CuGenDBv2

Gene ID	Cucsat.G6928
Organism	Cucumis sativus L. var. sativus cv. B10 (Cucumber (B10) v3)
Description	Coilin
Genome location	ctg1522:453659..458895
RNA-Seq Expression	Cucsat.G6928
Synteny	Cucsat.G6928
Gene Ontology terms	GO:0000387 - spliceosomal snRNP assembly (biological process) GO:0015030 - Cajal body (cellular component) GO:0030619 - U1 snRNA binding (molecular function) GO:0030620 - U2 snRNA binding (molecular function)
InterPro domains	IPR024822 - Coilin IPR031722 - Coilin, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0061051.1 coilin-like isoform X1 [Cucumis melo var. makuwa]

0.0

91.35

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNV A DK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT
        MEELVNKCTDYKNEADAVDEPY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHT
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT

Query:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD
        D S+SN+QK  KFSSP+KDKR+MMRKQVKT+KKKVQQQRVEKSN KLPDENY+EDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Subjt:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD

Query:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
         IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
Subjt:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK

Query:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW
        IMVIPVPEYPFVYK AMND ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSW
Subjt:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW

Query:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        KKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

XP_004143057.1 coilin isoform X3 [Cucumis sativus]

0.0

99.46

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
        MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD

Query:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
        TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
Subjt:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI

Query:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
        IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
Subjt:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI

Query:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
        MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
Subjt:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK

Query:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        WEDRTSVR   GNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
Subjt:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

XP_008444385.1 PREDICTED: coilin-like isoform X1 [Cucumis melo]

0.0

91.71

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNV A DK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT
        MEELVNKCTDYKNEADAVDEPY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHT
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT

Query:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD
        D S+SN+QKLQKFSSP+KDKR+MMRKQVKT+KKKVQQQRVEKSN KLPDENY+EDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Subjt:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD

Query:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
         IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
Subjt:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK

Query:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW
        IMVIPVPEYPFVYK AMND ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSW
Subjt:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW

Query:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        KKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

XP_011649500.1 coilin isoform X1 [Cucumis sativus]

0.0

100

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
        MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD

Query:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
        TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
Subjt:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI

Query:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
        IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
Subjt:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI

Query:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
        MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
Subjt:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK

Query:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
Subjt:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

XP_011649501.1 coilin isoform X2 [Cucumis sativus]

0.0

99.82

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
        MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD

Query:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
        TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQ EANQIVHPGQASMDI
Subjt:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI

Query:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
        IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
Subjt:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI

Query:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
        MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
Subjt:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK

Query:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
Subjt:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LQQ3 Coilin

0.0

100

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
        MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD

Query:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
        TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI
Subjt:  TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDI

Query:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
        IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI
Subjt:  IRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKI

Query:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
        MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK
Subjt:  MVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKK

Query:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
Subjt:  WEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

A0A1S3BA97 Coilin

0.0

91.71

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNV A DK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT
        MEELVNKCTDYKNEADAVDEPY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHT
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT

Query:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD
        D S+SN+QKLQKFSSP+KDKR+MMRKQVKT+KKKVQQQRVEKSN KLPDENY+EDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Subjt:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD

Query:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
         IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
Subjt:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK

Query:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW
        IMVIPVPEYPFVYK AMND ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSW
Subjt:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW

Query:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        KKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

A0A1S3BAZ0 Coilin

0.0

91.53

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNV A DK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT
        MEELVNKCTDYKNEADAVDEPY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHT
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT

Query:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD
        D S+SN+QKLQKFSSP+KDKR+MMRKQVKT+KKKVQQQRVEKSN KLPDENY+EDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQ EANQIVHP QASMD
Subjt:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD

Query:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
         IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
Subjt:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK

Query:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW
        IMVIPVPEYPFVYK AMND ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSW
Subjt:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW

Query:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        KKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

A0A1S3BB08 Coilin

0.0

91.17

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Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNV A DK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT
        MEELVNKCTDYKNEADAVDEPY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHT
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT

Query:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD
        D S+SN+QKLQKFSSP+KDKR+MMRKQVKT+KKKVQQQRVEKSN KLPDENY+EDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Subjt:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD

