| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6598510.1 DNA-directed RNA polymerase I subunit RPA12, partial [Cucurbita argyrosperma subsp. sororia] | 1.60e-80 | 88.57 | Show/hide |
Query: LVTGSRPDKSSLGRKLSGNRQAPLMAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERR
L + SRPDKSSL + G P MAYSRGHDFLFCNLCGTMLSF STKYVECP CKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQL+KERR
Subjt: LVTGSRPDKSSLGRKLSGNRQAPLMAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERR
Query: RCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
RCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
Subjt: RCEKCGNDEAWFESRQMRSADEGQTTFYTCTKCHHQTREN
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| XP_004143007.1 DNA-directed RNA polymerase I subunit RPA12 isoform X1 [Cucumis sativus] | 2.28e-78 | 100 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_008445334.1 PREDICTED: DNA-directed RNA polymerase I subunit RPA12-like [Cucumis melo] | 7.26e-75 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECP CKS+RSAKEI GREISYTVTAEEIRKQLGISLI EEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_022144336.1 DNA-directed RNA polymerase I subunit RPA12-like [Momordica charantia] | 1.03e-74 | 95.69 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECP CKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEK+QL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| XP_023546814.1 DNA-directed RNA polymerase I subunit RPA12-like [Cucurbita pepo subsp. pepo] | 1.79e-75 | 97.41 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECP CKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LKC4 DNA-directed RNA polymerase subunit | 1.10e-78 | 100 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A1S3BBZ4 DNA-directed RNA polymerase subunit | 3.51e-75 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSFCSTKYVECP CKS+RSAKEI GREISYTVTAEEIRKQLGISLI EEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1CTE6 DNA-directed RNA polymerase subunit | 4.99e-75 | 95.69 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECP CKSRRSAKEI+GREISYTVTAEEIRKQLGISLIDEEK+QL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1HDS4 DNA-directed RNA polymerase subunit | 1.01e-74 | 96.55 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYS GHDFLFCNLCGTMLSF STKYVECP CKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| A0A6J1KC19 DNA-directed RNA polymerase subunit | 1.43e-74 | 95.69 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
MAYSRGHDFLFCNLCGTMLSF STKYVECP CKSRRSAK I+GREISYTVTAEEIRKQLGISLIDEEKMQL+KERRRCEKCGNDEAWFESRQMRSADEGQ
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQ
Query: TTFYTCTKCHHQTREN
TTFYTCTKCHHQTREN
Subjt: TTFYTCTKCHHQTREN
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O94703 DNA-directed RNA polymerase I subunit RPA12 | 4.6e-10 | 30.63 | Show/hide |
Query: LFCNLCGTMLSFCSTKYVECPSCK----SRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
+FC+ CG +L + ++ C C+ S + A +V + S + ++ + I ++ +K + A +C KCGND F + Q+RSADEG T FY
Subjt: LFCNLCGTMLSFCSTKYVECPSCK----SRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYT
Query: CTKCHHQTREN
C +C ++ N
Subjt: CTKCHHQTREN
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| Q1RMP0 DNA-directed RNA polymerase I subunit RPA12 | 1.6e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q1XHV8 DNA-directed RNA polymerase I subunit RPA12 | 2.1e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q5TM50 DNA-directed RNA polymerase I subunit RPA12 | 1.2e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Q9P1U0 DNA-directed RNA polymerase I subunit RPA12 | 2.1e-10 | 33.64 | Show/hide |
Query: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
D FC+ CG++L + V C C + ++ G+ + +V ++ + +S+ + + Q RRC +CG++ + +RQMRSADEGQT FYTC
Subjt: DFLFCNLCGTMLSFCSTK-YVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQTTFYTC
Query: TKCHHQTREN
T C Q +E+
Subjt: TKCHHQTREN
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G01210.1 DNA-directed RNA polymerase, subunit M, archaeal | 8.3e-07 | 30.7 | Show/hide |
Query: FCNLCGTMLS---------FCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
FC CG +L FCST CP + EI +++ ++K + + ++ A+ C +CG+D+A+F+S Q+RSADE ++
Subjt: FCNLCGTMLS---------FCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
Query: TFYTCTKCHHQTRE
FY C KC RE
Subjt: TFYTCTKCHHQTRE
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| AT1G20065.1 FUNCTIONS IN: molecular_function unknown | 7.5e-16 | 59.68 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGIS
M SR D LFCNLCGTML STKY ECP C++ R+ KEI+ + ++YTVT E+IR++LGIS
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGIS
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| AT1G20065.2 FUNCTIONS IN: molecular_function unknown | 3.9e-12 | 58.49 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAE
M SR D LFCNLCGTML STKY ECP C++ R+ KEI+ + ++YTVT E
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAE
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| AT3G25940.1 TFIIB zinc-binding protein | 2.8e-31 | 55.93 | Show/hide |
Query: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEE---KMQLAKERRRCEKCGNDEAWFESRQMRSAD
M SR +FLFCNLCGTML STKY ECP CK+ R+AK+I+ +EI+YTV+AE+IR++LGISL E+ + +L K ++ CEKC + E + +RQ RSAD
Subjt: MAYSRGHDFLFCNLCGTMLSFCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEE---KMQLAKERRRCEKCGNDEAWFESRQMRSAD
Query: EGQTTFYTCTKCHHQTRE
EGQTT+YTC C H+ E
Subjt: EGQTTFYTCTKCHHQTRE
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| AT4G07950.1 DNA-directed RNA polymerase, subunit M, archaeal | 8.3e-07 | 30.7 | Show/hide |
Query: FCNLCGTMLS---------FCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
FC CG +L FCST CP + EI +++ ++K + + ++ A+ C +CG+D+A+F+S Q+RSADE ++
Subjt: FCNLCGTMLS---------FCSTKYVECPSCKSRRSAKEIVGREISYTVTAEEIRKQLGISLIDEEKMQLAKERRRCEKCGNDEAWFESRQMRSADEGQT
Query: TFYTCTKCHHQTRE
FY C KC RE
Subjt: TFYTCTKCHHQTRE
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