; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6757 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6757
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionRibosome biogenesis protein BRX1-like
Genome locationctg1502:1660151..1661875
RNA-Seq ExpressionCucsat.G6757
SyntenyCucsat.G6757
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR026532 - Ribosome biogenesis protein BRX1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450669.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo]2.31e-8389.44Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

XP_011659901.2 ribosome biogenesis protein BRX1 homolog 1 [Cucumis sativus]2.49e-9096.45Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNA
        ELVELKGCSSSLFFECRKHKDLYLCMAKCPSG SVKFLVNA
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNA

XP_022159792.1 ribosome biogenesis protein BRX1 homolog 1-like [Momordica charantia]9.62e-8389.44Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

XP_031736511.1 ribosome biogenesis protein BRX1 homolog 1-like isoform X1 [Cucumis sativus]9.89e-10197.96Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVF NKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRS+KGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAICFLYC
        ELVELKGCSSSLFFECRKHKDLYLCMAKCPSG SVKFLVNAICFLYC
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAICFLYC

XP_031744340.1 ribosome biogenesis protein BRX1 homolog 1-like [Cucumis sativus]3.45e-10198.64Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVF NKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAICFLYC
        ELVELKGCSSSLFFECRKHKDLYLCMAKCPSG SVKFLVNAICFLYC
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAICFLYC

TrEMBL top hitse value%identityAlignment
A0A1S3BQS3 ribosome biogenesis protein BRX1-like1.12e-8389.44Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

A0A5D3CG95 Ribosome biogenesis protein BRX1-like1.12e-8389.44Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE++PTVSVKKD++A ERPKRTLMGWKDK+VTK+SE GSDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

A0A6J1E0T2 ribosome biogenesis protein BRX1 homolog 1-like4.66e-8389.44Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        MAKKRKHSE+L +V+VKKD DAPERPKRTLMGWKDK+V KESE GSDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

A0A6J1EW75 ribosome biogenesis protein BRX1 homolog 1-like4.86e-8085.92Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M KKRKHSE+LP VSVKKD+ APERPKRTL GWKDK+V KE+E GSDHAVF NKEKVL+TCSRRINFRY HLMLN+VSLLPHCKKDNKVE RSSKGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSS LFFECRKHKDLYL M+KCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

A0A6J1HZ18 ribosome biogenesis protein BRX1 homolog 1-like1.85e-7986.62Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M KKRKHSE+LP VSVKKDD APER KRTL GWKDK+VT +SE  SDHAVF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKDNKVE RS+KGATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        ELVELKGCSSSLFFECRKHKDLYL MAKCPSG SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

SwissProt top hitse value%identityAlignment
P34524 Ribosome biogenesis protein BRX1 homolog1.0e-1439.25Show/hide
Query:  KKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSV
        K+ T+E+   ++  ++ N+E+VL+ CSR  + R  +LM ++  LLPH K D+K++ + S    LNE+ E+K C+  ++FE RK KD YL M+    G S+
Subjt:  KKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSV

Query:  KFLVNAI
        KFLV+ +
Subjt:  KFLVNAI

Q08235 Ribosome biogenesis protein BRX12.7e-1542.7Show/hide
Query:  FGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLV
        F NK++ L+  SR +N+R+ HL+ ++  LLPH +K+ K++ +      LNE+ EL  C++ LFFE RKH+DLYL ++K P+G ++KF +
Subjt:  FGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLV

Q9C928 Ribosome biogenesis protein BRX1 homolog 23.3e-4565.97Show/hide
Query:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT
        M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F NKEKVL+TCSRRI+FRY  LMLN+VSLLPHCKKD+KVE +SSKGAT
Subjt:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT

Query:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        LNEL+ELK  +S LFFECRKHKDLY+ M K P+G SVKFLV A+
Subjt:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

Q9HGL6 Ribosome biogenesis protein brx13.0e-1445.35Show/hide
Query:  KEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLV
        K+KVL+  SR + +R  HL+ ++VS++PH KKD+K++ +  +   LNEL EL  C++  FFE R+ +DLYL +A+ P+G +VKF V
Subjt:  KEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLV

Q9LE16 Ribosome biogenesis protein BRX1 homolog 15.2e-5171.13Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKD+KVE +SS+GATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        EL+ELKG SS LFFECRKHKDLY+ M K P G SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

Arabidopsis top hitse value%identityAlignment
AT1G52930.1 Ribosomal RNA processing Brix domain protein2.3e-4665.97Show/hide
Query:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT
        M +KRKHSE+     VKK D+ AP+RPKRTL+GWKDK   + E       + F NKEKVL+TCSRRI+FRY  LMLN+VSLLPHCKKD+KVE +SSKGAT
Subjt:  MAKKRKHSESLPTVSVKKDDD-APERPKRTLMGWKDKKVTK-ESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGAT

Query:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        LNEL+ELK  +S LFFECRKHKDLY+ M K P+G SVKFLV A+
Subjt:  LNELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI

AT3G15460.1 Ribosomal RNA processing Brix domain protein3.7e-5271.13Show/hide
Query:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN
        M +KRKHSE++    VK  D APERP+RTL+GWKDKK   E+   +  +VF NKEKVL+TCSRRINFRY HLMLNMVSLLPHCKKD+KVE +SS+GATLN
Subjt:  MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLN

Query:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI
        EL+ELKG SS LFFECRKHKDLY+ M K P G SVKFLVNA+
Subjt:  ELVELKGCSSSLFFECRKHKDLYLCMAKCPSGLSVKFLVNAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCAGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTCATGGGCTGGAAAGACAAAAA
AGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTGGAAATAAAGAAAAGGTTCTCATCACGTGTTCCCGTCGAATCAATTTTAGGTATTGGCATTTGATGT
TGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCC
AGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCTATCTGTGAAGTTTTTAGTTAATGCCATTTGTTTTCTCTATTG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAAGAAGAGGAAGCATAGTGAGTCTTTGCCGACGGTATCAGTTAAGAAGGACGATGATGCTCCGGAGAGACCTAAGCGGACACTCATGGGCTGGAAAGACAAAAA
AGTGACAAAAGAGAGTGAAGTTGGTTCTGATCATGCTGTTTTTGGAAATAAAGAAAAGGTTCTCATCACGTGTTCCCGTCGAATCAATTTTAGGTATTGGCATTTGATGT
TGAATATGGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTTGAGGTCCAGCAAGGGTGCAACACTGAATGAGCTGGTTGAGCTCAAAGGTTGTTCTTCC
AGCCTATTTTTCGAGTGCAGAAAACATAAAGATCTTTATCTATGTATGGCAAAGTGCCCTAGTGGGCTATCTGTGAAGTTTTTAGTTAATGCCATTTGTTTTCTCTATTG
TTGA
Protein sequenceShow/hide protein sequence
MAKKRKHSESLPTVSVKKDDDAPERPKRTLMGWKDKKVTKESEVGSDHAVFGNKEKVLITCSRRINFRYWHLMLNMVSLLPHCKKDNKVELRSSKGATLNELVELKGCSS
SLFFECRKHKDLYLCMAKCPSGLSVKFLVNAICFLYC