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Cucsat.G6787 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6787
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionlight-regulated protein-like
Genome locationctg1517:112527..114639
RNA-Seq ExpressionCucsat.G6787
SyntenyCucsat.G6787
Gene Ontology termsGO:0009507 - chloroplast (cellular component)
InterPro domainsIPR009856 - Light regulated Lir1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACV88397.1 GA-like protein, partial [Cucumis sativus]6.10e-91100Show/hide
Query:  VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEE
        VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEE
Subjt:  VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEE

Query:  IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
        IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
Subjt:  IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
KAA0066931.1 light-regulated protein isoform X2 [Cucumis melo var. makuwa]4.17e-7285.71Show/hide
Query:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS
        AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ 
Subjt:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS

Query:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
        EEIDREYLDYA DSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
KAE8650797.1 hypothetical protein Csa_017474 [Cucumis sativus]2.30e-88100Show/hide
Query:  QAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASS
        QAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASS
Subjt:  QAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASS

Query:  EEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
        EEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
Subjt:  EEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
XP_004145699.2 light-regulated protein, chloroplastic [Cucumis sativus]1.60e-104100Show/hide
Query:  MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFP
        MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFP
Subjt:  MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFP

Query:  EVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
        EVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
Subjt:  EVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
XP_038893926.1 light-regulated protein, chloroplastic-like [Benincasa hispida]1.69e-7284.29Show/hide
Query:  MQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVAS
        MQAVLSIAVP LLPS TLS+N PS FPLI+FSSH SRRS+IKATASVVYD S+VDYSSAISVFPAEACETIGGEAC W NMFPEVR+Q  SLNNQ P  +
Subjt:  MQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVAS

Query:  SEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
         EEIDREYLDYADS+TVFPGEACDDLGGEFCEPEFLN VF
Subjt:  SEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
TrEMBL top hitse value%identityAlignment
A0A0A0L8G9 Uncharacterized protein7.76e-105100Show/hide
Query:  MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFP
        MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFP
Subjt:  MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFP

Query:  EVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
        EVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
Subjt:  EVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
A0A1S3BND3 light-regulated protein isoform X24.41e-7185Show/hide
Query:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS
        AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSR S+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ 
Subjt:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS

Query:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
        EEIDREYLDYA DSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
A0A1S4DXW1 light-regulated protein isoform X33.61e-7185Show/hide
Query:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS
        AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSR S+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ 
Subjt:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS

Query:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
        EEIDREYLDYA DSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
A0A5A7VMP8 Light-regulated protein isoform X22.02e-7285.71Show/hide
Query:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS
        AVLSIAVPSLLPSSTLS++  SHFP ITF S+SSRRS+IKATASVVYDTSVVDYSSAISVFPAEACETIGGEAC W NMFPEVRLQ +  NNQNP VA+ 
Subjt:  AVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNP-VASS

Query:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
        EEIDREYLDYA DSKTVF GEACDDLGGEFCE EFLNGVF
Subjt:  EEIDREYLDYA-DSKTVFPGEACDDLGGEFCEPEFLNGVF
C9E9F1 GA-like protein (Fragment)2.95e-91100Show/hide
Query:  VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEE
        VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEE
Subjt:  VLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEE

Query:  IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
        IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
Subjt:  IDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF
SwissProt top hitse value%identityAlignment
Q03200 Light-regulated protein, chloroplastic4.3e-1954.44Show/hide
Query:  ATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCE
        A A+V  + + VDYSS ISVFP EAC+ IGGEAC  + M+PE +L  ++    +  A++EE+DR+YL Y +  TVFP EACDDLGGEFC+
Subjt:  ATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLNNQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCE
Q96500 Light-regulated protein 1, chloroplastic8.7e-2047.89Show/hide
Query:  MQAVLSIAVPSLLP-SSTLSSNKPSHFPLITFSSHSSRRSSIK-----ATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACGWENMFPEVRLQQASLN
        MQ  L I    LLP  S++SS K +   L+  ++ +SR SS++     +++S+  D + VDY+S+I SVFPAEACE I G AC   +++PEV+L    ++
Subjt:  MQAVLSIAVPSLLP-SSTLSSNKPSHFPLITFSSHSSRRSSIK-----ATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACGWENMFPEVRLQQASLN

Query:  NQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEF
           PVA SE +DREY +Y   KTVF  EACDDLGGEFCEP+F
Subjt:  NQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEF
Arabidopsis top hitse value%identityAlignment
AT3G26740.1 CCR-like6.2e-2147.89Show/hide
Query:  MQAVLSIAVPSLLP-SSTLSSNKPSHFPLITFSSHSSRRSSIK-----ATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACGWENMFPEVRLQQASLN
        MQ  L I    LLP  S++SS K +   L+  ++ +SR SS++     +++S+  D + VDY+S+I SVFPAEACE I G AC   +++PEV+L    ++
Subjt:  MQAVLSIAVPSLLP-SSTLSSNKPSHFPLITFSSHSSRRSSIK-----ATASVVYDTSVVDYSSAI-SVFPAEACETIGGEACGWENMFPEVRLQQASLN

Query:  NQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEF
           PVA SE +DREY +Y   KTVF  EACDDLGGEFCEP+F
Subjt:  NQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCATCCAAATCTCAAAACCTTATTTACAACATATCATCAAAATCACAATGCAGGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTCCCCAGCTCAACACTTTCCAG
TAATAAACCTTCTCACTTCCCTTTGATCACATTTTCTTCTCACTCATCCCGTCGCTCGTCCATCAAAGCAACGGCCTCGGTCGTCTACGACACATCTGTGGTTGATTATA
GTTCTGCTATCTCGGTGTTTCCTGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTGGTTGGGAAAATATGTTTCCAGAAGTAAGGCTTCAGCAGGCTTCACTTAAC
AATCAAAACCCCGTCGCTTCTTCAGAGGAGATTGATAGAGAATATCTTGATTATGCCGATTCAAAGACTGTTTTCCCAGGAGAGGCTTGCGATGATCTTGGTGGAGAGTT
CTGTGAACCTGAGTTCCTAAATGGCGTTTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCATCCAAATCTCAAAACCTTATTTACAACATATCATCAAAATCACAATGCAGGCTGTTCTTAGCATTGCTGTTCCTTCCCTTCTCCCCAGCTCAACACTTTCCAG
TAATAAACCTTCTCACTTCCCTTTGATCACATTTTCTTCTCACTCATCCCGTCGCTCGTCCATCAAAGCAACGGCCTCGGTCGTCTACGACACATCTGTGGTTGATTATA
GTTCTGCTATCTCGGTGTTTCCTGCAGAAGCATGTGAGACAATAGGTGGAGAGGCATGTGGTTGGGAAAATATGTTTCCAGAAGTAAGGCTTCAGCAGGCTTCACTTAAC
AATCAAAACCCCGTCGCTTCTTCAGAGGAGATTGATAGAGAATATCTTGATTATGCCGATTCAAAGACTGTTTTCCCAGGAGAGGCTTGCGATGATCTTGGTGGAGAGTT
CTGTGAACCTGAGTTCCTAAATGGCGTTTTCTAG
Protein sequenceShow/hide protein sequence
MLIQISKPYLQHIIKITMQAVLSIAVPSLLPSSTLSSNKPSHFPLITFSSHSSRRSSIKATASVVYDTSVVDYSSAISVFPAEACETIGGEACGWENMFPEVRLQQASLN
NQNPVASSEEIDREYLDYADSKTVFPGEACDDLGGEFCEPEFLNGVF