RII DDFLAIPQ RD I QLISAK  VL + +FLWII
Subjt:  VSFDNELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWII

Query:  VLAKAFFVGSGVESSFTGPLPT
        VLA AFF  S V+SSF GPLPT
Subjt:  VLAKAFFVGSGVESSFTGPLPT

XP_008458341.1 PREDICTED: uncharacterized protein LOC103497781 [Cucumis melo]3.00e-12187.56Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        MEKRMKDHQTPQREQTTNR SRKPQKIAKC +A+  SLSEDKIHSISKENSSPIS VSD+NQISDI SSFLQGVNPEFSACCDTSLFPDLS SSVVSFDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
        ELLDKVS DFSGSND+NEASAGS+EAEIAVN +RRALTQVL STDVDHQSKKLIDASMRII DDFLAIPQ+RD+IAQLIS K +VL +CVFLWI+VLA A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FFVGSGV+SSFTGPLPT
Subjt:  FFVGSGVESSFTGPLPT

XP_011657295.2 uncharacterized protein LOC105435846 [Cucumis sativus]7.89e-162100Show/hide
Query:  MVMVHNICWRQSLISELPQSFPAISRMEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGV
        MVMVHNICWRQSLISELPQSFPAISRMEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGV
Subjt:  MVMVHNICWRQSLISELPQSFPAISRMEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGV

Query:  NPEFSACCDTSLFPDLSSSSVVSFDNELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQ
        NPEFSACCDTSLFPDLSSSSVVSFDNELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQ
Subjt:  NPEFSACCDTSLFPDLSSSSVVSFDNELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQ

Query:  IAQLISAKYHVLCVCVFLWIIVLAKAFFVGSGVESSFTGPLPT
        IAQLISAKYHVLCVCVFLWIIVLAKAFFVGSGVESSFTGPLPT
Subjt:  IAQLISAKYHVLCVCVFLWIIVLAKAFFVGSGVESSFTGPLPT

XP_022959315.1 uncharacterized protein LOC111460327 isoform X1 [Cucurbita moschata]6.18e-8869.59Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        ME+RMKD QTPQR+Q  NR SRKP KIAKC +AT  SLS+DKI   SK++ S IS VSD+NQI DI  SFL  VNP  SACC +SL PDLS SSVV+FDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
          LDKV  +FSGSND++E  AGSV AEIAV+ + RALTQVLQSTDVDHQ+KKLIDAS+RII DDFLAIPQ RD I Q+ISAK  VL + +FLWIIVLA A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FF  S V+SSF GPLPT
Subjt:  FFVGSGVESSFTGPLPT

XP_038876305.1 uncharacterized protein LOC120068561 [Benincasa hispida]5.00e-10678.8Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        MEK+MKD+QTPQR+QT NR SRKPQKIAKC +AT  SLS+DKI  ISKE+ SPIS V+D+NQI DI S+FLQGVNP FSA C+TSLF DLS SSVVSFDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
        E LDKV  +FSGSND++EASAGSVE +IAVN +RRALTQVLQSTDVDHQSKKLIDASM II DDFLAIPQ+RDQIAQLIS K HVL +CVFLWIIVLA A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FF+GSGV+SSF GPLPT
Subjt:  FFVGSGVESSFTGPLPT

TrEMBL top hitse value%identityAlignment
A0A0A0KI59 Uncharacterized protein7.99e-142100Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
        ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FFVGSGVESSFTGPLPT
Subjt:  FFVGSGVESSFTGPLPT

A0A1S4E1Y8 uncharacterized protein LOC1034977811.45e-12187.56Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        MEKRMKDHQTPQREQTTNR SRKPQKIAKC +A+  SLSEDKIHSISKENSSPIS VSD+NQISDI SSFLQGVNPEFSACCDTSLFPDLS SSVVSFDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
        ELLDKVS DFSGSND+NEASAGS+EAEIAVN +RRALTQVL STDVDHQSKKLIDASMRII DDFLAIPQ+RD+IAQLIS K +VL +CVFLWI+VLA A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FFVGSGV+SSFTGPLPT
Subjt:  FFVGSGVESSFTGPLPT

A0A5D3BTA3 Uncharacterized protein1.45e-12187.56Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        MEKRMKDHQTPQREQTTNR SRKPQKIAKC +A+  SLSEDKIHSISKENSSPIS VSD+NQISDI SSFLQGVNPEFSACCDTSLFPDLS SSVVSFDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
        ELLDKVS DFSGSND+NEASAGS+EAEIAVN +RRALTQVL STDVDHQSKKLIDASMRII DDFLAIPQ+RD+IAQLIS K +VL +CVFLWI+VLA A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FFVGSGV+SSFTGPLPT
Subjt:  FFVGSGVESSFTGPLPT

A0A6J1EQ83 uncharacterized protein LOC1114368224.91e-8767.28Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        MEKR K++QTP R+Q  NR S+KP KI K  +AT  S  +DKI  I KE+ SPIS VS+++QI DI SSFLQ VNP  S  C++SLFP+LS SSVV+FDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
        + LDKV  +F GSN+++EASAGSVEAEIAVN++RRAL+QVLQSTDVDHQSKKLIDAS+RII D+FLAIPQ+RD I +LIS+K HVL + +FLWIIVL  A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FF GSGVE+ F GPLPT
Subjt:  FFVGSGVESSFTGPLPT

