; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cucsat.G69 (gene) of Cucumber (B10) v3 genome

Gene IDCucsat.G69
OrganismCucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Descriptionbinding partner of ACD11 1 isoform X2
Genome locationctg1:1020781..1023648
RNA-Seq ExpressionCucsat.G69
SyntenyCucsat.G69
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053025.1 binding partner of ACD11 1 isoform X2 [Cucumis melo var. makuwa]6.15e-18498.59Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        M IKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFN+VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

XP_004148750.1 binding partner of ACD11 1 isoform X1 [Cucumis sativus]5.76e-188100Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

XP_008448657.1 PREDICTED: binding partner of ACD11 1 isoform X1 [Cucumis melo]5.51e-18698.94Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        MSIKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFN+VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

XP_008448658.1 PREDICTED: binding partner of ACD11 1 isoform X2 [Cucumis melo]2.24e-18598.59Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        M IKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFN+VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

XP_011650336.1 binding partner of ACD11 1 isoform X2 [Cucumis sativus]2.34e-18799.65Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        M IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

TrEMBL top hitse value%identityAlignment
A0A0A0L545 RRM domain-containing protein2.79e-188100Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

A0A1S3BK74 binding partner of ACD11 1 isoform X21.09e-18598.59Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        M IKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFN+VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

A0A1S3BK81 binding partner of ACD11 1 isoform X12.67e-18698.94Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        MSIKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFN+VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

A0A5A7UH68 Binding partner of ACD11 1 isoform X22.98e-18498.59Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        M IKTV+VSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVAT DKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IMKNRYVMSGTSWVADTFN+VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

A0A6J1CV14 binding partner of ACD11 1-like isoform X11.27e-17092.25Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA
        MSIKTV+VSNVSLGAS+RD+KEFFSFSGDIEYLEMQSE+ERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPP A GT  PGAA
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAA

Query:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA
        ESAF+KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQL+STASAKVATFDKKIGFTEKISAGT LVSDKVREVDQKFQVSEKTKSAFAVAE KVSNAGSA
Subjt:  ESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSA

Query:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL
        IM NR+VMSGTSWVAD FN+VAKAAGEVGQKTKEK V +EEEQKKKTVEDFA+VHLSESPKAA+APPE PQQRPKPEPAQGLIL
Subjt:  IMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL

SwissProt top hitse value%identityAlignment
P87216 Protein vip17.1e-0425.68Show/hide
Query:  VQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFR
        V V+N+S   +E+ I +FFSF G +  +  +   E +QTA + F+     +TA+LL  A +    + IT          A +     G     AA    +
Subjt:  VQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFR

Query:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSL------VSDKVREVDQKFQVSEK
            ++S +L++G+ L    L  +   D+ + ++S          K  G  E   +G         V++K  EVD KF +S+K
Subjt:  KAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSL------VSDKVREVDQKFQVSEK

Q9LFD5 Binding partner of ACD11 13.3e-7057.58Show/hide
Query:  IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-AE
        +++V+V N+S GA+E DIKEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + AE
Subjt:  IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK
        MKNRYV++G SW A  FNRVA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.6e-9670.7Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PPAPGTKPPGA
        M++ TV+VSNVSLGA++RD+KEFFSFSGDI YLE QSETER++ AYVTFKD QGAETAVLLSGATIVD SV +++ PDY+L PEA A   P    K P A
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAP-PPAPGTKPPGA

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS
         +S  RKAEDVVS MLAKGFILGKDA+  AK+ DEKHQLTSTASAKVA+FDKKIGFT+KI+ GT +V +KVREVDQK+QVSEKTKSA A AE+ VSNAGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS

Query:  AIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQ
        AIMKNRYV++G +WV   FN+VAKAA EVGQK KEKV + EEE K+K V++FA+VHLSESPKAAS+  E  ++
Subjt:  AIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQ

AT5G16840.1 binding partner of acd11 12.4e-7157.58Show/hide
Query:  IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-AE
        +++V+V N+S GA+E DIKEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + AE
Subjt:  IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK
        MKNRYV++G SW A  FNRVA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK

AT5G16840.2 binding partner of acd11 12.8e-7258.33Show/hide
Query:  IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-AE
        +++V+V N+S GA+E DIKEFFSFSG++E +++QS  E S  AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + AE
Subjt:  IKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-AE

Query:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI
        S  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGSA+
Subjt:  SAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAI

Query:  MKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK
        MKNRYV++G SW A  FNRVA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  MKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK

AT5G16840.3 binding partner of acd11 16.3e-7257.52Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-
        M++++V+V N+S GA+E DIKEFFSFSG++E +++QS      +AYVTFK+ QGAETAVLLSGA+I D SV I L P+Y       +PP AP  +   + 
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGA-

Query:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS
        AES  +KAEDVVS MLAKGFILGKDA+  AKAFDEKH  TSTA+A VA+ D+KIG ++K++AGTSLV++K++ VDQ FQV+E+TKS +A AE+ VS+AGS
Subjt:  AESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGS

Query:  AIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK
        A+MKNRYV++G SW A  FNRVA+AAGEVGQKTKEKV   +  Q    +++  E ++ +H SE  K
Subjt:  AIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVTEEEQ----KKKTVEDFAKVHLSESPK

