; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G6809 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G6809
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
DescriptionNucleic acid-binding, OB-fold-like protein
Genome locationctg1522:235111..240392
RNA-Seq ExpressionCucsat.G6809
SyntenyCucsat.G6809
Gene Ontology termsNA
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142984.1 uncharacterized protein At4g28440 [Cucumis sativus]6.62e-92100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
XP_022131585.1 uncharacterized protein At4g28440-like [Momordica charantia]2.59e-8997.08Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQ RQMRIAECLVGDETGMIIFTARNDQVD+MKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
XP_022951207.1 uncharacterized protein At4g28440-like [Cucurbita moschata]1.28e-8997.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
XP_022961781.1 uncharacterized protein At4g28440-like [Cucurbita moschata]5.23e-8997.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTL VKVVN KMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
XP_038883981.1 uncharacterized protein At4g28440 [Benincasa hispida]7.74e-9198.54Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTK+DQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA FTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
TrEMBL top hitse value%identityAlignment
A0A0A0LNA1 Uncharacterized protein3.20e-92100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
A0A1S3BA24 uncharacterized protein At4g28440 isoform X13.20e-92100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
A0A5A7V0K6 Nucleic acid-binding protein3.20e-92100Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
A0A6J1GH14 uncharacterized protein At4g28440-like6.22e-9097.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
A0A6J1KS21 uncharacterized protein At4g28440-like6.22e-9097.81Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL
        MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATI LRNAKIDMFKGSMRL
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRL

Query:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
        AVDRWGRVEVTEPA+FTVKE+NNLSLIEYELVNVVEE
Subjt:  AVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVEE
SwissProt top hitse value%identityAlignment
O49453 Uncharacterized protein At4g284404.4e-4466.67Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAV
        RKPVF KV+QL+PGT+GHTLTVKV+   +V+   +K RP    +R     RI ECL+GDETG I+FTARNDQVDLMK GAT+ LRN++IDMFKG+MRL V
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVL---QKGRPDGPQAR---QMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAV

Query:  DRWGRVEVTEPANFTVKEDNNLSLIEYELVNV
        D+WGR+E T  A+FTVKEDNNLSL+EYEL+NV
Subjt:  DRWGRVEVTEPANFTVKEDNNLSLIEYELVNV
Arabidopsis top hitse value%identityAlignment
AT1G10590.1 Nucleic acid-binding, OB-fold-like protein4.7e-5779.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPANFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP + TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPANFTVKEDNNLSLIEYELVNV
AT1G10590.2 Nucleic acid-binding, OB-fold-like protein4.7e-5779.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPANFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP + TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPANFTVKEDNNLSLIEYELVNV
AT1G10590.3 Nucleic acid-binding, OB-fold-like protein4.7e-5779.56Show/hide
Query:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM
        MAE+   LRKPVFTKV++LRPGT+GH+L VKVVNTKMV+Q+  GRP GPQ+RQMRIAECLVGDETG+IIFTARNDQVD+MKEG+ +TLRNAKIDM+KGSM
Subjt:  MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK--GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSM

Query:  RLAVDRWGRVEVT-EPANFTVKEDNNLSLIEYELVNV
        RLAVDRWGRVEV  EP + TVK+DNNLSLIEYELV+V
Subjt:  RLAVDRWGRVEVT-EPANFTVKEDNNLSLIEYELVNV
AT1G23750.1 Nucleic acid-binding, OB-fold-like protein1.1e-6182.48Show/hide
Query:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMR
        MA+S K GL+KP FTKVDQLRPGTSGH + VK+V+TKMVLQKGR DGPQARQ+RI+EC+VGDETG+I+FTARNDQVDLMKEG+T+TLRNAKIDM+KGSMR
Subjt:  MAES-KPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMR

Query:  LAVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVE
        LAVD+WGRVEVTEPA+F VKED N+SLIEYELVNVVE
Subjt:  LAVDRWGRVEVTEPANFTVKEDNNLSLIEYELVNVVE
AT2G33845.1 Nucleic acid-binding, OB-fold-like protein2.5e-5075.38Show/hide
Query:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGR
        +KPVF KVDQL+PGTSGHTLTVKVV+   V QK G       R  RI+ECLVGDET  I+FTARNDQV+LMK GAT+ LRNAKIDMFKGSMRLAVD+WGR
Subjt:  RKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQK-GRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGR

Query:  VEVTEPANFTVKEDNNLSLIEYELVNVVEE
        +E TEPA+ TVKEDNNLSL+EYELVNVVEE
Subjt:  VEVTEPANFTVKEDNNLSLIEYELVNVVEE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCAGGCACCAGTGGCCATACTCTTACAGTCAAAGTTGTGAATACGAAGAT
GGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCCGAATGCTTAGTGGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATC
AAGTGGATTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGGCTTGCTGTAGACAGGTGGGGTCGAGTTGAAGTT
ACTGAGCCTGCCAATTTCACTGTTAAGGAAGATAACAATCTTTCGCTCATTGAATATGAGCTCGTGAATGTTGTGGAAGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAATCAAAACCAGGACTAAGGAAACCAGTATTTACCAAGGTTGACCAACTTCGGCCAGGCACCAGTGGCCATACTCTTACAGTCAAAGTTGTGAATACGAAGAT
GGTATTGCAGAAGGGTCGTCCTGATGGTCCTCAAGCCCGTCAGATGCGAATTGCCGAATGCTTAGTGGGTGATGAAACTGGAATGATCATATTTACCGCCAGAAATGATC
AAGTGGATTTGATGAAAGAAGGTGCTACTATAACCCTGCGCAATGCTAAGATAGACATGTTTAAAGGATCAATGAGGCTTGCTGTAGACAGGTGGGGTCGAGTTGAAGTT
ACTGAGCCTGCCAATTTCACTGTTAAGGAAGATAACAATCTTTCGCTCATTGAATATGAGCTCGTGAATGTTGTGGAAGAGTGA
Protein sequenceShow/hide protein sequence
MAESKPGLRKPVFTKVDQLRPGTSGHTLTVKVVNTKMVLQKGRPDGPQARQMRIAECLVGDETGMIIFTARNDQVDLMKEGATITLRNAKIDMFKGSMRLAVDRWGRVEV
TEPANFTVKEDNNLSLIEYELVNVVEE