Query:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
         IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
Subjt:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK

Query:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW
        IMVIPVPEYPFVYK AMND ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSW
Subjt:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW

Query:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        KKW+D TSVR   GN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

A0A5A7V5I3 Coilin

0.0

91.35

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Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK
        MNSGTVRIRL+FE+GQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLD+F LR+ACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKN DNV A DK
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADK

Query:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT
        MEELVNKCTDYKNEADAVDEPY+LLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFR EHNGRFQHKV LSEK L++KHK S+GHT
Subjt:  MEELVNKCTDYKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKV-LSEKSLVEKHKSSSGHT

Query:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD
        D S+SN+QK  KFSSP+KDKR+MMRKQVKT+KKKVQQQRVEKSN KLPDENY+EDSEQLAGSSDD+EIVPVVIRPGHVRFLPLGQAEANQIVHP QASMD
Subjt:  DTSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMD

Query:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
         IRLNGMAVKNVRNRGQRKSSSWTSNC NCEGQSSKPQA+KGLSTMN PIDF+KLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK
Subjt:  IIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANK

Query:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW
        IMVIPVPEYPFVYK AMND ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFE  AGNIREASG KQSWNKWENHST PKQSWNK GENHPKPPKQSW
Subjt:  IMVIPVPEYPFVYKAAMND-ESIKHPYAEDGSLKTDYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSW

Query:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP
        KKW+D TSVRVISGN KEN WDEILQAF AKKA L NEVRWRTGE KAWEGAHDP
Subjt:  KKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGAHDP

SwissProt top hits

e value

%identity

Alignment

P38432 Coilin

4.8e-04

22.45

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Query:  RNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPI-----DFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMV----
        R RG   S     +  N   Q      K   + +  P+     D+  L   A+ P+ G+ IA++L+EL+S+++P++S ++ G++L   PE  ++ +    
Subjt:  RNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMNPPI-----DFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMV----

Query:  -IPVPEYP----FVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIV
         +P    P     VY      E +++   ++  +   +  LID +++
Subjt:  -IPVPEYP----FVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIV

Q09003 Coilin

1.1e-05

23.15

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Query:  DFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPE--------YPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDI
        D+  L   A+ P+ G +IA++L+E+S  +TPE+S ++ GK+L   P   +I +  + +        +  VY++   ++ +++   ++  +  ++++LI+ 
Subjt:  DFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPE--------YPFVYKAAMNDESIKHPYAEDGSLKTDYSSLIDI

Query:  KIVEHKNS
        +++  K S
Subjt:  KIVEHKNS

Q5SU73 Coilin

1.6e-04

23.03

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Query:  DIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMN----------PPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVG
        D++   G+  + VR RG+ +  +  S   N   +S K +    + T +          P  D+  L   A+ P+ G+ IA++L+EL+S ++P++S ++ G
Subjt:  DIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQAKKGLSTMN----------PPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVG

Query:  KVLWCKPEANKIMV-----IPVPEYP----FVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIV
        K+L   PE  ++ +     +P  + P     VY      E +++   ++  +   +  LID +++
Subjt:  KVLWCKPEANKIMV-----IPVPEYP----FVYKAAMNDESIKHPYAEDGSLKTDYSSLIDIKIV

Q8RWK8 Coilin

1.8e-48

29.83

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Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILL--KSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------
        M    VR+RL+FE  ++LSK  +K GL RSW++L  K H  TIS+FS ++   F L  ACPHGL LSM+GFVLPPFE + +LKDKDIV VKK        
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILL--KSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------

Query:  -------NVDNVTAADKM------------EELVNKCTDYKNEA---DAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALK--------------TLHSS
               NV N    ++             EE   +   Y++E+   +  +E  E + + + +    +  K  S+KRK  K               + S+
Subjt:  -------NVDNVTAADKM------------EELVNKCTDYKNEA---DAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALK--------------TLHSS

Query:  KMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD---TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLP----
         +KKK+   +        +       K +++     + + S  H D    S   ++   + +   K KR+ +R++ K +K+++ Q ++  +  + P    
Subjt:  KMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD---TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLP----