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-8863.99Show/hide
Query:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPA-----PGTK
        MS+ TV+VSNVSL A+ERD+KEFFSFSGDI YLE QSE + S+ AYVTFKD QGAETAVLL+G+TIVD SV +T+ PDY+LPP+A A   +       + 
Subjt:  MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPA-----PGTK

Query:  PPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS
        P     S FRKAEDVVSGM++KGF+LGKDA+  AK+ DEKHQLTSTASA+V +FDK+IGFTEKI+ GT++VS+KV+EVDQKFQV+EKTKSA A AE+ VS
Subjt:  PPGAAESAFRKAEDVVSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVS

Query:  NAGSAIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVT--EEEQKKKTVEDFAKVHLSESPKAASAPPEE---PQQRPKP
        NAGSAIMKNRYV++G +WV   FNRV+KAA EVGQK KEKV +   EEE+KKK V++ A VHL+ESPKA     ++   P+ + +P
Subjt:  NAGSAIMKNRYVMSGTSWVADTFNRVAKAAGEVGQKTKEKVVVT--EEEQKKKTVEDFAKVHLSESPKAASAPPEE---PQQRPKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTAAGACTGTCCAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTTTCTGGTGACATTGAATATCTTGAAATGCAGAG
TGAAACTGAACGGTCTCAAACTGCTTATGTAACATTTAAGGACGCGCAAGGGGCAGAGACTGCTGTTCTTTTGTCCGGAGCAACTATAGTGGATCTTTCTGTCAACATTA
CTCTGTGTCCCGATTATGAGCTCCCTCCTGAAGCTACTGCACCACCTCCTGCCCCTGGAACTAAGCCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTG
GTTAGCGGGATGCTAGCCAAGGGCTTTATCTTGGGCAAAGATGCACTCAACTCGGCTAAGGCATTTGATGAGAAACACCAGTTAACTTCCACGGCTTCTGCTAAAGTTGC
TACATTTGATAAAAAAATTGGGTTCACCGAGAAAATTAGCGCTGGTACATCGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACAA
AATCTGCATTTGCAGTTGCAGAAGAAAAGGTTAGCAACGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTGCTGATACTTTCAATAGG
GTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTTGTGGTGACAGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTCTC
GGAATCCCCAAAAGCAGCATCGGCACCCCCTGAGGAGCCTCAACAACGTCCAAAACCCGAACCAGCTCAAGGTCTGATCCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTAAGACTGTCCAAGTCAGCAATGTCTCCCTGGGAGCGTCTGAACGAGATATCAAGGAGTTTTTTTCCTTTTCTGGTGACATTGAATATCTTGAAATGCAGAG
TGAAACTGAACGGTCTCAAACTGCTTATGTAACATTTAAGGACGCGCAAGGGGCAGAGACTGCTGTTCTTTTGTCCGGAGCAACTATAGTGGATCTTTCTGTCAACATTA
CTCTGTGTCCCGATTATGAGCTCCCTCCTGAAGCTACTGCACCACCTCCTGCCCCTGGAACTAAGCCACCTGGTGCTGCTGAATCTGCCTTTCGGAAAGCAGAGGATGTG
GTTAGCGGGATGCTAGCCAAGGGCTTTATCTTGGGCAAAGATGCACTCAACTCGGCTAAGGCATTTGATGAGAAACACCAGTTAACTTCCACGGCTTCTGCTAAAGTTGC
TACATTTGATAAAAAAATTGGGTTCACCGAGAAAATTAGCGCTGGTACATCGTTGGTGAGCGACAAAGTTCGGGAAGTAGACCAGAAGTTTCAGGTTTCTGAGAAGACAA
AATCTGCATTTGCAGTTGCAGAAGAAAAGGTTAGCAACGCTGGATCTGCCATTATGAAAAACCGATATGTAATGAGCGGGACTAGCTGGGTTGCTGATACTTTCAATAGG
GTAGCCAAGGCAGCTGGAGAAGTTGGTCAGAAAACAAAAGAGAAAGTTGTGGTGACAGAAGAAGAACAGAAAAAGAAGACGGTTGAAGATTTTGCTAAGGTTCATCTCTC
GGAATCCCCAAAAGCAGCATCGGCACCCCCTGAGGAGCCTCAACAACGTCCAAAACCCGAACCAGCTCAAGGTCTGATCCTCTGA
Protein sequenceShow/hide protein sequence
MSIKTVQVSNVSLGASERDIKEFFSFSGDIEYLEMQSETERSQTAYVTFKDAQGAETAVLLSGATIVDLSVNITLCPDYELPPEATAPPPAPGTKPPGAAESAFRKAEDV
VSGMLAKGFILGKDALNSAKAFDEKHQLTSTASAKVATFDKKIGFTEKISAGTSLVSDKVREVDQKFQVSEKTKSAFAVAEEKVSNAGSAIMKNRYVMSGTSWVADTFNR
VAKAAGEVGQKTKEKVVVTEEEQKKKTVEDFAKVHLSESPKAASAPPEEPQQRPKPEPAQGLIL