A0A6J1H5Y6 uncharacterized protein LOC111460327 isoform X12.99e-8869.59Show/hide
Query:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN
        ME+RMKD QTPQR+Q  NR SRKP KIAKC +AT  SLS+DKI   SK++ S IS VSD+NQI DI  SFL  VNP  SACC +SL PDLS SSVV+FDN
Subjt:  MEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSACCDTSLFPDLSSSSVVSFDN

Query:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA
          LDKV  +FSGSND++E  AGSV AEIAV+ + RALTQVLQSTDVDHQ+KKLIDAS+RII DDFLAIPQ RD I Q+ISAK  VL + +FLWIIVLA A
Subjt:  ELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCVFLWIIVLAKA

Query:  FFVGSGVESSFTGPLPT
        FF  S V+SSF GPLPT
Subjt:  FFVGSGVESSFTGPLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATGTGTTTCGTATGGTAATGGTGCACAATATCTGTTGGCGCCAAAGCTTAATTTCAGAACTTCCCCAAAGTTTTCCCGCGATTTCAAGAATGGAGAAAAGGATGAAAGA
CCATCAAACTCCACAGAGAGAACAAACCACAAATCGTACATCAAGGAAGCCTCAGAAGATCGCCAAATGCTTCAGTGCCACATTGTTATCACTTTCCGAAGATAAAATCC
ACTCAATTTCTAAAGAAAACTCCTCTCCCATCTCTGCTGTCTCAGACCTCAATCAGATTTCAGATATCCACAGTAGTTTCTTGCAAGGTGTTAATCCGGAATTTTCTGCT
TGCTGCGATACCTCGCTTTTCCCCGATCTTTCTTCATCTTCAGTCGTCAGTTTTGACAATGAACTGCTTGACAAGGTTTCAGCTGATTTTTCTGGATCTAATGATATAAA
TGAAGCAAGCGCGGGCTCAGTAGAGGCAGAGATTGCTGTGAATTTTATACGGCGTGCTTTAACTCAAGTCCTGCAATCGACGGATGTTGATCATCAGTCGAAGAAGCTTA
TAGATGCATCTATGCGTATCATTGCGGACGACTTCCTTGCTATACCTCAACAGCGAGATCAGATTGCTCAACTTATTTCTGCCAAATATCATGTTCTCTGTGTGTGTGTA
TTCCTGTGGATCATCGTCTTGGCTAAAGCTTTCTTTGTCGGTTCGGGAGTCGAGAGCTCTTTCACTGGACCATTGCCAACTTAA
mRNA sequenceShow/hide mRNA sequence
TATGTGTTTCGTATGGTAATGGTGCACAATATCTGTTGGCGCCAAAGCTTAATTTCAGAACTTCCCCAAAGTTTTCCCGCGATTTCAAGAATGGAGAAAAGGATGAAAGA
CCATCAAACTCCACAGAGAGAACAAACCACAAATCGTACATCAAGGAAGCCTCAGAAGATCGCCAAATGCTTCAGTGCCACATTGTTATCACTTTCCGAAGATAAAATCC
ACTCAATTTCTAAAGAAAACTCCTCTCCCATCTCTGCTGTCTCAGACCTCAATCAGATTTCAGATATCCACAGTAGTTTCTTGCAAGGTGTTAATCCGGAATTTTCTGCT
TGCTGCGATACCTCGCTTTTCCCCGATCTTTCTTCATCTTCAGTCGTCAGTTTTGACAATGAACTGCTTGACAAGGTTTCAGCTGATTTTTCTGGATCTAATGATATAAA
TGAAGCAAGCGCGGGCTCAGTAGAGGCAGAGATTGCTGTGAATTTTATACGGCGTGCTTTAACTCAAGTCCTGCAATCGACGGATGTTGATCATCAGTCGAAGAAGCTTA
TAGATGCATCTATGCGTATCATTGCGGACGACTTCCTTGCTATACCTCAACAGCGAGATCAGATTGCTCAACTTATTTCTGCCAAATATCATGTTCTCTGTGTGTGTGTA
TTCCTGTGGATCATCGTCTTGGCTAAAGCTTTCTTTGTCGGTTCGGGAGTCGAGAGCTCTTTCACTGGACCATTGCCAACTTAA
Protein sequenceShow/hide protein sequence
YVFRMVMVHNICWRQSLISELPQSFPAISRMEKRMKDHQTPQREQTTNRTSRKPQKIAKCFSATLLSLSEDKIHSISKENSSPISAVSDLNQISDIHSSFLQGVNPEFSA
CCDTSLFPDLSSSSVVSFDNELLDKVSADFSGSNDINEASAGSVEAEIAVNFIRRALTQVLQSTDVDHQSKKLIDASMRIIADDFLAIPQQRDQIAQLISAKYHVLCVCV
FLWIIVLAKAFFVGSGVESSFTGPLPT