Query:  -----DENYIE--DSEQLAGSSD--DKEIVPVVIRPGHVRFLPL-GQAEANQIVHPGQASMDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQ
              E + E  +++Q    SD    E+VPV +RPGH+RF PL G  EA+    P    ++ +  NG   K    +   + S ++        + +  Q
Subjt:  -----DENYIE--DSEQLAGSSD--DKEIVPVVIRPGHVRFLPL-GQAEANQIVHPGQASMDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQ

Query:  AKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDESIKHP----YAEDGSLKT
          +  +  N PID+++L       ++GD+IAYRLIEL+S+WTPE+SSFRVGK+ +  P++  + ++PV E+P   K   +D+    P    Y EDGSL+ 
Subjt:  AKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDESIKHP----YAEDGSLKT

Query:  DYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKL
        ++S+L+D++ V+  +S   E     + E                 P QS         K PK S  K E +T  +    NG+ + W+E+ +A  AKKA L
Subjt:  DYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKL

Arabidopsis top hits

e value

%identity

Alignment

AT1G13030.1 sphere organelles protein-related

1.3e-49

29.83

Show/hide

Query:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILL--KSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------
        M    VR+RL+FE  ++LSK  +K GL RSW++L  K H  TIS+FS ++   F L  ACPHGL LSM+GFVLPPFE + +LKDKDIV VKK        
Subjt:  MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILL--KSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKK--------

Query:  -------NVDNVTAADKM------------EELVNKCTDYKNEA---DAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALK--------------TLHSS
               NV N    ++             EE   +   Y++E+   +  +E  E + + + +    +  K  S+KRK  K               + S+
Subjt:  -------NVDNVTAADKM------------EELVNKCTDYKNEA---DAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALK--------------TLHSS

Query:  KMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD---TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLP----
         +KKK+   +        +       K +++     + + S  H D    S   ++   + +   K KR+ +R++ K +K+++ Q ++  +  + P    
Subjt:  KMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTD---TSISNEQKLQKFSSPDKDKRKMMRKQVKTKKKKVQQQRVEKSNRKLP----

Query:  -----DENYIE--DSEQLAGSSD--DKEIVPVVIRPGHVRFLPL-GQAEANQIVHPGQASMDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQ
              E + E  +++Q    SD    E+VPV +RPGH+RF PL G  EA+    P    ++ +  NG   K    +   + S ++        + +  Q
Subjt:  -----DENYIE--DSEQLAGSSD--DKEIVPVVIRPGHVRFLPL-GQAEANQIVHPGQASMDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCEGQSSKPQ

Query:  AKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDESIKHP----YAEDGSLKT
          +  +  N PID+++L       ++GD+IAYRLIEL+S+WTPE+SSFRVGK+ +  P++  + ++PV E+P   K   +D+    P    Y EDGSL+ 
Subjt:  AKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDESIKHP----YAEDGSLKT

Query:  DYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKL
        ++S+L+D++ V+  +S   E     + E                 P QS         K PK S  K E +T  +    NG+ + W+E+ +A  AKKA L
Subjt:  DYSSLIDIKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTCGGGGACTGTGAGAATACGTTTGCTTTTCGAACAGGGGCAGCTACTGAGCAAGTCTCACAGGAAAAATGGACTCAAACGGAGTTGGATTCTTCTCAAATCTCA
TCTCCCTACCATTTCCGACTTCTCTTCCTATCTTCTTGATTACTTCTTCCTTCGTACTGCTTGCCCACATGGCCTCATTCTTTCTATGGATGGCTTTGTTCTACCTCCTT
TTGAACCTACTTCTATTTTGAAGGATAAAGATATTGTTAGGGTTAAGAAGAATGTGGACAATGTGACTGCGGCTGACAAGATGGAAGAGCTTGTGAACAAGTGCACTGAC
TACAAAAATGAAGCAGATGCAGTTGATGAACCTTATGAACTTCTGCGTCAGTTGGAAGACACTTTGGATGCGGGAAGCGTCAAGAAAACACTTTCCAGCAAGAGGAAGGC
ACTGAAAACACTTCACAGTTCAAAGATGAAGAAAAAAAGAGTTGTTCCAACTTCCAAATATTTGAAGTTTCGTACAGAGCATAATGGTAGATTCCAGCACAAAGTTCTTT
CTGAAAAGAGTCTGGTCGAGAAGCACAAATCATCCAGCGGTCATACCGATACAAGTATCTCCAACGAGCAAAAGCTTCAAAAGTTTTCTTCTCCGGACAAGGATAAAAGG
AAAATGATGAGGAAACAGGTCAAAACTAAGAAGAAAAAGGTACAGCAACAAAGAGTTGAAAAGAGTAACCGTAAGTTACCTGATGAGAATTACATTGAGGACTCTGAACA
GCTAGCTGGCAGTAGTGATGATAAAGAAATTGTACCGGTGGTAATTAGACCCGGCCATGTTCGTTTTCTGCCTCTTGGTCAAGCAGAGGCAAACCAGATTGTCCATCCAG
GTCAAGCTTCAATGGACATCATACGGTTGAATGGGATGGCAGTTAAGAATGTAAGAAACAGGGGTCAAAGGAAGTCCTCATCTTGGACGAGTAATTGCAAGAACTGTGAA
GGACAAAGTTCTAAGCCGCAAGCTAAAAAAGGTTTATCAACTATGAACCCCCCGATTGACTTCGATAAGCTCAAACCTTGTGCTAGCTTGCCCGAGAGAGGTGATATAAT
TGCATATCGTTTAATAGAATTATCATCAACCTGGACTCCGGAACTTTCCTCCTTCAGAGTTGGAAAGGTATTGTGGTGTAAACCTGAAGCAAATAAGATTATGGTGATTC
CTGTTCCAGAATATCCATTTGTTTATAAGGCGGCAATGAATGATGAATCAATTAAACATCCATATGCAGAGGATGGATCTTTAAAGACAGATTACTCCTCACTCATTGAC
ATCAAAATCGTTGAGCATAAAAATTCAGTAGGTTTTGAAGCAACTGCTGGTAATATCAGAGAAGCATCTGGTACAAAACAAAGTTGGAACAAGTGGGAGAACCATTCCAC
TGCACCGAAACAAAGCTGGAACAAATTGGGGGAGAACCACCCCAAGCCACCAAAACAAAGCTGGAAAAAGTGGGAAGACCGTACCAGTGTACGAGTCATTTCAGGAAATG
GAAAGGAAAATGGATGGGATGAAATTCTCCAGGCTTTCGGGGCAAAGAAAGCTAAATTGTGCAATGAAGTTCGATGGAGAACAGGGGAGAATAAAGCTTGGGAAGGAGCT
CATGATCCATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MNSGTVRIRLLFEQGQLLSKSHRKNGLKRSWILLKSHLPTISDFSSYLLDYFFLRTACPHGLILSMDGFVLPPFEPTSILKDKDIVRVKKNVDNVTAADKMEELVNKCTD
YKNEADAVDEPYELLRQLEDTLDAGSVKKTLSSKRKALKTLHSSKMKKKRVVPTSKYLKFRTEHNGRFQHKVLSEKSLVEKHKSSSGHTDTSISNEQKLQKFSSPDKDKR
KMMRKQVKTKKKKVQQQRVEKSNRKLPDENYIEDSEQLAGSSDDKEIVPVVIRPGHVRFLPLGQAEANQIVHPGQASMDIIRLNGMAVKNVRNRGQRKSSSWTSNCKNCE
GQSSKPQAKKGLSTMNPPIDFDKLKPCASLPERGDIIAYRLIELSSTWTPELSSFRVGKVLWCKPEANKIMVIPVPEYPFVYKAAMNDESIKHPYAEDGSLKTDYSSLID
IKIVEHKNSVGFEATAGNIREASGTKQSWNKWENHSTAPKQSWNKLGENHPKPPKQSWKKWEDRTSVRVISGNGKENGWDEILQAFGAKKAKLCNEVRWRTGENKAWEGA
HDP

Cucsat.G6928 (gene) of Cucumber (B10) v3 genome